XLOC_008744 (gene) - C. hemisphaerica

Overview
NameXLOC_008744
Unique NameXLOC_008744
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000215:72973..83435-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008744 ID=XLOC_008744|Name=XLOC_008744|organism=Clytia hemisphaerica|type=gene|length=10463bp|location=Sequence derived from alignment at sc0000215:72973..83435- (Clytia hemisphaerica)
CAACAATGGAATAGTTAGTCAAAATTTGTTTGACTTTGTTATATTCTCTC
TTCCGTTCGTAACATCTTTCAAGAAACTCTTCTTTCATGCAAGTACCGTC
TAGAATACCGGCAACCGATAAAAGTTCAATGGCTTCTGGATTGTCTTTCT
CAATTCTCTTGATTGTTTTTGAGAAAGAAGCCAGTACTGAAGTGTTGATT
CCCAAGCCAAGAGCAACCCTTTGAGACAAAACATCACCTTTATCTTCTTG
GAGATCTGTAAGGTATTCAGCCACAGACATTCCAGTTTGATGCATTGTTG
CCACCGCATGTTGAAGCCCTAATGGATGACATTCTAATTCGTCTGTCAGT
TTCGTTATAGCCTGGATGTTAGGTGTGGGTAGATGGTCTTTTAAAAACTG
GATTGCTATTGGTTGAGCCCAGTTCTCCAATGGAACGACTTCAAATCCTT
GTCCCCAATGTTTTATTTGTGTTGTGATGACTTTGTGTTGAGAGAGGTCC
AAGTAATCGAACAATTGGCCAACATCGGTGCAGTTATCGTAAATGTAAAG
CACTCTTTCATTCGTAAAGTATGTCTTCAGAAGGTTCACAATGATTTTGA
CGTTGGTTTTGTCGTGAAATTGGAGGATAGAGGCGATGTTCGTGAATGTG
TCTTCGATGTTATCGACATTAACCCAAATCACGTGATCGTAATTAGTTTT
ATTGATGACGTAATATTGTTTTGCAAGTTCACTTTTACCGACACCTGGGA
TACCAGAAATCACCACATTAGATTTGTTGTTAACATTCAGATGTTGATAA
ATTTCGCCTAATTCGTTTTGTCTCCCGATAAAGTTTTGGTTTGCTGGTGG
AAGGTCATATTCAAAAGACGGTAACAAGTCATTCAGTTTGTTTTGAGGAC
ATCCTAAAGCCAGTAATGGTTTTTCCAGGTATCTAAAGGACTTTCGATAT
TCTAATGTCAAAATGGGTACTGGACCATGCTGCATTCGATTTCTTTCGAG
TTTCAATCGAAGAGCATTTGCAATGTCATCAATATCATTGACATCTGGTT
CATTATCCCAACCATTGGAAGGTGCCTTGTGACCACATAATGTTCGTATC
AAAAGAAAAAGCAAAGTGATATCAAATTGTGTTGGATCTGTTTGCTGAGA
TGGTGGAAAGACTAGATCGTATTGGTCGTTTTTCAACACTCCTCTCTTTT
TCAATTTATCCAATTTATTCTTGTGTTTGGTCTGTGACAATTCTTGATAC
AATGCCATTGGATTTATTGAAAACCTTTTGTGAAATAAATTACGTAAACA
TATTGTAGATTTCTCACGTAAGGTTCGCTGTTTGAAACCGTTCTTCTGTT
GTTGTGTCGGATATTTTGTTTGTAATCCAATATTCGCTGAAGCCATTTTC
GTTTCAGATTTAACTTTCAGGTCACCATCTTGACCTCCTTGAGAACGTTT
GTATCTGAATTATTTTCTTTAAGTACATAAGTAACATAAGCAGGATATCA
GTTCATTATAATTATGATATCTGAAGCATTGATCGATCCTTTAGTTTACT
AGATCTTATCACATTACTGCTAANCAGGATATCAGTTCATTATAATTATG
ATATCTGAAGCATTGATTGATCCTTTAGTTTACTAGATCTTATCACACTT
CATTACTGCTACAAACTGCTACTTCTTAAAAGAAGTTTTTACTAAAGAAG
