XLOC_008671 (gene) - C. hemisphaerica

Overview


Name	XLOC_008671
Unique Name	XLOC_008671
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000212:319685..327969-

gene from alignment at sc0000212:319685..327969-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_008671 ID=XLOC_008671|Name=XLOC_008671|organism=Clytia hemisphaerica|type=gene|length=8285bp|location=Sequence derived from alignment at sc0000212:319685..327969- (Clytia hemisphaerica)
GCAAAATCCAATGCCATCCAATTCATCGTTGACAACCAAATTTCCGATAT
TGTCGATTTGAAATGGCGATTCGTGAACCAACAACCAGAATCTCAATCAG
TGTCAACTGGCGAAATATCACCAGAAAGTAAAGATTTGGTTTTCGTTCAA
CCACGGAGCAAAAAGAACTTTAAATATAATTTCGATGATGAATTATTCAC
TCGCAGCTCTGGCGATTCACGAACTATTCAAGTTTTCGGTCAAGATTCTG
CCACTGAAGTTCAAGTCTTGTTAAACAAGAAACCACATTTAAATTTCGAT
TTGGATCAAGAGAACATCTCTCCAATTAATATTATCATTACATCATACCA
AGACAAAGACAAAGATAGCAAAGGTACCTGTTGGTTTTTTTCTCTCTTAT
AACTATGAATTAAGTTGGAGGCAAATCTACTTAATGTATAGCTGAATCCC
AGTATCATTGCGTTAATTCAATGGAAAGTCGTGAATTATTCACCGTAGGG
AATAAAATCTATTAGTTAAACTTTCAGTATCAATATTTTTTAGCTATACG
CAGTACATTTTTGGATAGAAAGATGGAAGTTTTTGCAAAATCTTATTTTT
TTTTGAATTTTTGGCTAAAATATTCCGAACATTTTGAATAACTTTCTTTT
ACATGAGATTTTTTTTCCATTTGATTTTAGGTCATGGAAAATTTTGACCT
TAATTTTCTTATAAAAAGATAAAACCTACCAGCATTTTAGGGCTCATTTC
TGTACATTCATACGTTTCCTTAACTCTTTATTTTTTACCTTTATTGTTTT
TCAGCGATTGATTATCCAATCAAGATTCGTCTTTCCAACAATGGAATCAA
TCAACCTTACATTCTCCGATGGAATTTCCAAATAGTCGATGATTCACTTT
CTTCAAATTCACCAAAAGAATTCACCATTGATCCTTCTAAGCCAGATAGC
CAAGAAGTAGATCTCATCATCAGAAGCACGAGACCNTAGTACTGCAACCT
TTTAGATATTTATCAAGCAATGAGGAATTGACAAACGAGGACATGAGAAA
GCCTCCACAAACCATTGTCATCACTAACGCGGGTAATTTATTTAGAAAGG
CTTTATTTTGCTTGAAACAGTAGGTTCGTTTGATTTTCTTCGATGTGTTT
GCAACACGAAATGCAGTAGATCCATGTCGTCGAATTGCGAACAAACGTTA
TGTCGAATTACTTAATTTGAGTAGAACATACTACACGCTTTTTTTTTATA
AGAATACACTTTATGAGAATATCCATGATGAAAATGGCCCAAAAATTAAG
AATATGCTAAGAATATCACCATCATGGAATTTTGAGACGTATGTACTAAA
TGTTAAATCTAGTCTGAACTAGGATTCTAACCTAAGAATGCTGTAAGAAT
ATTTTAGGATGATTTTCCCAAGAAAGTTAAGAATATCCATGATGAAATGG
ATTTACACCATTCTTGTAAAAAAAAAGCGTGTATTTCTTCCTGGAAATAG
TAACTAGAAGTTAGAGAAAAAAGTACAGAAGATAGATCGACAGGTTCCAG
