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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016232 ID=TCONS_00016232|Name=TCONS_00016232|organism=Clytia hemisphaerica|type=transcript|length=271bp
GTCGGTATTAGCTCTTTTCTTATGATATCTTACTGTTTGCAAACTCCTCC
CCCAGCTTAGTTAGTGTGTGCACTGTAAATTGACTGTAGTTTTTCCCTTG
TCTTCATTCGCTTGCTCTTATTGGTTTACTTGTTTACTTCTATCATCTCT
AATCATgctctttttttcatttctagtgtttaaataatataaaaaattag
aacataaatttttcaaaacaataaccATGAGCTCAAAACAGAATCTTCCA
ACACAATGTTCAAGCTCAACA Run BLAST on NCBI transcript from alignment at sc0000231:388193..389357- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016232 ID=TCONS_00016232|Name=TCONS_00016232|organism=Clytia hemisphaerica|type=transcript|length=1165bp|location=Sequence derived from alignment at sc0000231:388193..389357- (Clytia hemisphaerica)
GTCGGTATTAGCTCTTTTCTTATGATATCTTACTGTTTGCAAACTCCTCC
CCCAGCTTAGTTAGTGTGTGCACTGTAAATTGACTGTAGTTTTTCCCTTG
TCTTCATTCGCTTGCTCTTATTGGTTTACTTGTTTACTTCTATCATCTCT
AATCATGCTCTTTTTTTCATTTCTAGTGTTTAAATAATATAAAAAATTAG
AACATAAATTTTTCAAAACAATAACCATGAGCTCAAAACAGAGTAAGTAT
CCAAGTATCTATAGTTACTTTAAGGGCAGAAAGTTTCGCGAAGTCAAAAA
GTCGCGAAATTTAGCGAATTTAAGTTTCGCGAATTATGGTTTTCGCGAAT
TCATATAAAATTTACCTTTTTTGGTAACAAAAACTCATAAAACACGCAAA
AATTTAGCAAACAGTGAAAAACTGAGTAGTAAAGTTTATTTTTCGCAAAA
AAAACTTTCGTGGTTTTCAGGTTTAATTTCTTACCTGGCAGAAACTTTCG
CGAAAAAGGATCAAAATCGTGAAAGTTTCTGCCCGCGAAAGTTTCTGCCC
TTAAAGTAATTCGACTTTTAAAATACTTAATTTTCATTGATCATTCTAGA
CAGCAGTTTTAAGCACAAGGAAATTTGGAATCTAGAATTTCGTAGCTCGC
AATTCGCTCATGTGTGCATCGTTCTTTGGTATACAGACACAGATGTATAG
TCTTTCCAATAAAGATCAATTTTCTATTCCCTATAATGAAAAATAATGAT
GATACATATAATTATGCTATACGTTGTTTTTGTTTTTTCGGATTTGCGGC
CACCAATGCTAAAGCCCTAAAGTAATAGACCAATTTCCCATCCAAAAGAA
ATGATAGTCGGCCTTTGATGTGCCGCATCCCCAGTCAACTACCCTTGCGC
ATAAACCTTAAAATATTCCGAAAGCGAGGGCTTCCCACAGCAAAAATCCT
CTGGGTTATCTGCATCTGGGTGGAGAAAAATTTTCTAAGAATAATTAGGC
TCATAGACTCCTTAAGAAGAATTTCAGAACGAAGCTGACCCCGCATTGCC
TCAACAAAAAAAGTTTGTCGGATCTTAGAAAAAAAGAGTGTAGTACAAAT
TTGAATTGTTTTTTTTTTATCATGATTTTTGAACAGATCTTCCAACACAA
TGTTCAAGCTCAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016232-exon-sc0000231-1575043694:389116..389357 | TCONS_00016232-exon-sc0000231-1575043694:389116..389357 | Clytia hemisphaerica | exon |
| TCONS_00016232-exon-sc0000231-1575043694:388193..388221 | TCONS_00016232-exon-sc0000231-1575043694:388193..388221 | Clytia hemisphaerica | exon |
| TCONS_00016232-exon-sc0000231-1510915933:389116..389357 | TCONS_00016232-exon-sc0000231-1510915933:389116..389357 | Clytia hemisphaerica | exon |
| TCONS_00016232-exon-sc0000231-1510915933:388193..388221 | TCONS_00016232-exon-sc0000231-1510915933:388193..388221 | Clytia hemisphaerica | exon |
| TCONS_00016232-exon-sc0000231-1491911889:389116..389357 | TCONS_00016232-exon-sc0000231-1491911889:389116..389357 | Clytia hemisphaerica | exon |
| TCONS_00016232-exon-sc0000231-1491911889:388193..388221 | TCONS_00016232-exon-sc0000231-1491911889:388193..388221 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000231 | supercontig | sc0000231:388193..389357 - |
Blast
The following BLAST results are available for this feature:
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