XLOC_008737 (gene) - C. hemisphaerica

Overview
NameXLOC_008737
Unique NameXLOC_008737
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000215:177268..180972+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008737 ID=XLOC_008737|Name=XLOC_008737|organism=Clytia hemisphaerica|type=gene|length=3705bp|location=Sequence derived from alignment at sc0000215:177268..180972+ (Clytia hemisphaerica)
TTTAGAGAATTAATAGAAAAAGTTATGAGTATAAAGACATTTGACCTTGT CCCGGTTGTGGACAGGGTCAACCCCGGTGGAGAGAAAGTAAAAAGCTCAA TCCAATGCATTgaacagatttttgaaaatttgtatttgGGAACATCAGAC TGTTTCATTGTTCATTACTGTATTGAGAAAGGCACAAATAACATTGGTAA AACTATTTTCATGAATCGTCTTCAAAGGAATAAGAACCTTGCATTACGTA AACCTATCGTACAGTTGCTAGGGCTACCGACCATCGGGCAGATTCTTGTT TTGATTGATGGCTGTGTATCCGTTGTTTCAATGTATGGCCTTGAGTTTTT ACGTGGAACTCCCAGTAGAGATTTACTTCGAAACATAACAGTAATGGCAA GGAATACTAAGCCACTTACCTCAACCCATGGTACTTGTCAAATTTGTGTT GGAACAAGGCGCAAAACTATTCAGATCATCACAATCTCTGCTGATGAATG TACAGTTTTGAAAGAAATCAATTTGCAAGGTGTACCCAGCACTTTATCTA TGTATCAACAATTTATATGCTCCAATGTGGGGAATCAATACTACATGATT GATTTCACAAAATCAAACCTCCAGGAATTGTTCATGTATGAAGCTCACGT TAAACCAGTTGTAAAGCAACTTTCTTCAGATGAATTTCTTCTCAGTGGAC CGACTGATATGATGGGTATGATTGTAACATCAAAGGGACTTTCAATGCAT CAACCATTAAGTTTCTTAGATGGCTGTCAATCTGTGGCTTTCTCTTACCC CTATATTTTAGTTCTTGGTGAATCAAGCATTACTGTTCATAGTATCCTTg atcaacaacaaaaacaaggAATATCATTCACTGGAGGTGTTTTGATCACA GATTTCGATGGGCAAGTTTTCATTGCAATGCAAAGATNATCATTCACTGG AGGTGTTTTGATCACAGATTTCGATGGGCAAGTATTCATTGCAATGCAAA GATCGGTCATGGCTTTTTTACCTGTTCCTTTTAACAAACAGATTCAAATG TTGTTGATTGATAAACGTATTGATGAAGCATTTGATCTTCTTATAGTAAG CAGTAAGCTTAACCCGAAACAATATGATCAAACATATGTTAAACAAGTAA AAGCACAAGCCGCGTTCGTTCATTTTGCAGATGGACAGTTTTCAAAAGCA CTACCCTTGTTTGTGGAAAGTTGTGTTGACCCAAGGGAAGTTATTGTTTT ATACCCAATGATGATGCCCAGTAATAAGAATTTCACACCCTCACGACCGT TACTTCACAATATTAAAGATTTGACTGAGATTGTGAAAGGTAGTAAGTCT GTGTTTGCAGATTCCAAGAAAATGTTATTAAACTATTTGGAAGGAATTCG AAATAATTTTGAGAACTGTAAAGAAGAGATTGATACTACCCTACTGAAAC TTTATGCTGAGTGTAATCATGCAAACTTATCAGATCTGATCACAAATCAG AATTCGATTTTTCCTGCAGAAGCCTTGACCTGGTTGACTCAGTGTAAAAG GCACCATGCTTTAGCATTATTTCATAGCTATTTACAGCAACATAAAAAAT CCCTTGATATTTGGCACAAGTTGATGAAAGGTGAACTTACTGATGATAAA TTCCCTGGCATATCATTTGTTGCACAATTTCTTACTGATTTGAAAGATAT CAGCTTAGTATGGACAAGTTCATCATGGGTCATGAAAGAAGACCAGAAAT TAGGTGCTAGTATTTTCATCAAGCGCGAAGATTCAAGCCTCAATTCTGAT CAAGTTTCTGATTTCCTTCAGAAATATCCAATTGCTTTACAATCTTATTT GGAGCATTTAGTGTATGAGAAAGAATCGAGATCCGAGCAGCATCATACGC