XLOC_009235 (gene) - C. hemisphaerica

Overview
NameXLOC_009235
Unique NameXLOC_009235
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000241:112260..118762+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009235 ID=XLOC_009235|Name=XLOC_009235|organism=Clytia hemisphaerica|type=gene|length=6503bp|location=Sequence derived from alignment at sc0000241:112260..118762+ (Clytia hemisphaerica)
GAAGTGAAAGGGAACTCTTTTGATAAAATCGGTTTGcacataaaagaaaa acatctaaATTAGCCACAGAGTGGTACAATATTAGAAGTTTTAGTTACAA TTTTacaataattgaaaaatttgccTGCATGCCAAATCGTCTTCCAAAAT AGCCACTTCAAGTGGTTCAGGCCTAAAAtgagttttgaattttaaaattt gaatccTTGGTCTTTAACCaagctttaaaaaaagttaatctGGAAGTAAT ATTATTATCAACTTGGGTTACCATTCTAATATAAATAGGGTATAAGAAGC CTCTGATTTGGTgctttgatttcaattttgtaTAGTTAGTTACAGTAGGG ATATCGTAGGGGTAAGATTGTTatgttgaaaagaaataattctacatgaa ttttattttcttgcagcaagaacaaacaaaaatatattataaattGAATA CATTAAACACACATAAAAAATGGTAAGTTTACGTACAAATTTCAGTTTCT GGGTCATTCCACgaatttcttttctttggtcaaggttttttgacatttaa aaTTCCAGGCTCGATAAGTACGCTTTTGATTTAACTTGTTGGCATCACAA TTTTGAGGGAAAAAGGTAGCACTCTATGTACATTGTGTTGGTAAGAAGGA TTCCATAAACCTGGTCAACTATCGTGGCAAAATATCTTTATTGCTGAATA AATGAAGCAATCCAATGGTTTCGTTCACAAGTAATGTATGTTATGAGTTG TAACTCTCCAATTCTTTCTTCTTAAAAATTCTTTCAGGGGCCAAAGAAAA AAGGAGGGAAGAAATCTGCCAAAGCAAAGGCACCCACAATCGTTGATGGA ATCAGTACAGAAGAAATGACTAAAGAACAGGTTTGTTATAAAAGAATTTA AGATGgaacaaattttgacaaaaatatttgtttagaacaAAAAGAGAACT CCTGTTACAATAATACAGTTGTTTGTGGGATAAAGATTATAGAAACTGAA CCTCTACAGGATCTTTGTAAAAACTCCCTTCTTTGTCAAATTTAGCTAAA AAGAACTATCTGCTGGTGTCCAAATGCAATAGTAAGGTTTTATCATGTTT GATCATTTCTTAACAGCTTGAAGAATACATTGTAAGACTACGTGAGGAAC TGGACAGAGAACGTGANGATCATTTCTTAACAGCTTGAAGAATACATTGT AAGACTACGTGAGGAACTAGACAGAGAACGTGAGGAAAGGAATTATTTTC AACTGGAACGTGACAAGGTCAATACATTTTGGGAAATCACCAAGAGACAG TATGAGGAACGGAAAGCAGATCTACGGAACAAAGAACGTGAAATGGAAGA AGCTGAGGAGAGACATCAAGTGGAAATCAAAGTTTATAAACAAAAAGTCA AACATCTTCTCTATgaacatcaaaataatattacaGAACTAAAAGCAGAG AGTATGTTATATTAACTTTTGTTTGGTAGAGTCACTATGTTCCCACCATG CATAGTGTGTAGAGAGTTAAGAACCTCCCCCTatgtttatttcatcccca atACCCATCTTCCCCTCtgtaatgaaatcttttttacaaaaaatccgTCT cgaaggaaaatttttctatgTACTACCAAAATGGTGAAAAAGTACAAAGT AATGAAGTCACGAGCCAACAATTTCACAAAATGACAAGCGTTTTTATATT AACAACCGTGAACATAAACAGACCGTGACCATTTTTATATGATTGAATTA ACCAAATTTCCAAAcctaatttttttaaccttgatCTCCCCCTACATTCC CACCTCCCCCAAAAGTCTTTTTGGCAAATCTTGGTACCCCCAGAAAGGCC TCCAAAAAGTTGGCATCCCTCTATTAAAAAGGTGGTATAAACTATCCCAT GGTTACCGTTATCGAGTATATTTTCTGCGTTGCTTGTAGTAAACTACCTT GAGTTGactttgtattttaaagacCCACTTTTTATGGGTAAATATCATTT AAAAACAGGATTTATTGCAAGTTCTtaccaaggacacttgtatagcgcta tacaagtgtccttgttcttacagtagagtctctttaactcgaagtTTTAC AAGTTGAATACCTCctaaactcgaacaagttttatggtccctccAGTTAA