XLOC_009362 (gene) - C. hemisphaerica

Overview
NameXLOC_009362
Unique NameXLOC_009362
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:159313..168468-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009362 ID=XLOC_009362|Name=XLOC_009362|organism=Clytia hemisphaerica|type=gene|length=9156bp|location=Sequence derived from alignment at sc0000248:159313..168468- (Clytia hemisphaerica)
CGAAAAACAAAATTGTAAGCGTTGATAACGAAATTGTGCTACTCATAAAA
TTTCAGGAATTTTTGACTTGGGGAGATAACCATGAAAATATACTTCGAAC
ACCTTTTTTGTTATATTTCTTTGAATTTGAGCATATTTCTTTCAATTTCT
TTTGGAGATCCTATACCATTTGATACAGGTGAAAAGCTTTTATTAATAAC
CATCTCTTAAAGAATAAGACATTTAAGAGCAATTTTGATTCTAGAATCGC
AAAACCCTGAAAATTTACAATGATGTTCGTTGGTCGAATGGTCGGTGGGA
TGTACGGCGTGTTATGACTCAGTCTTTTTCACCACCGTACATCGTTTGTT
TGTCCCGGAAAATACTGCAGATGTTCTTGTCCATTGAGCGGGTATTCGTC
ATCAATCTGGTCATACAGTTATCTGGTGGGAAATCAGGCATTTAAACCAA
CAACTTCGGATAGTATAATTGCTAAAATTTAAGGCAATAGGGAATCAGAA
ACGCAAAAGTACGCAAAAGTAACGCAAAAGTACGCAAAGATACGCAAAAG
TACGCAAAAGTACGAAAAAACAAAAGCAGCCGAGCCTCAGCCAAAATCTA
CTGGTTCTTATCAACAAATGCTCTCTTTTCTTTCATTACAGAGTGTGGAC
ATACATATTTTGGTGGACACGATGTCCACTCTGCTACAAGCAAACTCATA
GAAGGAAAAGATTCAATCCCTCATTCGTGGCCGTGGCAAGCCGTGCTCTA
CTTTAATGGTGAACCCGAGTGTGGTGCATCCATCCTTACGCCATATTGGA
TTTTGACAGCGGCGCATTGTTTTAACGGACCATGGATGTTGGAAGAAGAT
ATACCGATGTATAAATATACAATGAGGTAAAATCCTTGCACAGAAAGCAA
TACGAGAATGTTTCATTAATTTGAAGACCTGCCCTTTTTCCGTGTGTCAT
ACGGGTGGCAAAAACACGAAAAGTTAAAACCATAACCTTATCGGCCCTTT
TAACGCCTAAGTTTTGCGATATTCTAACTCTTCCATGGACAGTCACTTTT
TGAACTTACAAGAAACTTTGTAAAACTACACTTCAAAGTTGAATAGTTTG
ACTTTAAAATTGGCTATTCGGCTAAACTTTTGATATTGTTGGAAAACTGT
GTGTTATAGATCTCGTGCCGGTTAAGAGATGGTTTGGAAATGGTTTTTTC
CTGTCACTTTTATCTACATCATCCACCGCACAGGTCTTATCTATCTATTT
GTATCGATCATTTCACATTCAGGGCTGGTTTACATAAGTTACATGTCAAA
AACGAATACCAAGTGGAGATGAAAGTATCAAGAATCTTAAGACATCCCGG
ATTCTCAAGACGCCATTCTAAATATGATATCGCTTTGGTGCGATTAACGA
CACCATTAATGTTCAATGAAGCCATTCAACCAATTTGTCTTCCAAATACT
AAAGCTGAATCTGGCAGAAAGTGTGTCTCCACAGGTATAATTTTGAGGAG
GTTTCAGAGGTACCTGATTCCGTCAATTTCCCCCTATTTCCATTGAACCT
TTAAAATGAGAACCAAAACTCCGTCAAAGAAAATTTCTGTGAAATGGAGG
ACTTTGTTGAAAATTCGGAATATTAGTTATTTTGCTATTTTCAGTTTTTC
