XLOC_009064 (gene) - C. hemisphaerica

Overview
NameXLOC_009064
Unique NameXLOC_009064
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000231:383272..389357-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009064 ID=XLOC_009064|Name=XLOC_009064|organism=Clytia hemisphaerica|type=gene|length=6086bp|location=Sequence derived from alignment at sc0000231:383272..389357- (Clytia hemisphaerica)
GTCGGTATTAGCTCTTTTCTTATGATATCTTACTGTTTGCAAACTCCTCC CCCAGCTTAGTTAGTGTGTGCACTGTAAATTGACTGTAGTTTTTCCCTTG TCTTCATTCGCTTGCTCTTATTGGTTTACTTGTTTACTTCTATCATCTCT AATCATGCTCTTTTTTTCATTTCTAGTGTTTAAATAATATAAAAAATTAG AACATAAATTTTTCAAAACAATAACCATGAGCTCAAAACAGAGTAAGTAT CCAAGTATCTATAGTTACTTTAAGGGCAGAAAGTTTCGCGAAGTCAAAAA GTCGCGAAATTTAGCGAATTTAAGTTTCGCGAATTATGGTTTTCGCGAAT TCATATAAAATTTACCTTTTTTGGTAACAAAAACTCATAAAACACGCAAA AATTTAGCAAACAGTGAAAAACTGAGTAGTAAAGTTTATTTTTCGCAAAA AAAACTTTCGTGGTTTTCAGGTTTAATTTCTTACCTGGCAGAAACTTTCG CGAAAAAGGATCAAAATCGTGAAAGTTTCTGCCCGCGAAAGTTTCTGCCC TTAAAGTAATTCGACTTTTAAAATACTTAATTTTCATTGATCATTCTAGA CAGCAGTTTTAAGCACAAGGAAATTTGGAATCTAGAATTTCGTAGCTCGC AATTCGCTCATGTGTGCATCGTTCTTTGGTATACAGACACAGATGTATAG TCTTTCCAATAAAGATCAATTTTCTATTCCCTATAATGAAAAATAATGAT GATACATATAATTATGCTATACGTTGTTTTTGTTTTTTCGGATTTGCGGC CACCAATGCTAAAGCCCTAAAGTAATAGACCAATTTCCCATCCAAAAGAA ATGATAGTCGGCCTTTGATGTGCCGCATCCCCAGTCAACTACCCTTGCGC ATAAACCTTAAAATATTCCGAAAGCGAGGGCTTCCCACAGCAAAAATCCT CTGGGTTATCTGCATCTGGGTGGAGAAAAATTTTCTAAGAATAATTAGGC TCATAGACTCCTTAAGAAGAATTTCAGAACGAAGCTGACCCCGCATTGCC TCAACAAAAAAAGTTTGTCGGATCTTAGAAAAAAAGAGTGTAGTACAAAT TTGAATTGTTTTTTTTTTATCATGATTTTTGAACAGATCTTCCAACACAA TGTTCAAGCTCAACAGTCACAATAACAACAACTACCAAAAATCTTTTTCG TATGTAAATTATTCCAGTGCCTTTCCCTGTATAGTTTAAATAATTATCAT TTGTCAAATGCTTTCCAAAAAATAAAGCGTACCTGTGATTAGGCTGCTGG CATCCACTAACGGATTGCTGCTCCTTATATACTACCTGCAGTTGAAAAAT CGCTTATTTTCCTTCCAAACAAGAGTTGTAGCACGCCTTTTAACTGCATT TCTATTATTTTTTTAGCTGGAGTGGGTCAAATTCTAAGCACAGGTATAAA TTTTGACTATAATATTTAAAAGTGAAAAAATCAGGGGACATTTACTTTGA CGATGATGCTATACACGATTTTTTTAGAATTTCGACCGGGACTTAAGTGG GATAAGTGACTATCATTCCTCATCCTACAAAACCTTTGCTTCAATATTTA ATCCCCGGCAGAATTTATGTGTTGATACACTATATTGAGCAAAAGCCATA CTGAAAACTAAAGACCATAATATTTTATTTATGAGTAATACCGGGTGACT CACGAAAAAGTATAAGAGTTTGGAGGGTAACTGTGTCCGAAAAAAATTGA ATTTTAACTAAATTCTTTTTTCATGGTAAAGAGGAAAGGCAAACTTAAAT TTTGATGTATCATTTTTTAATTTTGGAAAAGTAGTTATCGAGATATGGAG GTATAAAGTCAAAAGTCATTATAAAAACAGTATCTCGATAACTCTTATAC TTTTTCGTGGGTCACCCGGTAGATTTCAAATGATTTTCTTGTCGACTTAG ATGCTTTCAAATACTCTGTCGGCTTTGAATTGTTGGCTTCGAGGCATAGT