CAATGTTTCATTAGTCTTACTCCATTACTGGAACagatttgtgttccccg tgagtgttcgagttatgaaaacTCCGtgagtgttcgagttatgaaaacTC CGtgagtgttcgagttatgaagactctAATGTATATATTTATTCGTTTTC TATTAAGATGCTGTTGCATTGAAGTTAGCACAAGATGATTACAATGACAA CGAATCAGAACTTCGAAAAGATAAACGAAATCTTAAAGTGGAACTCAAAG AACAAGAACTTTCAAATGAAGATCTATTAAAAACACTAATTAGGGtttgt attttgaaaattctgatgTTTTTAATGTATTGGTTTAAATGTTATTAGTT TCGAACTGTCTCTTATCCAATAGTCAAACTTGGTCAATAATTGACATGAT TCTTTGGTTTTCTTGTTTCCCTTGTAATAATAAGTTATGTATTTCGGGAT ATTTTTATCTTGAGAAACTTCCAACTTAAGGTATTTCCCTACGTCTACCA ACCTGTAGGTATCAAGTAGTCTATTGACAAATGACTTACACAATGCATAT TTTGATTGTTGAATTGTTTAGAAAAAAGATGAACAGATCACAGCGTTACG TAATGATTTCGAACGACAAGCAAAAGGtattcaatgttttctttcGTTAC AAGTTGAAAAACTAGGAAAAGATGTATTTTTGCAGCTAGTTATTTAAATC TCTTAACTTTCAGATCTTTTGTAGATAACAAAAGCCTGGGTAAAAGCCTC ACATCTCAGATATCCTCTTGCACAAGCTCGTCATTTCCATTTGGTAATAC AGTATTTATAAGCTAACTGCTACTTTTAAGGCAACCTTATGAAAGTGCAA AGTTAGTAAGTGTCTTTTACACATGGTTTTTCCACTTTCAACAATATTTA CACGGCTCATTTTATTCATTTCGTCTGCCAGAAATCGAATCAAAATACGA GCGTAAAATGCGTATGTTACGTGACGAACTGGAATTACGACGTAAGACGG AGATTCACGAGGTTGAAGAACGTAAGAACAGTCAGATCAACACGTTGATG AAGAACCACGAGAAGGCATTCAGTGATATCAAGAACTATTATAATGACAT CACACTCAATAATCTGGCACTTATTAACTCGCTGAAGGTAAATAAATAGG ATCTTATCTACAATCGGCANGATCAACACGTTGATGAAGAACCACGAGAA GGCATTCAGTGATATCAAGAACTATTATAATGACATCACACTCAATAATC TGGCACTTATTAACTCGCTGAAGGTAAATAAATAATCTACAATCGGCACC CAAATATTtagcacaaaaggggaattccctcaaaactttaaaacggCAAG TGATtattaagtgctttaaagtacggtCAGAAAGTAGagtttaactctga gttttaacattagacttaaggtTTACGACCTTAgaatctcaggatctaaa agctcaaaaatgtttcaatatgaCTGAGAACATAggctggaagccactta acccctcccaaatcaaaaaattccctGAAACAAAGTACTGAAATTGTAAT TATTGCCCGAGCACTGATTGTAGAGCGATTGTCCTGGTTCCTCAAAACGA TTAAATGTGATGCTAGCTAGTACCTTCTTGGACATAATAATCCTCTCGGT ACTTCATGTGTTACTGAGAACTCATGTTTGCTTTTGAAAAGCTTGAATTC TCCACACTGAGTAttatcttaaggaaaaggtttACATCAAGAGAAGCTTA CTTTTAGAGTctggcaaatctttaaaaatcaaaatgtaagCATCATATCA TGTATAACATTTTCACACCTTTtgaattacacattttttttatagatgtc caaaaatttttgaagtcttcggatgCTCTTTTTGAGTCATTTTGTGATAT TGTTGTGCAACTTCATAAGGAATGTGTGTTTTAGAGTTCGCGAAACCTTA aaattattcttaacattttggccaccgaagccTTGTATCCTTATACAGGT TGCTcttgtaaaaataaaacgtcTATTATGGTCTTTTTTCTGATCTTGTC TCTTACCTTTCGATACACAGGAACAAGTAGAAGAGATGCGTAAGAAGGAA GAGCGTTTAGAGAAGCAAATGAACGAAGTGATGACTGAGAATCGACGCCT CATTGAACCTCTTCAAAAAGCTAAAGAAGAAGTTCAAGAATTACAAAAAC AGGTATCCGGGTTTTTAGCAAATATCTTAGTGAAGGATAAagatattttg gaaaatttcggAACACTAGCTTATTACACAACTAGATATGTcgaatttct aaactttttggcTTATGATATTACAGTAATATGAGTCACAGCAAAAAGTT TAATGTGACATCCTTGCCGAAATAATTTAAATGAAGCTTTGAATATATTA TCATTGTGTTTCAGCTCGCGAATTACGAAAAAGACAAAGCTTCATTACAA AGCGCCAAAGCAAGACTTCGCGTACAAGAACAAGAGCTCGGAAAATTACA ATGGGAGCATGAAGTTCTTCGACAACGTTTCGAACAAACACAGAACGAAC