TTATAGGTTCAGACAAAATATATCACCCACTTTTTTCTCTTATTGCATCT
GTTTATTCAGGTTTATTTCTTAATTCGTGTTTCCCAGCAACGATATAAAG
GAATAACAAAGGGGTCGTTGCGCGGGCCTTTTCCATTTTTTCCCTATGAT
CGCTATAATAGAAAGTGAAGCTTAGCATATCGCCCCAGTCTTTTTTTCCG
TTTCTCAGCAAACCGACAATTTTACGACTTATTTTCTAATTCGTAGACTC
AACGAAAATAACCTTTTATATTATTTTACTTCTTCTTCTTTTCTTTTTAT
ATACCTAGTATATAAAATAAAGTATGGTCGTCTAGACAACAAGAGTACGA
AAAAGAAATTTGTAAACATAGACAAACTAACATAACACCAAGTTAACAAA
AATAAGTACTATACAGTATGTGGCCCCCAAAACGTCGATCAAATTTAAAA
TTTCTCTGAAATCTATTAGAGGAAAAGACGTTTTACAAAAATTTTTGCTG
CATTAAAAACTTTAACATCTCTACTTTATTTCCCAGAAGTTCTTTTTCAA
AATTTTCAATTTCAACAATATTTCAATCGCTGAAAGATAGGTAGCTTTTT
TCAAATGGCCCCCAAAACGGAGGTTTGCGATTTTAGCGATTTCTCGAGAT
ATCTTTAAGATATGAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT
ACAAAATTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTGGGCAT
AAATTTGTTTGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAACGCA
CGTTTGGGGCCCCCAAAACGTCGGTGTAGTTAAAATCAAATTATGAAGCC
CAGAGGTAATAGGGGGAGAAACTATGAACATATTTGTATTTTCCCTTAAA
TTTGCGACCCGATGGATGTAAAATTTATGATTTTTATAAAATATTTATGA
TTTTTATAAAATATTTCAAGATTTTTGATATTGCAAAGTCCAAACTGAAA
ATTTAGAAATTTTCATAATGACAATTTTGATTGAACAACGTCTTAATCAA
GTTTCTGAAAACCAATCTCTTTTGAAAATAGTTCCATTCATGTATGGAAT
ATGCTGTGAAAGTTTTAGAAAAACAGCTTAACTGAAACTGAAAATATTAA
GCTTTAATAGTATTTTTCTCCTACATTTTGCAAAAAAAATGACAGATTTT
GCCGTATTTGCTGATTCAGCGAAAGTTTTTATATATAATGTTAATTTTTT
GTTATAAACTATCAAGTCAAGCTGGTAGGAACGGAATTTCAAGATTTTTG
CTGTTACCCATGTTTAGAATTTTCGGTTTTATCAATGCTGATTCTAGGAC
CCAAAATACTGGTTGACCTTAAAGATGCTATATATATTTACCCATCCTCT
AAAGTCACAGATGTATCTGCATTTTCTGAAAGGCATTAGGTGTAGAAAGT
TTCCTATACCCTATTTTAATAACTTATTTTCACTATCCAGGGAGCTATAG
TGAATTATATGCTAATTTTATCTAATTTTGTTGTTGAAATATTTCCTTTA
GACGCAAATATGTTATTTTGAAGCCTGTTGAAGCTGCCTTAAACCATCCA
ATCCAACCAACCAACCAATTCAATTCAATTCAATTCAAAAGCATTCTCAT
TTTTTAAATATGACCATCATTCTTTCAAAATAAATAAAAATCGTCTAATT
CTGATAAATCTACAGGTCAGAATCCTCATTTTAATGACGACCTACGTTAT
AGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTAGTGATTCAAAAAGGG
CAGGTGAATGAGAAAATCTGAAAGAAATCTATCGACGTGTGACTAATCTC
GATATTCTTTCCGCCGTTATACTAAGTATCACTTGACAAAAAGCGCCGAA
GGAATAAATATAAATTCATTTATTTTCTAATTCGTAAACTCAAACGAAAA
TAACCTTATTTATTATTTCACTTCTTTTTCTTTTCTCTTGATATACCTAA
TATATAAAACATAGTATGGTCGTCTAGATAACCTGTAACTTGTCACAGAG
