XLOC_009370 (gene) - C. hemisphaerica

Overview
NameXLOC_009370
Unique NameXLOC_009370
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:16778..20247-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009370 ID=XLOC_009370|Name=XLOC_009370|organism=Clytia hemisphaerica|type=gene|length=3470bp|location=Sequence derived from alignment at sc0000248:16778..20247- (Clytia hemisphaerica)
CTCCTCGTCTTTCATCTCGTCTCAAGTCGTGTGCATGAATGTCGACCAAA
GTCGACATCCCCACTCCATTGCCCTGATAACCATCAGTTCCCTGTACTTT
TTGGCGATGCCAAGCCGTTTGAATAAGTCGTCGTTCTTGGCGCACCAGAC
TCCACGTATAGAGATAATCAAGGCGGCATGCTTGATATCTTCTCGACCAG
TAAGATTGCGGACATAGTCATTGACAGGCTCAGAGTTGTAAATTTGAGCT
TTGTGGTCCCAGTTGCCATTCAAGGTGATCGTATTACCATGTATTCGCAT
TCTGCCGGTGACGATGGAAACGTCTATTATAGTAGCGGAGTCCGAGGACA
ACAATCAGATCAGGTTTATGAAGTTGTTGATTGTTTATACGGATGTGGTG
CTCGTATAAGACTCGAAGATTGGCGGCCTCGCAAGCAATTTGTAGAAGCT
TGGCGATAGAATCATGGCGCCGAATACGTAACGCGCGCGTCCTTGGACAT
CTGCTCAATATGTGGTTGACTGTCTCTTGGTATAGTTGGCAGTGTCTACA
GGCTTTGTCGTTAGCTCTACCTCGATTGCAGTTTTCGAGCGTTGGGAGTC
TGTTGATTCGAAGTTGGATTAGTCGGATGTAAGACTTCCCGGTGACGTGT
CTTGGCGCGTAGTTTAACCTGGTGCTACCGTTCGGGTTGGATAGACATTC
CCTTAGGTGGCTGCCGTCAATAGAGTCGTACAGGTTGCCAATACGTTGAT
TTTTGGTGTAATTCAGGGCATCCTCGACAGTGTGCTTGTTGATCATTGCT
AGCAGTTTCTGGCGCAGATCGTGTACGTAAGTCGAGTTGGCGAGGTCACG
TGTGGCTAAATCAGTTGAGTTTTCGAGATTTCGTAGACGTTTCAAGGTGT
AGCGTGGAATCGTCTCCTCGAATTTGCCGAAACCGAGTCCTCCTGTCGAG
ATTGGAGCGTGGAAGTACATCGTCGGAGTGTCGCTTGGGAGTCTTGTGAT
ATCCTTGATCGTCTTGCGTATTGCCAAGTCGAATGATTGTAGTAGACCCT
TCGTAACTCGTCCGAGGACGAGCTGATGGGTGAATTTAGGAATCACATTG
TCTCGCAACAGAGTTAATTTCTGTTGGGGTTTCANAGTCGGAGTGTCGCT
TGGGAGTCTTGTGATATCCTTGATCGTCTTGCGTATTGCCAAGTCGAATG
ATTGTAACAGACCCTTCGTAACTCGTCCGAGGACAAGCTGGTGGGTGAAT
TTAGGAATCACATTGTCTCGCAACAGAGTTAATTTCTGTTGGGGTTTCAG
GGGGGAGCCCTTAACCCTACCTAGCATTGATTCGAATTCGGTCAAGCTGG
GTTTCAACTTTCCCCTTGGGTCGTACTTAATCCCTAGGTACTTAAAGGGT
GAATCATAAGTATTAGATGGAATTGGTTTTCCGTTAATGGAATACGACCG
CTCGCGACTGACGACGATCACTCGGTCTTTCTTGGAAAGAAGGAACCGAA
AGGAGAAGCACTTTTTGGCATTGACTGACATAGACCGCTTCCGGAAGAAG
TCGGCCAAGATTTCAATGAGCCGGTTCATTCCTGCATGACTTTCAGCCAG
GAGAATGATGTCATCGGCGAAAGCGAGAGCGTTGGCAATTGAGTCTGAGA
TTTTCGCTCCTATCCACGGGGGGAGGAGGTCGAATAGCTCATCGAGGACA
AGGTTGAACAAGATGGGGGAGAGGGGATCTCCCTGCTTGACGCCCCGTAG