CAGACAAAGAAAGCAGAATTTCCGTCTCCGGTAGTGGATCTAAATTCCAC
ACTTCCGTCCCAGAACAGATTCCGCATCTTATCTGCTAAATCCACTTATC
TGTTACCGATCGGATTCGAAACAGTCAATATATTCACTAACAATTAACAT
AATCTCCAAGTGTCATGCCAGGAAGAAGTGGTATGGTGGTCCAGACAGTA
ACCATCTCAGCATGCTCTTATTAATATTTAGGTTGGGGAACAACGACGCG
AGGTGTGCTTGATTTCAGTGAAACTTTACAACAAGGCGAAATGGTGGTCA
TCGACACTGAAATGTGTAAATTCCACATGGAGGTAATGTGCACCCTGTGT
CACAGACCCGGTTGAACCCCCTCCCAATTGGAAAACTTGACCAAAACTTC
GCCTCGGGTGGAAAAAATAACCTGAAATTTCATTTTTTAGCTCTGTACAA
TAGAGTTACTATTGTCGTGTTGCTCAAGGCTGATCATACCTGAGCTAATG
ACAACAAAATTTATATTTAAAAGTTTTTCCCGGATATCGGCCTGACTTAC
CGCTGGAAGGTAAGGAGACGGGTTGGTACCCTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGGATGTGGGTGGTCACCATTCACAGATTGACT
GAGAACGTACCCAATTGCGATTTCTGAGGCGTCTGTGTTAAGGATGAAGT
TCTTCTTAAAATCTGGGAACTGGAGAAGTGGAGGGTTGGTTAGTCTCTCG
ATGAGTGTTTTCCAGGATTGCTCTTGCTCCGTCGTTGTTGGCTTCTTCGC
GTTGATTAACGGCTTTACGTTGCGTGCTTTTGATTTTTCTGCATTTTTCT
TCTCGAGAAGGGCAAGGTCTGACTGTAGCTTTATCAGCTTCAGGATTAAT
CCCCTTCGCTGGGGATACATTAGTCGATCGAGTTTCACGTTTAGTATTTC
TTGTTCAAGCGCCAGGCATTGTTTCTCATTGAGGCTTTCGACATTTAGGT
TGCGATTAATTGGTGGTTCGCCAGGATACATCAATGGGATGTGATTGTTG
CTGATAAATCTCTCGAAGAGGTAATTTCTTCGGTTATTCTTTTGAAGGAA
TAGTTGTGATGTGAATTATTCATTTCCCAGTATTGTTTAGTTAAGATTTC
GTGTAAGGTCGACATCAGGATAGGGACGGGATGCGGTACCGGAGCAGTTC
GGTGGATCAGTTTGTTTTTAATCACGTGGTTTTAAAGTGTTTCTATAAAC
CGTGGTTGAAGACAGCATTTTGTTGGTTCGATCCGCTAGCTAGCGATTGG
CGGTTGAACAGCTGGGAGATTGTAAGGTAAATCTATAGATCTTCAGTTCT
ATTCTATCGAGCTCGAAGGCTCTCGTGGGTAGGGTTAAAGATTGTAAGAT
TTGGTCGCTTGGGAGGTGATCAGTGATCACAGCGTATTCAATAGACCTTC
GGTCTCACTCGGGTGAGCCTAAGACTCGAGAAGTGAGTTAAGAAGATTGT
ATGGATAGGGCTGTGCTACCTGACCAGGACGCGATGTATTCAATAGATCC
TTGGTCTCACTTGAGCGATTTATAAGGATTGTATGAATATAATCACCTTA
CTTCGGATCGTTGATGTTCGCGATTCGCCGGTGACAATCTGCGATCTTTC
TCTGTCGCTTCTTAACACGCTTCATCAGTTTTTTGATCTGCCTCTCCTCC
TTTTTCTGCAGTCTCTGAAGCTTCGCCAAATTCTTTTCGACCTGACCTCG
CGATGAGATGGGAGGTGGTTGGCTCGATCTGCTGTGCTTTCTTGTCTTGG
CTTGTCGACGATGCTTCTGTATTATTTTTCTTCGGAATCTTGTAGGGTTT
CAACAGGTTTAAAGGGTCTTTACAACTTCTGTTTGTGATGACACTCTTTA
AACGTCTCTGTCCTTCAAGTATCTTGTTCAGAATGTCCGACATACCCAAA
CTACTGTAACAAGTCACTGAAGTGAAAACCTTTCATTAAATTTTTAGCAG
