XLOC_009174 (gene) - C. hemisphaerica

Overview
NameXLOC_009174
Unique NameXLOC_009174
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000237:59451..65551-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009174 ID=XLOC_009174|Name=XLOC_009174|organism=Clytia hemisphaerica|type=gene|length=6101bp|location=Sequence derived from alignment at sc0000237:59451..65551- (Clytia hemisphaerica)
TTCCAGGATTCAGCAAAAATCTTGATGGGAAAACAGTAGTTCAAAACAAA CCCCCCTGTCTAGTCTTCACTGAATTTAAAAATTCAATGAAAAAAGCAAA AGGTTGCAAAAAACACCAATGAAATTTAATTCTTTACAAAATTTAACCAA ATGTCAATAAAATAATACTAAAGAAATGGTAAAAATTAGCAGCATTTCTT TTCCTCAGGTTTTTTTTTATCTGGAAAACCTTGATGTTGAAAAGCTGGCT GCTCAGGAGGAAGCTTTTGCCCTATTTGTTCAAATATATCATTTACATTT TCAGCATTCAAAGCAGAACACTCAGCAAAAACAGCACCAATTTCATCTGC AAAGCTTTGCCCTGTTTCTGTTGTAACTTCTCTTTGGTCAACTAAATCTT TTTTATTCCCAGCAATAGCTATTACAATGTTTTGCGGCCCCATCTGCCTC AATTCTTTGATCCAACGTTTGACACTTTCAAAACTCTGTTCTAAAGTTAT ATCATAAACAACAACAGCAGCAGCAGCTCCTCTATAATACATTGGTGCAA GGGCTTTGTATTTCTCTTGTCCTGCAGTGTCCCATATTTGAAACTTAAAT GCTTGATCCTCAATCCGAAAGTTTTTAGACATGAATGAAGCACCAATCGT AGCAGTTGAGTGAATTTCAAAACGGTCATGAACAAATCTCATCGCAAGGC AGGATTTCCCCACACCAGAATCACCCAAAAGACAAAGTTTGATTTCTCTA ACTGCATTAAAAGCCATTTTAAAATTCAAAAGTTATACCTGATCATAAAC AAGAAGTTGAGATTTGTTTTAATGTTTGCATAGACGTTTGCTTGGCTTGC TCTTTATGCTCGTGATTCACTTTCGAAATCAAAACTTTGTTTTGATACTT CAAGTTATAGCATATAGAATCGAATAGATTATTTAGCAAAAGAGATGTAC ATTTCCGGTCCCTTCTTTGGACAACTTTGAGTAAAAATCAACCATGCTTA AAAACTTTTCACTAAGATCTTAATATCACTGCTTCAAACTACTACTTTGA TTATGTAATCTTATTACTTTGGGAAATGGTACGAAAGCTGTGATCGGAAA AAACCCTGATTTCAAAGTGTGAGAAAATGGCTGCGGAAGATACTACAAGC TCAAATTCTGAAAGATTTGTAGCTCCTTGGGCTACAGGAGACAAATTAAG AAAAATCGAGGAGGAAGTTCTTATACCTAATTTGATGAAGAAGAAGGCGA AAGTTATTTGCAAAGAATATATGGATTGTAAGTATTTTTTAGAATAAGCA AAGGATGGATAAATTTATTTTGTCATCTTTTTTTTTCCATTTCAAATTTT TATCGATTTTAATGACATTTTAATGTAGGTTATCTGCAGAGATTCAGTTG AAAAATGTTGCTATTATAGTCGTTTGGGAGAACGTGAGGGTCTTTTGAAT AGCTAATTACTGTATATTACTCCAGCAGAAATTTTTTTAAATGATATAAC ATATCATTATAATAAAGGATCGATAATCGGAACGGATCGATGAAGGATCG ATAAAGGATCGATAAAGGATTGATAAATTACTTATTGATTCCGATAAAGG ATCGATAGAAGATTGAGCTCTAAAAAATCGTGAGTATCGATCCTTCTATG ATCTCTTATCATCGATCTTTTTTTCAATCAATCTTCTATCGATTACTTAT CGATCCTCTACCGATTACTTATCGATCCTCTACCGATTACTTATCAATCC TCTACCGATTACTTATCGATCCTCTACCAATCACTTATCGATTACCTTTT GATTATTTATCGATTACCTATCGATCTATAAGGGTTACGGAATTATGTAT CGATCAATTATCGAGCAGTTATTGATCTTTTATCGAATAGCTATTGATCA ATAGACCTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGC AGAAAAACAATGATAAAACCATGCATAATTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCA TGATACAGTAATTATGCATGGCTCTATCATTGTTTTTATGGCTGGACTAC ATAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTATTAGAATTAT CGAATACTCGTTACAATGACCATTTGTCCGTCCATTGCAGTTAACGATAG CCCGATCGAGAGTAATCTCTGAACAGATTCTAATTTTCCGTACATGGCAC GTATTCTCTCTAAAGACCATATGGGACCCCGTAAGAGAATCTGTCCAGAT TAGGGGCACCACTTGGATCTTTTTCATCTAGATTTGAAATAGATATCGAT AATTGAATGAGGTTTTGGGCGCGGTGATTGGCTTTGAGTAAGGAAATAAT TGCACCAAATCAAACATCGGTCATAAACAATCTGGGAACATTAGAGCCAG CCCTTTCCCTGTGTATCCATTGCTTTATGAACATTACTACGAAGGGTGGT CGTAAGGAACCATTCAAACAGTACGTGCGCTATAAGGGGGTACCCCTAAC TTCAAAAAGCGTACGGAAGCGTACTTTGAGGAGGGGAGAGGGAATTAGTC GACTAGTTTAATAGTCTAGTTGAACCCGACTGGGGATGCGGCACATCAAA GGCCGACCATCATTCCTCTCCGATGGGAAATTGGCCTGCTCCTATCCTTT AGAGCTGTAGCGTGGGCGGTTGCCAATCCGCCATCGGAATATCAGATACC GAAATTCTCACCCAATGGAAATTTGGAAAGTCCTTATTATCCGCTAAAGT ACCCAGAAAAATCTGCTTTTGTCCCTACTACCAATACATTTTTGAGATCG ATAAAAGATCGATATCAATTGGATCGATATATTTTTAGAATTGATTGTTT GATTGGATCGATAAGATCAATAAGTAATCGATATCCTATGGGATCGATAT AATTTTACAATCGATAATTTGATTGGATCGATGTAAGATTGATAAGTGAT CAATAAATGATCCTGACCAAAAAATTCTTGAGTATCGATCCCAACTCGAT CCCTTATCGGAATCGATAAGTAATTTATCGATCCTTTATTGATCCTTCAT CTATCCATTCCGATTATCAATCCTATCAAGCCCGATTCTCCTAAATTACT ATTCTATGCTTTTTCTTTCCTCAGCTTTCGGTAAATGTGTGGATGGCCGA ACCATATCTATTGCATGGTCATGTGGAGCAGAGAGAGATGCCATGAAAAA TTGCTTGAAAGCACAGTAAAGTTTTATTTTATTTTGTTTGATACACAAAG TAACAGTTAGGCCGTTCGTTAAAAATCCCTTGGTTCCCGTCATTCCAACC ATCAAAAAGTGGGTCGGTCGGTCGGGCGAAAAATACTTTCTGTTTGAAAG AAACAGTCCAAGAGGGCGGAATTTTCCTTAGATAAGGGTGGTAAACGAAC GTTTGATCGCTCTAAGCCTCTTTTTCACTTCACAAAAGCTCCGCTGGTTT GTTTTGATGGTCCGCAATGAAAAATCTGAGTTGAAAATCGGGAAAAAACG GAATTAACGGGTTTCGAATTGTTTTTTGGGCGAGATTAGCGTTTGCTCTT TCTCTCAAAAAAGAAAACATGGAGGGTGATGGTGGAGTTTCAGCTGTCAG GAAAAATGGTTTCCGACTCTCCGACTCTAATTTTTCAGTAGAAATCACGG TCGGCCGGGTGACGGGAACGTCTTTCAATTCCTGTATTAATAACACGCAT GTGTAATTTTTTTCGTTCTTTTAAACCACATGTCAGTCAGGGTTGGAGCT CGAAACATTGCATCATTATTTAGATGATCTGGAATTGATGAGCACAAACT TAAAAGGGAAATGGTTAAGTCTGTAAAATGTAGAAGAGGCTTTCTTCTAT TTCTTCGATTGTAGAAAGGTCCTTGAACAATTTTTAATGTACCACATTAT AATGTGCGACATGATTTATAATGTAGGACATTATAATTATTAAAAACTTA CATATAATGTACAAGATTATATTCCGTGGTGAGTTAGGGCTGCGTGAATA TGCTATCTCAAAATCGTAAGTACCGCGTTTATCTAAACTGCTAAAAGCAC TGGGAATGGCAATAAAGTTGCGTGATTGTGTTTATGAATAGGGTGCCATA TCAGGAAAATTTAATTTTTGACTTTCTGACACACAACAGAAGTTAAAGCC CCACAAATACAAATATTTACGTCATTGCATAGCATATGCATGTTTGAGAC