XLOC_008798 (gene) - C. hemisphaerica

Overview
NameXLOC_008798
Unique NameXLOC_008798
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000216:298721..301207+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008798 ID=XLOC_008798|Name=XLOC_008798|organism=Clytia hemisphaerica|type=gene|length=2487bp|location=Sequence derived from alignment at sc0000216:298721..301207+ (Clytia hemisphaerica)
GTGGTGAAGGACGATGGTTCGGGAGATTCTTGTCTCGGAAATTTGACTTT
agaactgaatttttttaattcattataCCTGCCAAGATGTTAACATGACC
AAACCAACGAAAGGAAAGACACGTGGTAGAGGATCACAATGTGCTGTCTG
GATGTTATGGTATGAATCTTTGGTATGTTTCGATCTAGTGGTTTTGCAGT
TTTGAGAAAGTTTAAAAGgcaatttgaatgtttttaagCTATAGATTTTC
CTCTCAGCCTCTATTTAAGAGAtcgttttttctcaaaacaagGCAATCTT
CAACTTTAATCTCAGTGTTTTGATTTTCGGTCTTGAATCTTGTTGTTTAC
TTGAGAAATCATGTCTTTCTCATACATTAAGAAAAATTGTCTCGTGAAAC
ACTTATTTTTGACGTTTCTTTAGGAAATTTGAATTGCTTTGTTTGCGGCA
GTTTTCGAAAGAGTACTCAATTAATTCTCTGTCAGGTAGTAAAAAACGAA
ATTAGCTTTTAATGGCAAGAGAGAGGGTGCGAAATGATATTTACTTTGGT
GCTCACATACATCAATTGAGTATTTTGTGAAGCTAGATTTTTTTGTACCG
TTAATGTTGGTTTGAGAATGTGCAATTTAAGGATTATACGTTTCTGTGTG
TTTTGAggttaatattttttttgttgaccTTGAAAATACAAACCTAATTG
TTCCTGATTAACATTACACACAAATGAAACCCATATTATAGGGATTAAAG
TAATTAACGATGAAAATAGTTTTGTCACTTGGAAAACAATatcttttgtt
tcaaattttattgcaacactctttgaaagaaaatttattgcTGAACAGTG
ACATCCAGTAACAGTTGTATTGCATTTCTGTTTTTATTTCACATTCTCAA
AAAAAGCAACAGTTAACTGAAAAGATAGTATCTTGGAAATAAGAATGTCT
GGTCGGGTTTTAGAATCTATAGTTTTGGTTCTGATTTTTCATGAATTCTT
GTTTGTAGGTTTTCTTGAAATGTCAATTTAAGGTTTGTACATATGGTGTA
AACAATCCAGCATCATTATTTGTCAAATTGTTCGAGATTTGTAAGGATTA
TTGTGCGTTTAACTTGTTGCGTTAACGTTTCATGTGTgtaatgaattttc
aaattcattatTATCTACTatgttctttataagaatacccaTAATAAGTT
TTTgaggccttcggatgttcttaacgtttagattttcaaccctgaaatgt
tctcaacatgGTCTTATTTTCACCGATGTGGGAGTATTTTTGTACATGTT
CCCAAGATATATTTTAGATTCCGCAaggccttaaattgttcttaatactC
TGTATGGCTTTTGAAAGTCGAAAACTTTTTCGAAATGGGGTGCTTAGACA
GTTTATCTTATACCTTTTCTTATAGATCTTTAATCTTTGTTTTCAGTTTC
ATTCATCCGTGATGAGCGAATCAAATATTGGTTTTGGATGTCACGGATCT
ATACCGTTCTTTCTGACCACGTCTAGTCAGAGATTACTATTAACATCGTC
GAACTCACCACCAGCATACAGGACCGAGCCTTAACACTTTGGTATTGACT
GCAATACCCTTGCCTCACCACGGATTGCGCTATAGAGAAAATGTCATATA
GAACTTTGAAAATCGCTGCAGATTACAATACGATATAAGTTTGTATACCC
CCTGgatttattcattttttggGACCCATTAATAATATTCTGATGGATGT
TTGGTCAATTCGCTGCCAAAATAGTGTACTGTTACTAAGTTAATATATAG
ATATTTATCATGTTAATCGAGACGGCAGTTCTCCTGCTTTATGCTTTTTA
CGTAGATTTTGTTATTAAGTCGTCATTGTAAACTTCGTcagctatatcat
tgttttaaagttttaaaggttGCTCAGCTTGATCGTCCATgattattatt
ttaaaaacagattttttctctcgcttTTTTCAGGAAATCTGTTCAAACGA
CGGCGAAATTTAAAGATCCTGGAAGCacttttttcgtgattttttagACT
TCAAAGCAAAACGTACAACCTTGGAATCTCTTCTATGGTCTTTTGGAAAA
CATGGTGCGGATTAGCTCTGTATAACAGAAAGAATGTAGAGCTCAGTTAA
CCATGGTTGATGTTGATGCAGATGATCGTCACTGAAGATTGATGCAGGAT
ACGACAATGACGTCACAAtacttgtgttttttttttacttaaaaggAAAC
AAATAAAACTCtccgtcataaattttgaatcCCCTCAGATCCGCCACTGC
ACTTACTTCTATAGCTTTTTTAGACCactttcaagaaatatttaatatta
GCCCCATTCAGTTTTCAATCTCTATGAATAAATTTCTCAAAGGGGTTGAA
ATTTAGGGTATTTTCTAAAACGGACAAAGTTTTAGCCAATTGGGTCTGTG
AGACAAGGGTGTATTGCCGTGATCATAGTAAGCCGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015744TCONS_00015744Clytia hemisphaericatranscript
TCONS_00015745TCONS_00015745Clytia hemisphaericatranscript
TCONS_00015746TCONS_00015746Clytia hemisphaericatranscript
TCONS_00015747TCONS_00015747Clytia hemisphaericatranscript
TCONS_00015748TCONS_00015748Clytia hemisphaericatranscript
TCONS_00015749TCONS_00015749Clytia hemisphaericatranscript
TCONS_00015750TCONS_00015750Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:298721..301207 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.95	8.46	7.52	6.97	0.47	0.08	0.26	0.33	0.63	0.26	0.18	0.33	0.03	0.09	0	0	0.1	0.05	0.07	0.08	0	0.09	4	4.73	0.13	0	0.11	0.61	2.26	3.68