GCTGACAGTTCCATTTTTTCACCATGCTTTTGCTCATTCATTTTTTTTAG GGTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCAAAAAATAGTAAAGGT ATACTAGTATACCTATATTAACACATTCAATTGTTAAAACTGGTTGAAAA CAAAATCTTCTGAACTTCTTTTCTAAGAACCTACTTTCTCATAGTCTCCT CTAATATAACGAATAAAGTTTGGCTCAAAAATATGCGAACACCGTTGTAC ACCGTTCGAAAGATATTTTCAAGGAGGACACTCTAAAGGATTAATTTTTT TGAAAACTTGAAAATTGAAAAAGAAAAATAAAGATGAAAAAAAGAAGATT CTTCCGTTTCAAATATCATGACATTAATTTTATAAGGATTATTGGAACTT TACAAACTTCGAAAATGTGTTCTAATTTTTCGTGTTAGATAAAAAGTTTG AAGTAGCTCATTTTAACTGTTTTTGGTCATTTTTGGCCGTCTTATGCCCA CTTTAAAGACTTATTTTCCAGCTGAACAATCAACTGACGAAACGCGCAAT CTTGTCTGGTTTAAAAACTACAGTGCTTTTTCAAATCAATCACTATGTTT ATTATCGATACAGACTTCGCCAATAAACTGTCAATCATTAAAAAGCGGTT TTGATTCTTTAAAAATTCATATTACTCGTGAAATAGAACTTCTTTTGTTA AATCGACTGATCTCTGAATAGTTGACTGGATTGTGCTTTCCATATTAAAG GAAGCGTGTCTTGTTTTCAATACACAAATTTCCTATTAGCAGATTCATGT AAAAACGTCACGAAAAAATCAAAGAGTAAAGTTATGATTGGCTGAGACAT GATTACCGCATGCTTTCGACACTTAAAAGAAAAAATATCTTATCTGTTCA GAGCTTTACATGTTTTTTTTNTGGATTGTGCTTTCCATATTAAAGGAAGC GTGTCTTGTTTTCAATACACAAATTTCCTATTAGCAGATTCATGTAAAAA CGTCACGAAAAAATCAAAGAGTAAAGTTATGATTGGCTGAGACATGATTA CCGCATGCTTTCGACACTTAAAAGAAAAAATATCTTATCTGTTCAGAGCT TTACATGTTGTTTTTTTTAAATAAGAATATATTTGTAAGAATGTCCATGA TGAAAATGGCCAAAAAAATAAGAATATGCTAAGAATATCACTATCATGGA ATTTTGCTACTCAAGCTAAGAATGCTATTTTTAGAGCGTTTTCAATTATA AATTGTCATCAATTACCCCCCAAGTAAGGCTCACTTCTTTTACAAAAATG CCATTTTATGCTTGAGACTTATGTACTAAATGTTTAATCTAGTCTGAATT AGGAACCTAACCTAGGAATGCTGTAAGAATATTTTAGGATGATTTTCCCA AAAAAGTTAAGAATATCCATGATGAAACACCATTCTTATAAAAAAAGCGT TTACTCGACGTTTTTTTGTGACTTTTCTCCCATGAATCTGCTACTGTAAT AGGGAATTCGTGTATCCCGATCGCCAACAGCGCAACCAGTAGGTTTTGAA ACTCGAACTTTCCAGAATCTAAGTATGTAAAGTCTCATGTAAAAGTGATT TCAGTTTTTCGATTGACTCTTTTGCAGGCCCTAACAAGGATCGCATTTAT TTGAGACTATACATGAAAATCAAAAAAATTAAAAAAATCATTTTGTAAAA AGCTGTATAATATTTGAAAAAGCTCACTTTGTTTTGTTTTTCTTTTCCTG TGTATAGGGTAAGTCAATTAATGATTTTGTTGCGATACCTACATACGTAA AGCTTTAGCAAGGGTTGCCACTAGCAATTCATTGGTTTATTTTGTATCCA AACGCTAAAAGGACTCTACTCTTGAGCTAAGGATTGCCGCCAAAATGTCA GTAATACTTACACAAGTGTCATCCAATTTTGTTCTAAAACATCATCAAAA TGACAGGGTGTTTAGAACTTTAAATTGTCGTATTTCCATACGTTTTTGAG TATGAGACTTGTTGTAGTACTTTTTTTGCTCGGAATTTCATACACTATCC GATGGTTATCCACCGTTTTAGTTGAATACGAAAGAATTTTGTGTGGTTGT GTTCTAGAAAAGATGTCACGGATACTACCGTCAACTGCTCTAACTTGGGA CAATTGGTCGAAACATGGTACTGGTTGATATCTGGTCTGTATTTTTCACT TACTGTTAAATCTCTTTGACAACAAATTTGTTTTGGTAACTCCACCAAGT TTATCAATCATACTTATTCGTTCCTCTTAGAATGCACAGACACTCGTGTG TGTTCCACAACGGATTTTTTTCATATTTCGATTTAAAAGCCTACTCGGTG CGAAAGAAAAATCGTGTATTTTTTAATACGCCGTGCATTAACTCAAATCA