AGAGAGGTACGTGTGTATCAGAGGCCCATCCCTAAGGAAACTTTCAAAAG
ACATTTTCATCTTCTTGAACATATCTATCTTTCACACCAGTGGTTTTCCA
CCTGCCATGTTTCTGAAAAAGCCTATCATTAACTCCCTGGTTAGCAGCTT
CTGTAGCTCCACCCCTCCTTAGGCCGTGGAGTCCAAAAGGTTTTTCATCG
AGATATATTCTCTTGATATAAGACAAGACAACGGACCTACTCTTGTCTCC
CGAATAGACGTCCCCCTGCTAATTGTTAAGAGAAAAAAATCCATCCCCCC
GCTCTTATTAAGACCCCCCCCCGCTATTTCATTACAGTGAAGATACACCT
TAAATTTGTTAAGATTTTCCTTTTTGTTGGTATTGGTTCTTATTTTACGT
GTTCCTTTATTAAAATTTATTTTTTGTTGTTAAAATTGATATCAGTTAAA
AAAAATTCTGTTTTCAAATTACCTCCCCCCCTCTTATTCCATCCCCCTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTCCCCCCCCCCTGCTTAT
TCGGACCCCGCCTCCCGTCTATTCGGGAGACAAGAGTAGCCTTTATTCTT
TCTCTATTTATGAATACCCTTTTTCTTAAAGAAAGATGTTGCACGGGATA
GATACGCTTGCAGTGTCAGTGAATCTTTGTAGTGTCTTGCTGGACAACTT
AACTGTCCAACTTGACAATAAACACCCAGGTATCTTCACGATGTGGATCA
GTTTTCGATTTTTCTATGAATATTTTCATATATGTCTCAAATTAGAAAAT
TAGATTCGAAACCTCGTCATACTGTAGAAAACCAGTGTATGATAAAATGA
TAACGGCAAAGTTCCTCAGATCAACTAGGCTAGCCTGATCTCCCTTGACC
AATTGAAAGATCTTGCGAATATCATCTGACTGGTGATTGGTTCTTTCTTC
GACTTTTTCCTATGGCAGATCCTTTTTACTTCGAAGCGACATTATGGAAA
TGTTTCACGGCGTAGAAAAACGGCTTCTTGGAAAGATACGTCCAGGGTTT
GATACGTCTAACTAGATAAAACTGATGATAAATAAAACGAAGTAAAAGTC
TTTAGCTGGATAAGGTTGGATCTCTTCAAAAGTCGCACACCATCTTTCCA
ATCTTTTGAAGTAGCAGCTATATTTGTATATACTCTCCGCACGAGCGTTC
GTCAGGATATCTCCGATTCCAGTGGCAAGCTCTTTAAGCTGTGGATCATC
AACGCGAGAAGATAGGTCTTGGGCAACTTGTGCTAAAAGAATTGTTGAAA
TAAATTGATGAAATTACAATTATGCCATAAATGGGGTATTTTCGACTTTA
TGCTATGACAGCCAAGCTGCCATAATGACCCAGTCACTTAACTCTTGCCT
CGGTTGATACCACTAAACAAGCCCTTGCCTCATTCTACCTCTGAGGTGTA
GAAAATACATGATAAATAATAATTTTTAGCCCCAGTTGATACTACTAATT
TACCCTTGCCTCGTCCTACATCTGGGGTGTAGAGAATTCCATGATGATGG
AGCTTATCGATTGTGGTAAATTGATGGAAAAATTAAATAGAAAACGCTGG
ATGAAGTAATGCTGTGTATGTCGAAAAAACTTTGTAAGAAACCATGTAAC
CTGTCAAGAAATAACTTACTGAACTTAACTGGGAACAATAATCATGTTCA
ACATGCTATTGATTTAACATTGAAATTTAACAAGAATTTCTCATGGGTAA
ATGAGTACACGTTTTTTTCTTTATTAGAACCCAGTTTATAAGAACATTTA
GGCTGAAATTCGTCGAAAAATTAAGAACATCGTAAGAACATGCCCAGCCT
CAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGCGTTTAAGAAC
ATTTTAGGCTGAAAATTGCTAAAAAAAATAAGCACATCCAGGCTCAGCCA
AATTTTAGGTGTTCTAATAAAAAAAAAACGTGTACTCAACAATTTTGGTT
TACTGTCTCAAAAATGAACAAATAAAAACTTTTTATTTATTAAACTTTTT