GTGATGAATTATATAATAAATTCGTGACCGCCATACATGAAGTGCAACAG AAGAGTAACTTCAAAAATTTGTTGTTGGAAAAGAAATTGGGTGCTCTTGC TGATACCCTTGAGAAGAAGGTATGCGGTTTGTTTTTGTCTTTCAGAGATT CGAAAAGTCGTAAGCACAATATACTCGGAAcagttcattttttgaaaagc gtTATGCATCAGTTTTCAGTAAagtttttacatttctttttattatttaa ttatttgcTTTTGCTTATAAAATTTTCTTAGAGCCTGAGCAGGCCTCCCA CACTGCACTATATTCTTTAAATGCTTTTATCTTTAAAGTAAATTTTTATG TCTAGCCTAAAAGATGCCACGGTATTTTTAGTCCCCTTATCATTTCAATG CCGGAAGACATTCTACCAATTCATTTTAACCATTTGCGTTCTTAGGAAGC ACAATTGAATGAAGTATTATCAGCATCCAATCTCGATCCAACTGCATTGA CAGTCGTCACTAGAAAACTCGAGGTAAGTGGTTCGCGAAGGTATAGTCAT TTTTCTATCGTTTTTTATGTGTCATAATTTATGCTAATTAAGGTAAACTG CACGACAgtgctttcaaaaaatagttaAAATAGTCTTTTGAACCTCCTTG ggataataaaattttacattttaattttttttttcttttatttatcatCC GATTCCTTTGTGGCCGGCTCAGTCGGTAGCATTCAATCTCCCAGGACTTG CTCcaataaaaaagggaatagaCTCTCTCTCTGCCGGTAGCCACTACatg cagtagcgtagacaagaggggccAAAAATTTGTgttggagagcagatttt tataacacagtaattatctttttatattatgaatagataattgctgtatc ataaaaatctgctctcctacacaaatgtTGCGCCCTTGTCTACGCTGCTG GGATGCACTAGATGAATATATTTACTTTACTTTATCTTACTCTTGAGTTC TTCTTATTTAGGATGTATTGGACTCGAAGAACAGCGCCATTAAAGATCTT CAATATGAACTTGCTCGTGTTTGCAAGGTAAGCTAAATTGTAACCCTTTT CGTATGGAATTTTTAGGGGTATTTGTAATTATTGAGtggtcaaaaattaa aaataaagaatgtATATATGAAATAGGCTTTTCCTTTGGCCTTACTTTGC CAGAAAAACCCTAATTAATTAGGGATTTTAAGATTCTAAGATTGCAATTA TTAGACTCTAAAGTAGTATgatttttcatatgaaaaataTAAGTTAAGTG TATGGTTTGAAAGCATTGACAGCGACTGTCGTTTGATTGATAACGAATGT TTTTTTCTACGTTTTAGGCTCACAACGATTTAATTCGAACGTACGAAGCA AAATTCCGTTCGTTTGGTGTTCCCACAGAAGAACTCGGTTTCAAACCCCT TCAAAGCAATGTCACTGGGCAACAACTTGGTAAAGGCGCTGCTGGATTGG TCGCTCAACCAACTTAACAAATTAGTACCCAAACTCCCTTATTTTGTAAG AAACAGGTATATatgtaatttattttattattttttaactgCTTGCTTGA ACTATTATGTAAATTTAAAAGAGCTAAGGAGATTGTATATACgtaacttg atttttttggaactGATCAATATTATTTTAGTAATGCCAACAAACTTCAA TTTTTGTTAATTCCTTTTTTAAAAACCATTCGTTTAACAGCTCTCTGTGT GCATAATTGTAGGGATGGTTGGAATAAGCAAGGGGGTGGATTGGTACTTT GGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016522TCONS_00016522Clytia hemisphaericatranscript
TCONS_00016523TCONS_00016523Clytia hemisphaericatranscript
TCONS_00016524TCONS_00016524Clytia hemisphaericatranscript
TCONS_00016525TCONS_00016525Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016525-proteinTCONS_00016525-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000241supercontigsc0000241:112260..118762 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GAS8growth arrest-specific protein 8 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.28 40.13 33.9 32.07 384.21 280.17 82.98 83.99 61.58 57.78 53.37 55.14 12.89 12.61 11.36 13.36 17.2 18.1 19.93 23.24 15.69 13.76 29.09 25.11 237.83 154.81 31.82 27.08 12.67 13.57