TCAAAAAATATGAATTCTGCTAAGCATGTAGCCTGGAGATCTATGCTATG ATTTCTTATTCTATATACTGATGGTGAAATATACAGATTATAAAAATACA GGGTGGTTCTCCTGTCTACTAAGCATGAGGCTCACAAAAATTTATCTTAC CTTACCGGGGGAAAAAATGTCTGGGGAAAGTGACGAAAATTTTGAGGGAG TGACGAAATTTATCCCCGACGAAATTTATCTCGTCCAAAACTTTTACTCA ATTTTTTCCCCTAACTAAAATTCAAGTCCAAATTTTTTACGCCTTTATTA ACAGAAATTAGTGCTTTAAACGTCGAATTACAAGATCTATTTTCGAGCTA GTGAAGAAAACCATTTCATTTGGACAATTTAGTCAGATGGAAGTGACTAT AAAAATTGTAAATTTGGTCGGGGAAAAGTGACAAATTTGAAATTTTGGTT GGGGAAAAGTGACGAAAATGCCTCTAGGTGACAATTTTTTTCCCAGACTA ATTAAAACCCCGACATTTTTTTCCCCGATAAGGTATGTGCTTATATAAAA AATGTGTAGCTTTAATTGACCTTTTGCACAATTTGTGAAAAAATTTGAGA AAAACCTTGAATTTTTTTAGTTTAAATTAAAGATTTTATTTCGAAAAAAT CCTCTTTTAAACCTGTTTAAAAAAGAAAATCAGGAAAAGTTAGGGAATTA CTGTACAACTCTTTAAAAAATATCAGAGACAACTCTAAGAATCTTTTTTC ATCTAGATTCAGAAAAAAGCCTCTTTTTAAGCAATTTTGTCAGGGCAAAA AGATTTTTAACCAAAAGTATAGGGGGAGAGTATTTCAGGAAATTGTTATC CCAGCTGGCACACAACGTTGTTTTAACGTTCAAATAACGTTAATTGGACG TTACGAATGTCAAATGGACGTTGTTTTGACGTTGTGTGCAGGCTGGGATG ACTCTACTTGGGTAAACATACAGTGTGCCCCAAAAAAAGTACAGTAAACT AATTTTTATATAAAGTATAATAAATTTTCGGCCACACTATCAAGTTTTGA ATTGAATTGAAGTTTTGTCTGATTTTTTCTCAAAAAGATGTGCCCGACAT TATGTTTCAGTTTTAACTTAAGTTTGCATTTTATCCTTTCTTCAGGTTAG ATAAGCCATCATTGTACAGTGAATCTCGTCGCGAATATCTCCAAGAAAGA GAAGAATTTCAACAGAGTTACGTCGAAACTGGTAAAAAGAAGAAAATCGG ACGAAAGGAGTCTGCATTTTAGTAACTTCTTGAATATTTTTAATCACAAC TGTTACATACTTGTCTTGGTGACTTTTAACAAGTTTAGAATTCCAAGTAC CTAAATGACATGTGTCAAAAAAAAAAAGGAAAATAATAATAATATGGAGA TAACTCATAACTAAGTTTGAAATCGGTTTGACATGCTAGGGATTCTTTGT TCATCCAGTAGACATTCATTTCTTGCAGGCTAAATATGTTTAAGTGATAA AACTTTGCAAAAAATGTTATTAAACCTATCCATTTAAAGAGTACATCTAA ATTACTATGCTTAAAAATTTATTTTTAGCAAAAAAATATCAAGTACGAAA AATTGAAATTATTTTCTTTGTAAATACTTTTTTTGTGAAATATTTATATT ACGTAAAAGAAGAAAATTTAAATCTGATTTATGAATGTAATGTAATGTCT TTCTTATCTCACATTTGAGTTCAGAGCAGTTTCCCAATTAGGATGAAATT GTAAGGTGTTTTTTCTAACCGGGGCCTTTTTATTCATTAGGGTCCCACCG G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016427TCONS_00016427Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000237supercontigsc0000237:59451..65551 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB22Aras-related protein Rab-22A Homo Sapiens
RAB31ras-related protein Rab-31 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.13 28.1 27 24.9 23.49 19.1 16.36 16.05 16.13 15.89 13.86 10.62 9.09 7.16 9.55 11.27 15.48 15.09 7.17 9.65 13.89 14.38 18.2 16.87 14.48 15.75 13.96 11.56 16.16 14.17