TTATTAATGCAATCCTAGAAATTATGACTTCTCGAGATGTTTTAAAAAGA
AAAACTCAGATTGAAAATATGAAAATTAACAGTGCTAGTTTTAATACAAC
AAGACACATAAAGTTAATGTGGATTTGCCAACACTTTTGATAACAAACAA
AGTTTAGGATTATTTTTCTGAAAGATTTTATTTTATCTACAGTTAACTCA
AAGAAAACAGATAAATTAAAGATAAATTTCAGTACAATTAGTAATTTTGT
ATTCCCAAATAAAATATAATACTAAAAGTGCAGCTAATTCATAATTGATC
ATTTATAAAGATACTTTCAAAATGCAATTATTGATTAAAAGGTTTTATTT
TTACATAAGTGTTTCCGTTTCATATCAGACACATATTTCATATCAGGACA
GTGTCTTGCTATTGTTATATTATGCTGATATAAGCAAAAATTGTTTTTCT
TTTCCTCATTCTGACCAATTTTGCTCCACTTCCGTGTCAATTCAATGTGA
AAAGACTTGAGAATCAAAGTTGAAGAACAACCATCTTATTCAAAAACAAA
ACCTTTAACTATCAGGTCAAAAAGTAAAGCTACCGAATTTTCGGAGTCCC
GATGCTATTTGTTTTATTTCATCTCATATCCCCCGCTTATTTATTTCTAA
AATGTTTTCAGCTATTAAAAGCTGAACTGGTTTAATTAGCCTGGTTTTAG
TCTATAATTACCTTGTTATTGGGTTTTTAGAGGTACAATTTCGGACCCTC
CGGTAATCAGGTCTCCCCGTTTATTATAATTTGAAGAAATTTCGGAACCC
GTCCTTTTATTCAGACCCTCTACTATTTGGAATCTTATAGAATATTTGAA
AAACATGATAGAATGAGCAAGTTGGTAGCTGCTGAAAACTTAGATTTAGT
GCATGGAAAAATATTAAACAACGAATCAAAAAGCAATAGCAAGTAACAGA
TTGTTTATTTTGATTTCTGCATTTTTAAAAATATCTGCATCAACGTCTTC
AATGATGTTCTCATGGTTACAAATTTTGCCTTCGAAACTTTTAATCATTC
GATACAAAATCAATGCTTTTCTAAATTCTTCATTTTTCTCCCAATATTCA
GCAAGCATTAAAGTTTCACGAAATAAATTCCCGGTGTATACTTGGTTATC
TATTTCTGGTGATACTTCAGTTTGTAAATACTCCCTCGCTTCTTCGACTT
TGTTTTGGTCAATCAAATGACAATAAATTAACAGTTTCGCCCGACTTGGA
CGACAAAATACATAAGGTGAAAGCACAGAAAGATCTAATTTGAGCAATGC
AATTATCAGTTCATTAGTGGTAGTTCCCGTAGTAGTACTCTGCAAGATGA
TCATTTTGCAAAAAGCATCCAGATCATAATGGTCGCAGCGTGGTTTAAGC
CATTTCTTGAAATAGCCTTTACTCTGTTCAAGCAAATTGACGTCATAAAG
AGCTCGGCCAATGTCACGTAATGATTTATACGAACTTGATAAATCCATTG
ATTCGATAACTTCAAGACCTTCTTTGACTTTTCCTTTCAAGATCATACAG
CAGGCAATTTGAACCTTGCTATTGGTTCCATATGTAGTATTATCATCATA
CTCTGGTATTTTGAAGAGTAATTCCAATGCTTTATCATACTCCCTCAACT
CTTTGTAACAAATGCTTGCCAAAAATGTTTCTCTTGATGTTGACATTTTT
TTCTTAATATATTCCAAAGCTTTCTGCCAATGCTCATTGTCCATCAAAAC
TATTTCATTAAAGCTATGGTTGCTTTTTGTTGAAAAAAATTCACGATTTC
TGTACAGCAAATCCAATAAACTGTATTTAGCCTTTGATGATCGAACATGG
ATAAGAATCCTCATTTCCAAACTGTCCAGTGCTGACAGTATATATTGAGC
TTGTTCGTTATCCACAAGCTTCTCATGCAGAAAATACAGTTCGATAAGAT
AAGGCACTGGATGAGATTGATCATTTTTCTTGAAATTATAAATATATCTT
GAAATATAAAACCTGTCTTTTGAAAAAACCTGGAGCATTCTCATCATAAT
TTCAACGACAAAGAAATCATCGGATAAGATTTGCAGCAAAGTATCCCGAT
AACACGGTTGCTTATAAATGAACATGATTTGATTGTACCAAAGAAGTTTT