AATGTCTTGCCCTTTATACAAGTCATTTATATACAGCCTTTTTTGAAGTG
AACCTCCACGTGTGAGCTAAAAATTGAGATAAAGCGCAAAAAAATTGAGT
TGCACCTTTGTTTTTCTCCTTTCAGCGAAATATTACTACGTGAATTTGAA
CATCGTCAACCAATTACAATCCNTTTCGGTCATATCTGAACAAAATCCTG
AATCACCAAAGACAGAATCGTTCATAATCCAACCATTAGATTTTACACTG
TCTCAACCTAGAGGTATATTGTCTTAATACTTCATAATAATTTTAATACT
ACCTTTACTTATTTTTCTCTGGTGATAATCAACGAGGGACTTTTGATCAA
GGCAAAAAAAGTCTTAATACTTGCTAAAAGGTTTCTACAGAGCGTTCTAT
AAATGACATTATACAAATTATATAAATTATACAAATGACAGCTTGAGAGT
AAATTCATAATTTAAACTTTTAAGTAATGTAAAAAAGTAAGGCGGAGGCA
AACCAGAGTCTCCTCTTTCGATAGTTATCCATCCGAAAGAAGAATAGGGC
GCAAACTTTTCTCCCTGAATTACTCCACTTACCCTTGATCTTTCTCTTTA
ATTACTGAGAACAAAGCAGAGAAGTATCAACTCGAAATTCACACCAACGA
ACCGTAGTCGAACGTTCTACCTTCTCACATTATGGTCACTATATACTTTA
AATCGAAAGCTCCTTTTAGCACTGATTACATTGTTTAACCATTTACGATA
TTTGTATTTTCTTTCTTTCAGAATTCCGATACGTTCTCATTTTCAATGCT
TTCAACAATGGACAAGAAGAAGCTACACTTTCTTTGGAAATTACTGACCG
ATATATCGCCAACTACCTTAGACCCTCCGATCCTTCGCCAAAAACCTACA
TAGCTTTACCCAACAGAAATGTTCAATACAACGTCGATTTCATTAGCTCA
AAACCTTTTGATGCGGGCACCTTAAAGAAAGCTATAAGAGTCGGTGCTAA
AGATTCAAATGGTCAGGATTTATTGGTCAATGGAAAATCAAATATTTTTT
TAGTACTGCAACCTTTTAGATATTTATCAAGCAATGAGGAATTGACAAAC
GAGGACATGAGAAAGCCTCCACAAACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTGAACCTCCACGTGTGAGCTAAAAATTGAGATAAAGCG
CAAAAAAATTGAGTTGCACCTTTGTTTTTCTCCTTTCAGCGAAATATTAC
TACGTGAATTTGAACATCGTCAACCAATTACAATCCCCAGTCCAGTTGTC
ATGGCGATATGCGCTCGTTATGGATAGTTACAAATTATTCACCAATGAGA
AACCAGTTCAAATAGGTGCCGATTCTAACAAAAAGATTTCTTTACGTTTT
GGCGCGCCATCAGTTGATCAGTCATTACCTAATCGCAATTTGATTGTTTT
CTACGCAACAAGCCAAAATGATCAAAACTCGGGCAGTGGTGCATTACTCA
TCAATGGTTTACCCACATTGAGTGCATCGTTTTCAGAACTTCAAGGTGTT
AATCGCATGATTGTGAATATTTCAAAACCAGAGGAAAATTTATACGCAGT
GAAACTCAACATCCGAAATCCAATGAAAACTACCGCTTACATCAAATGGG
AATTGAACACTGACCGATATCCAGATTTGAAACTTGCTCAAACGATCTCC
AAACAAGATATGTCGATTCAACCTGGAGACAATTTCAACCAAATTATTAG
CTTAAATATAACAGCTCCAATCACAGCTTTGAGCGTATTGAGNAAACTTG
CTCAAACGATGTCCAAACAAGATATGTCGATTCAACCTGGGGAAAATTTC
AACCAAATTATTAGCTTGAATATAAGAGCTTCACTCAAGAGTCCATCACA
AATGAAAAATGCAATCATCTTCAGAGCCTCACATGGACCTTGGAAAAACC