CGACAGATGCCAACAGGTTGATTGAAATATAGAGTCGATCTTGTTAAGAA
ACAATCAGATAAGTTTGAAAACAGGCTCGTAAAGTTTCTTCAAGCAAGAG
TACCATTGAATGCATGAATGGGCATTCAAGCAAAACTTGTTTTTCATTCA
GCAAGCTCGCTTTGGATAGCATTCATGGCTTATCTAACAACAGGCAGCTG
CTAATTCATCGAAATGATTGTCAATTTCGGAAACATATTCTTTTCCCCAA
GAATTCTCGGTTTTCGGGAACTTCCCGTTTCGCTTGTTTCTAACCATAAC
GACTCCAAAAACAGCCACGCCCTTTTCAAAGATCGGTGTAGAAAGTAATC
TCAAACCATTCAGAAAGTGTTCGATCAAAATTCAATAATTCGGCATATCG
ATGTTTCTATCCGCAAGACATTTGTTCGATATCTGTTTGATTCGCAAGAT
CGGAGTTGAGTGACTACCTGGTCCATCAGAGCTTGAGTGTAAGCGTTTTG
CTAAGTCCAAGCTTGGATAGACGTGGAGTTCAGTAACTACCGATCAAGTT
CTGAAAGCATTAGGGGTANCTACCTGGTCTATCAGAGCTTGAGTGTAAGC
GTTTCGCTAAGTCCAAGCTTGGATAGACGTGGAGTTCAGTAACTACCGAT
CAAGTCCTGAAAGCATTAGGGGTGACAAGCCAAAATACACGCAAGTCATC
GAGAAGAGTGAGCAGCTTCTTCAAACAACCAAGTAAATAACAAACATATC
CAACAGTACACATAGCCTTTGTTTTAACAAAACAAATTGAACAATCATCT
CTTCGTTCTCTTGAAAATAGTGTTCTCGAAATTCACAGCAAATCGGTTTC
ATGGTAACTGTTCGGTAATTCGTATTTCAGTCTTCTTCAATTTTTATAAG
TTTTTAATTTTTGCGATTTTTTTGTTGTGTCCCTCCATAACTGCCTATCA
CCATTAGGCTATCCCGGTTGAGCCCCCAGATGTCGTGTTGCTCAAGGCTG
ATCATACCTGAGCTAATGACAACAAAATTTATATTTAAAAGTTTTTCCCG
GATATCGGCCTGACTTACCGCTGGAAGGTAAGGAGACGGGTTGGTACCCT
TTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGAGTG
GACACGAATTTAGTTCATTATAAGTACTCAATATTAAAACACGATACCAA
CAATAAAATCCAAATAAATATATACAAAAAGTTCATAAGATATCCACGTC
TGGATGCGCCGTTCACTGCAGATTATTACGACTTGGGTTTTATTTCACTC
TGCGGAGATTCCCAACTCCGCAGTCTTTTCCTTCTCTGGGTTTAACTCAG
CAATGCCAAAAAATCTAATACATAATTTCTCTTCCTGGGCCGTACCGCTC
GGTGGCCAATAAATCATTTTGACACCGTCGACCGGCTCCTTCGGAGTCCG
GTGGGCGAGTGTTCTTTTTTGTAAAACGAAAATGTTCTTTTGAAATCAAA
GTCTTTAATAATTTACACACATTCATATTTTTGTAGCTTCTTTCTAGATT
CTAGATTATTCTTTAGTTTCTTCACCATGACACTATCCTCACTAGAATTT
TGAGGAAAATATTATCCCCTCCTGTCGGTAAAGGTGGCACGGGGGTTATG
AGACGGGGGTGTTAATGTAATGTTTGTTCTTTTAGAGCGTTTTATCTCCA
CGTGCCTCATCGTGTCTAATTATAATCGTAGGCAAATGGGAATATTTTGA
AAAATGGACGTACTTTATTTTGATCCAATCAAGTTTAAAATTCCAACGCG
TCCTGGTAAGATAGAAAATATTCGAGAACTTCATTCTTGATATAAACAAT
ACAAAATACCCACACATTGTTTCTATCCTAAGGGGTAATGAAGATTTTAT
AAAAAGACAAATTAATATAGTTCCCGTCCCTAATTCAACTATCGAAAGCG
TAACTCTCAAACTTTGGTTTTCAGATGATCGCACCCCTCTCAGTTGGTCA