ACCTGGCGAATATTTATGTCGATCGCGTGGTTAGTTTATTGAATAATACC CTGAAGGAGAAATCAGAGGTTGAAGAAGCTAGATCTAAGTTACAAAGTTT GCTCGAGTCCTCGTCACTATATCGTGTCTCAACTGTTTTACAAAAAATCT CACATTTCCCACTTTACAAAGAGTTGGCAACTTTATATGGCAAAATTGAC CAACACCAGAAAGcattgaaaatcttgatttatCAATTGAAAGACTTCGA TGCAGCAGAACACTATTGTGATACTATCGTTGATGGCAAGGAATCGTTTA AGAAACAACGTATCTTCTTAGATCTTCTTCAAATCTATCTCTACCCAGAT CCAAATGAGAGTAACCTAGGACCTGAACATTACGTTGTGGCTGCTAAGAC TCTACTTAACAAGCGTCAAAAAGAGTTTAACATTGTCAGTGTTTTAAATA TTATCCCTGAGGAATGGACTGTGAACATGGTACAAGGATTTCTAAGAGGT TCAATGCGAGAACGTTTCTCTGCTACCCGAGAATCGAAAATTGAATCCAA TCTTCAAAAACAGTTTTATTTGCAAACCAAAGAGCATCATATTACTCGCC ACAAAGATGTTGTGAAAATGACTGACGAACGCTTGTGCGACTTCTGCAGA AAGCCCTTCACTGAATCGACCGCTGCTCGCTACCCTAATGGGAAAGTGGT GCATATCAGGTGCTCTGGGAATAAAAGTATGTGCCCTGTCACAGGGAAAA AGTTCAAATGACGCTCATTACTTCAATGAATTTTGATTCTCAGacttaat attttttaactCATAGGTATACTTTAataggattaattttcgcggggact taagtTCGCTGATGGCACTATTTGGTGACAATATTTTAACGATTTTTTGC CCTTTACcatcaaatcatgcatgttgcttattgaaatacgcattatttgc gcctctttgatgccagtaaacatttcaaaaagtatttttatgacattttt ttagttttatttagaaatatttcgcggataaggCCTTGCCAAATTTctat tgggacttaatttcgcggatgacactcAAATGCGAAATGCgaaatttgat cccgcgaaaatttatcctatATTAAAGTAATGTATTATAGATTCTTCCTG GtgattttggtgattttggtctgaataatttcaaaacttcctACAGTGGC AACTAGTTCGGCTACTAAATGTTAGggattaaaatattttgagacgTTTT ATTATTTTGCTCTTTAGCTTTGAGTAAAAAAAGCCTAAAGTAAATCTCTT GTTTTCTAATTGAATCTTTTAGCTTGGGGCAGGGCTTtggtcttcatttt tttatcgctttttaatgaattctTCGGGGTACGTGATCTGATtagaaatt ttaaagaattataatttttttatgaaataatttatTATGAAATGTTGACA AGGATTTATTAAATTAAAGCCTTCCAAGTTCCCAGCTGAACTGAATGTAA CATACATTTTCTGGAGGAAGACTCCCTTAATTGGAAACCCTTTCCTACTT GGAGGGGGTAAACTATGTTTAATTCCTTGTTTAGTTGCGCCCTCTCGGCA ATTTGAGAGCAATTATGTTTAAATCATGTACATTTACAAATTAGGTTTCG TTAAtaacttttgtaaaaatttttatatttttcgacTTCtaagttttctt ctttttagtaATTTAACTTCATTAGATACACAATTTCCACCTGATTATTT CACGTTAATTATACAAATCTTCAATAATGAATAAATGATACCTCTCACAT CAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015658TCONS_00015658Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015658-proteinTCONS_00015658-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:177268..180972 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TGFBRAP1transforming growth factor-beta receptor-associated protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.11 8.05 3.23 2.88 10.17 7.01 7.95 8.76 3.32 4.72 5.35 2.83 3.44 2.94 3.14 4.28 4.29 3.99 2.44 2.22 3.25 3.37 14.56 13.6 5.09 6.86 4.1 3.06 10.44 10.16