AATGACTTTGGAGGTTCGGTGAAATGCTGGCCGAATTGCCGTCCCATGTT TTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTGAGTGTTTTCCCTCT AGTATAAATACACAACACTTAATTTATTTGATGAACTATTCTTTTCAGTT GAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTGAAAAAGAG CGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTCATCTAA AAAACTGGAGGCAAGTAGTGGATAAAATTTTCGAAAATGACGAAGATAAT AGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGGTTTGGTGG GGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGCCTGATC TTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGGAATGAT ATTGTTAAAGATTTGAAACGTTTTAAAGAACAGCAAAAATTGTTTGAAGT TTTGGATGCAGACGATATAAGTAAGTTGAATGTTAAAATGGATGATGATG AATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTGGCACAC CACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGATAATAT TAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTTTATTGG ATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAATTAGCTAAA ATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCTTAAATT GCTTCATAAATAACATACTGTTTATGATTTTATGTGTTTATAGTACATTA GTATTTCTTACATGCACCCACACTGAGATAACAAAATTTGTATACCTCTG TTAGGGATAACGTAAAATAATTTTGAAATACACCAAACCGTATACACGCT TTTTTTTATAAAGAATATCCTCTCTAAGAATATCAGGGTGAAAATTGGCC AAATCGTAAGAATACCCTAAGAATATTATAGAGCGAGTTTCACAGAATTT GATAAGAATACAATCATTTTGTATTTGGTTAACAGAAAAAAAACTGCTTC TCTTGTTAGACTTAAGATTTAAACTTTGATGTAGAAGTGTAATTTTTGCT CCTAATGTGCACTCAAAAGTCCCAAACTGTCAAATTGATCGCAGTGATGC AGAAAAAGTTTTAGTGAAATTGCTTTAGCGAATAACTATTTATGATTTTT AGTGCTGTCCTCATAACTCGGACGAATGTCTCCTTAACTCGAACAAGTCG TCTTATCCCTTAAAGTTTTTATTTTACATAAGTGTTCCCGTTTCATATCA GACACATATCATGACAGTGTCTGCCTATTGTTATATTATGCTGATATAAA CAAGAAATGTTTTTCTCTTCCTCTTTCTGATCATCTTGTTCCACATGTCA TCCGTGCCAATCCAATGTGAAAACGCTTGTAAATTAAAACTGATGATTAA GCAAGTGATATCACTCTTATCTAAAAACAAAACCTTTAACATCCCTTACC TGTCTTAATATTTGCGTCTCCCTCTTACGGGTCCGAGTTTTGAAGACTTC ACTGTGATACACATAAATATTTTTTACATGCACCACTTTATATTTAGCTT TTACCAATTGTTATTTTATGAATTTTTATCATTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016232TCONS_00016232Clytia hemisphaericatranscript
TCONS_00016231TCONS_00016231Clytia hemisphaericatranscript
TCONS_00016230TCONS_00016230Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016231-proteinTCONS_00016231-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000231supercontigsc0000231:383272..389357 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.61 4.01 4.05 3.52 5.59 4.77 8.35 8.53 7.72 8.01 4.77 4.14 7 7.04 7.18 7.66 4.7 5.14 8.45 5.21 5.38 5.25 10.19 9.73 6.05 8.1 5.01 4.64 7.45 9.03