CAGCTTTCCTTAATGTAAAGAAGCAATTACCGACTGATTTACATTTGACA
ACAAACCCGAAAGATTTACCCGATTTCCCGATTAATATTTCCGATAGTGG
TAAGTTATTTATCAAATCATTTTTTTCGGTAAGAGGTTTTTTCGAGAGAT
TTAAATGTTAAGTCTACAGTATCTAGTTCCAGACTTCTTTTAGGGAAGCA
GTGTACTTTAGAAGATGAATTGTTCTATTCCAGCTGTCAATCAACGAACT
AGCTTGAGGTCCCCATAAAACCGTTCAATAGAAAACGTGATTAAAGGCCT
GTTTCCATCGATCGCGCGAGCGTGCACGCTAGGGCAAAATTTATCTGATA
TTCCGATGGCGGATTGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ACAATATGTATGTTTACATTTTTTTGTTTACTCAGCAGTTTTTCTCTTTC
TTGATTGGTTGAAAGATTATCGATTGAGATGTGCGCTCCTGTACGCTCAA
AAAAGTTCAAAATTTTCAGCGTAGAAAAGAGCACAAAAGCGTACAAGAGC
GTACACATTTTGTGTACAAGAAAATTTAATCCGTGACGTCAAAGTGCTAT
TTTAGGAAATTTTGCCCCCAGCGTGCACGCTCGCGCGATCGATGTGAACT
TAAAATTAAGCGTCATAAAAGTTACCGAAAAGCAAAGTTCAGCTGGAAAG
ATTTCTGACTCTTTAGAACACATTATGTAATCTTTTTTCTATCAATAATA
GATGCGTTACAATGAATATAACTTCTATTTGGATTATAGGTTTTGTGTAT
GGTGTTCGGCTAACATTTGAAAACACCTTCAAAAAACCCATTCAAACAAC
GTGGATCTTGAAAAAATATACCAAAAACTACTTCACCGATAATTTAAAAT
CATACATAATTGGACCTGGAACAAGGAAAGATATTCTACTCCAGTTCAGA
TTCCAAAATCCAATATCTATAGATGACTTAAAATCACTTGTGGTTCTTAC
TGCGACATACACTGATAACCAAAACGTTGTTTTATTAAATGGAGAACAAT
ATTTGACGGTTGAAGCTTATCCAATTAGAAGAGGGATGAAACCAGTGTCA
TCTTTGGTCGTTCAATCATCAATACCAACAAGTAAGTTTAAGCACGTGTC
TTTTTTATTTAAAATCCAAGCTTCCCTGAAGTTTTTCAGGTGATTTTGAA
ACTACTGAAATGGGTCTGGGTCTTTTATGTTTGGGGGAAATCGTCTCAAT
ACAAGTAAATTTAGGTTAGTAAAAGCTAGACTCATCTCATCTCGAACTTG
AGAGACCGAATACCATTTTGATCGAGGTTAAAAAGCATATTTAGAGACCT
GATGTTTAAGCCGAAGTAGCAAAAGGTTCGTAATAATCAACGATTTGTCA
CTTTTATTTGGTTGAAATTCACATGAATTTTTGATTTTCTTTCCGTAGTA
AGTTATTACACAGCCGTGTTTCGATTCATCAACCCGTTACTGCCTAATTG
TAATTTTGTTTTATCATAGGAAACTTGTACACCGTGTCATTCCTATTCAT
CAACTCGTTGGAAACGCCAGCAATCGTTTCATGGGCACTACGTCGCAATC
TACCCAAAATCTTTTTCTCAAGTCCCAAAGAAATCGCTGTTGGTCCTAAA
CAGATTATTTTACAGACCTTCAAATTCACAATTGCCGATTCTTTGGATCC
CCAAACTTTGTTGAATCTCTTACAAATGACAGTCGTGGACCAGCAAAGTA
GACAACCTCTTTTGATGAACGGTGAAAGAGAATTCAAAGCTGATTTCCAA
CCTCATGGCGCAACGCAACCTGAACCACAACAAATTGTGATCGCCAGACA
AGGTAAATAAATAGAGCACTCTTTAAAAGTTCTTTACTTCGTTGCTAGAT
TTGTTTAAGATTTGTTTAAGATCATAGGTTCGTCTCTTTCTTCTTTTAAA