GAGACGGATTCGGTCAAGTTTCACTGGTCCGCATGAGATGTTCGTTGTGG
CGCCAGTGTATGTGTTGATGATATAGTCGATCATCTGTTCTTCTACCTTG
TGCCGTCGAAGTGCTCTGGTCAGACTATGGTGAGATACCGAGTCAAATGC
TTTACTCAGATCTATCCCGACAATGGATAAGGTAGAGCGACTCTTCCTGG
CTTTCTGAATTACTGAGTCAAGGATAAGAGTGTTTTGAGCAATACCATCC
ATGGGAAGGAAAGCCTTCTGTCTGGGATTGAGATGAAGCGCCTGAGTTAG
GCGTTTAGCGAGGATACGATGGAGAAGTCTCGCAATGACGCTACTAATCG
TAATCAGTCTCCAGTTGGAAGCGTCATAGAGTCCGTCCGGCTTTTTGGGA
ATCAGAGTAGTTCTATTCTTCTTCCACTGAACAGGTTGAGTTCCCGTGAC
GAGACAGTAGTTGAATATCATGCAGATCGAGCTCAGATTGGCAGCTTTTA
GGTCTTTGACTTTGAAGAAGTCAGGGCCTGCGGCCTTGTTGGGCATGTTT
TTCAACTCTCATTTGATCTCCTCAATGGTGATTGGGAGAAAAGTCGGATC
GCACGGATGAGGGGCTTCTCGATATTCGTGATTATCAGCAGGGCTCTCAG
ATTCGTAGATCCTCTGATACGTGTTACGAACACTTTCCGCAGTAAGAAAG
GTATCAGTTTCTTCGCAGGTGTCATTCAAGATGTTCGTAGTGAGTTGCTT
TCTACTACGTTTGAACATTTCTTGAAAACGGATGTAGCGCTTGAGACGTA
TACGTCGTCTATATGGCCTCCTATCCGGGGCAGGATTAACAGGTGGTCTC
CTGCGTTGAGGGGCTTGTCTCACGAAATGTTCGTTGATGTATCTCTCGAG
TTCGGGCGTAACATCGGCTCCGTGGTCAATAAAGCGGGTTAAAATCTGGC
CCAGTTCGATATCATCCTCTGCAATCTCTCTGATCTGTCGGAAGAATGGG
TCTCGACTATCAGGAGGCGTATCAGGGAACCCGGCATCGGGACCCTGATC
TTCGTCGTCACTGCCACTAGCGACGGGATTATCGTCCCTCTCACGGACGA
TGATGTCATTTAGGATGTTTCGATACTTTGCCGATTTCCGCTGACCCTTG
ATGGATTCTAGGGAGCGTTGTGGGAACTTACCGATGAGATACTGGTTCAT
AAAGCGAGTTTCAGGTGGTGCGCTCGCTTCGGAGACAGCTAAAAGCTTTA
GTTCCTCGTCAGACCATCGGGCCTTGACGCGTTGAACGTCTTGTGCCGCC
TCATGTTGGATAGGGTGAGCGTGGCGCATATGCTGACCCAGACCTTGTCT
GGTTCTGAACGACTGGTCGCAAAGCGTACAAGCGAACTCGTGAACAACAA
CCTGAGCGTTTGCATTACCTTCGCATCTGACGAAGTGAGTAGACACGGAT
CTGATGGATGGTTTGTGGCACTGGCACCTTGAGCAGAGATAGGTGATAGG
AGCATTAGGATGACCCCTTTTAGTGTGCTTTAACCAAGACGCATGATCAG
CGAAGTTGAGTTCACAACATCGATTGCCAATTGGCGGCTTCGAATAGATA
TATTCGAAGTTAATTGTTCCGATATCCTGTAGGGTTATCCGGTCCGGTCC
AGGGTCTGCAACGTGTATGGGGTTACCGTTTATCTCATTTAAATTTTCAT
TAGGAACAATTGTTTTCGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016757TCONS_00016757Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016757-proteinTCONS_00016757-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:16778..20247 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.23	39.75	9.98	5.9	1.98	2.14	0.77	2.67	0.3	1.46	0.2	0.29	0.54	1.06	0	0.08	0.05	0.04	0	0.07	0.05	0.02	5.54	3.87	0.08	0.09	0.09	0.37	0.17	0.15