ATATAGTTTATGTTCAGCCGGTCTGCAAAATACACGAATGAGTGGCTGTC
ATGGTGATAGTGGAAGCCCTTTTGTTTGTTATGATGGCAAACATTGGGAA
TTACAAGGTGTAATGAGTTGGGGATCAAGATCATGTGGAGCCAATGAGAA
TGAGTACACTGTGTATGCCAGTGTTCATTATCTAAAAGAATGGATAATTG
AAACAATGACATTGGTTGGGTATCATTAATAATGATTTTGAAACAATTAG
TACGTAAGGCTGTATACTGAATTACTTATCTCGAATAAACATTTAATTGG
TCAAGATTGTGTAAGATCGCAAATGAAATAAAAGGCTAAAGGCTGTATAT
ATTTCAGCAATCAAATTACAAAAGAAATCTATTTACAATACGAAAATGAC
CCTTACTTAATGATCAATTTTTCAAATTATTTTTTACCGGAAAAAAAAAT
TATTCATCGATTTTGTGTGGTTCTTCCTTCAAATTGGTTATAACCGTTGT
GGATATCTACAATCTGGGCTCCGTTTATGTAGTAACGGTATATGTGGCGT
CGCCAATCTAGCCCAAATTCACATAAAATATAATTCAAAAATTTAGCTCT
CTCGCCAAAATAAGTCCTCGACAATTTTAAATTTTATTTGTTCTATTTTA
TAGCTTCATTTCATTGTCTTTAACAATATTATGCATCAAACTGCATTGTC
ACAAACAATATGCACACCAGCCTTACCTTTCAGTATTCAAAGACTTCAAA
GTCCTCTAAAAAATTCCTTGTTTTCTTTAGTAACCGGAATATATTTCGGT
TTGAAGGATGATTTTTCATCTTTTCTCAAAGTCTTTCTGTTCTTTCGGTC
ATGTTTTCGTTTTCGGAATTTCTTGATATGGTGTTTAGCATGTTGGAGAT
TATGTCGAATCTTTTGTTTTCTATGTCGTCGATGATGTTTCTTCTTTCTT
TTTTGTTGTGTTTTAGGAATGTAACTTGGTTTGAATGTCTCCTTAGGTTC
AATCTTCCTCTGAGTTTTTTTATGTTTAAGTTTCTGAACATGTTTATGTA
GTTTCACACGTTTTGCATTGAGATGTTTTTTCGATTTCGTCGAATGTTTT
GCCTTCTTCGTTTTCTTTTTACGATGTTTGTTATGGTGAGCCTTTGTGTT
TGGTATGTATCCAGGCTTGAATGGTCCCTTAAACGTGATTTTAACACCCT
TCTTTTTATTCACTGGGGACGGAGGAGGCGGGTGATAAACACGTGAAGTT
GCACATTTTAATTGCCATCTTCCATTAGAAAAATTGCCTTTACAATGAGC
TCTCTTCTTCTTTTGAATTTCAGCAGCTTGTGCAAAATCCCAGTTCGGTG
GTATGCGTCCTGCTGCTAAATCAGGGTTAAGGGGTGGTGCCCTAGTAGCA
GGGGGTCGGGTCGAGACCAATACCTCTTCCTCTTCTTCAGGACCTACAGG
CTCAAGAACAACGGGCTCTTCTTCCTCCTTTTCAAGATGCTCTTCTTCAA
TTCTCTCATGCTCTTTCTCTACCTCTTCATGCTCCTTTTCAATTTTCTCG
TCAACTGTTTCTTCCTGTTCTTCTTCGTGACCAATCTTTCCCTCAGTTGA
ACTATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016744TCONS_00016744Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016744-proteinTCONS_00016744-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:159313..168468 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.02	0	0	0.35	0.12	0.46	0.5	0.24	0.18	0.03	0	6.27	4.35	0.09	0.17	3.53	2.14	16.5	15.65	10.39	10.33	3.85	3.95	5.4	6.2	0	0.09	0.02	0