TAAGCCCCCCTCTCTAGAAATGTAAGAATAGTTCTTACATAATCAATTGT
GTAGTTTTTTGATGAACAAGATTCCAATAAGTACTGTCTGACACACAAAG
CTATTCAACACCCTGCTGACGCTCACAACATCCATTGATATCACATGATA
CTGAACAAATTTTCTTTCCAATTTCTTCTTACAAAAAACATCACCGTTGA
AATCACTTTGTATTTTTCCAGTGTATCCGCATTTCATCTGGATACTCATC
GACAACCAATATAATACTCCCATCAACATCCAAGTACAATTACTGAACAA
AGAAACTCCCGCATACATGTACAACCCAGATACTTATACCATCGGTAAAG
GTAGTAAGCGGATACTGAAGATCCCGGTACTGTATTTGAAACAAGCAGAA
CCAGACCAATTGCAAGGCATTGTGGGAATAACTGCACAACGTGATGATGG
AACCAATGAAAAGTTACTGGTGAATGGAGAAAGGATGTTTGTGGTTGATT
TGGTGTCTGGTGATTATTTGACCAAGAATAAACCGGTTGACATTGTCGTC
GCCCCTCAAAGTAAGTTGCGGTTTGTTTTGTCAGGAAAAATACTTATTAT
CTTTTAGTAACATACTAACTTTTGGGTAGGGGTTCTGTTTTTGTGAAATT
TGTTCTAAATCTCATATCCGGAAGTTTTGGAATGAAAGTGTTGACGGTGA
AAAGTTCTCTGAAAATTGTTTAGCGGGGTATGCTTATTAGGTGTATTAAT
AGATTGTTTTGTTTCTTTGATTAGAATTCGTCGTGAAATTTATAGATATT
CGATATTCCTTTAAGGTGATGTTGCAGTTCTCTGAAAATTGTTTAGCGGG
GGTATTCTTATTTATTAGGTGTATTTACTAGATTGTTTTTCCTCCGCCGA
AAGGAGTATTCATCATGAAATTTATAGAATCATTTCTATTCCTTTAAGGT
GATGTTGCATCCAAAATATTTACTTTGGTCAACACCTTACCCGAAGAAGT
CATACTCACACCACGATTCTATCCTAACCCTGATTCTGAACAGCAACCTA
GCTCAGGTGCCGATCCGAAAGGTCAAAGCCGTCTGACATCATATTCATCG
AAAGATGGAGGAGAGAATCGTGTACCAGCTTCTAGTCAAGGAGCAAATAA
CATGAGATTGGAACTGAGAAGAGGTGAATGTATGGAGTTGNCTGACATCA
TATTCATCGAAAGATGGAGGAGAGAATCGTGTACCAGCTTCTAGTCAAGG
AGCAAATAACATGAGATTGGAACTAAAGAGAGGTGAATGTATGGAGTTGA
ATGCAAAATCAACTGAAGATAACAAAAAGTTGATGATCAATGATAAACCA
TCCTTTGTGGTCTGTGATGTAAAAGATATGCTAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00015544	TCONS_00015544	Clytia hemisphaerica	transcript
TCONS_00015543	TCONS_00015543	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00015543-protein	TCONS_00015543-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000212	supercontig	sc0000212:319685..327969 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.85	0.41	0.29	0.18	2.12	1.41	1.48	3.03	0.88	0.82	0.69	0.99	1.01	0.53	0.53	0.94	0.5	0.94	0.68	1.12	3.75	1.8	0.55	1.06	2.29	2.01	3.55	2.16	1.26	1.65

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XLOC_008671 (gene) - C. hemisphaerica