TCTTCATTACAATCATGTTGAATCGTAAGGTTTTTCCCTGCCATTGCAAT
AAGCTTTTGGATAGTATGTCTTTTCCGATTTTTCTGTATTATATAAATTT
TGATAGCCTCTTGGTACAACGAATGAATAGTCAAATAATTCACTTTTTTG
TGACTGAACTCGACGATCCTTTCGTTTCTTTCAACGATGGAATAGTTAGT
CAAAATTAGTTTGACCTTGTTATATTCTCTCTTCCGTTTATAACATCTTT
CAAGAAACTCTTCTTTCATGCAAGTACCGTCTAGAATACCGACAACCGAT
AGAAGTTCAATGGCTTCTGGATTGTCTTTCTCTATTCTCTTGATAGTTTT
TAAGAAAGAAGCCAGTACTGAAGTGTTAATTCCCAAGCCAAGAGCAACCC
TTTGAGACAAAACATCACCTTTATCTTCTTGGAGATCTGTAAGGTATTCA
GCCACAGACATTCCAGTTTGACGCATTGTTGCCACCGCATGTTGAAGCCC
TAATGGATGACATTCTAATTCGTCTGTCAGTTTCCTTATATCCTGGATGT
TAGGTGTGGGTAGATGGTCTTTTAAAAACTGGATTGCCATTGGTTGAGCC
CAGTTCTCCAATGGAACGACTTCAAATCCTTGTCCCCAATGTTTTATTTG
TGTTGTGACGATATTGTGTTGAGAGAGGTCCAAGTAATTGGTCAATTGAT
CAATATCAGTGCAGTTATCGTAAATGTAAAGCACTCTTTCATTCGTAAAG
TATGTCTTCAGAAGGTTCACAATGATTTTGACGTTGGTTTTGTCGTGAAA
TCGGAGGATAGATGCGATGTTCGTGAATGTGTCTTCGATGTTATCGACAT
TAACCCAAATCACGTGATCGTAATTAGTTTTATTGANGCCAACATCGGTG
CAGTTATCGTAAATGTAAAGCACTCTTTCATTCGTAAAGTATGTCTTCAG
AAGGTTCACAATGATTTTGACGTTGGTTTTGTCGTGAAATTGGAGGATAG
AGGCGATGTTCGTGAATGTGTCTTCGATGTTATCGACATTAACCCAAATC
ACGTGATCGTAATTAGTTTTATTGATGACGTAATATTGTTTTGCAAGTTC
ACTTTTACCGACACCTGGGATACCAGAAATTACCACATTAGATTTGTTGT
TAACATTCAAATGTTTATAAATTTCACCCAATTTGTTTTGTCTCCCGATA
AAGTTTTTGTTTGCTGGTGGAAGGTCATATTCAAATAATGGTAACAAGTC
ATTCAGTTCGTTTTGTGGACAACCTAAAGCCAGTAATGTTTTTTCCAGGT
ATCTAAAGGACTTTCGATATTCTACTGTCGAAATGGATAATTGACCATGC
TGCATTCGATTCCTTTCGAGTTTTAATCGAAGAGCATTTGCAATGTCATC
AATATCGTTGACATCTGGTTCTTTATCCCAACCGTTGGAAGGTACCTTGT
GACCACATAATGTTCGTATCAAAAGAAAAAGCAAAGTGATATCGAATTGT
GTTGAATCTGTTTGCTGAGATTGTGGAAAGACTTGATCGTACTGGTCGTT
TTTCAGTACTCCTTTCTTTTTCAATTTATCCAACTCTTTCTTGTGTTTTG
TCTGTGACAACTCTTGATACAATGTCACAGGATTTCTTGAAAACTTTTGA
TGAAATAAATTATGTAAACATGTTGTAGATTTCTCGCGTAAGAGTTGTTG
TTTGAAACCGTTCTTCTGTTGTTGTGTCGGATATTTTGTTTGTAATCCAA
TATTCGCTGAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015669TCONS_00015669Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:72973..83435 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.46	0.54	0.37	0.48	0.22	0.45	0.64	0.85	0.55	0.28	0.53	3.95	2.7	1.05	1.54	1.54	1.2	9.59	11.55	1.23	1.06	0.85	0.83	1.6	2.16	0.41	0.13	0.46	0.19