XLOC_009437 (gene) - C. hemisphaerica

Overview
NameXLOC_009437
Unique NameXLOC_009437
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000253:185545..191400+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009437 ID=XLOC_009437|Name=XLOC_009437|organism=Clytia hemisphaerica|type=gene|length=5856bp|location=Sequence derived from alignment at sc0000253:185545..191400+ (Clytia hemisphaerica)
TATATAATGTGACAATTACCTGAgtgataaagaaaaacaaagccATATAA
ACACCAGGAATGTTCACATAAGTTACGTGCCAAGCACCAATGTTGAAATC
GACCGTCGTAAACATGAAATTAACTCCAGGTCCAACAATGAAACCAAGTG
CAAATGCCATTCCCATGGAAGAAAATCTACTGAGGACTTCTGAATCTGGA
TAACATCTTGCAATCTCTCCAGAAATCACCGACCTGAGTGGCCCATCAGC
GCCAGACACCAATCGGCCGAAAACCAAGAACCAAGGCGAGAAATGGAAAG
CATACATTATGTTACCGATGATAACTAAGGTGTTGCAGATCAGGAAGATT
TGACGTACTTTACGCGTGCGGTCGACCCACCGTCCGATGAAGACTGATAA
GATAACAGCTGCAATCAGGTACGAGGAAGCTACTAAGCTGTAGAATAGCT
TTGGCTGATCTGTGTTGATCATTTCCTTGATGTACAGCCAGAGTGTGAGA
AATGTCACCGAATATTCCATACctacaaaaaagaagaattgattTGTTCA
AAAACTGTTCGGGATGGTTAATATTGACTGATGAACGTCATTGAAAAGGA
TTGCTATCAGAGTAAGGAAAAACAAAGTAACTGGATTCGAATCAGTATTT
TATGATTCAAAACATACCTAGCATGATACACTCCAATGTGAAAGCTTTGG
TTGTCCAATAACGTTTGCGTTCCCATTGCTTGATGTCTACAGGCTCGTCA
CTCCCTGCTTCTTTATCTAggtttttgtacattttgttggTAAGATTAAA
GCTACGTATCTAGTATTCAGTATCCAGTatcgattttcaaattttaaatg
gaGAATTTCCAGCTATATATGAGTTTTCATGTCATAAATGTTTCAAATGA
AAGCACATGAAAGATTGATATTGAATCTAACGAACAGACCTTGCACTTTT
TATAGGTGTCTACACACGTTCTTAACACCTTATAAGGATATCCGGAGGTA
CGGCAGACAGACTTGTCAAACTGGTTTGACTAAGATCAACGGACTTTTAT
TGTTAAGAAATATGTGATTCagcgttttcattttattaatttcaattaat
ttcaattaatttcaattaattaacattAACTGCTAAACGTAGGAGGTCCA
TTTGGGGCTAACGACACTTCCGCTAGGCCCCAGAACGACATAACATAACA
CACAAAATGATTTCCGTCCTGGTCCTAACGACCATAACTTACGAAATTGC
CTATCCGACAAATGGTATAAAATCACCCAAAAATATGACCTAGAGAGGAA
AAGAGAAGAGAAGAGAAGGAGACACATACGAAAACAACAAACACCAAGAG
TCGCCGAGAAGCACGAGTTTAACATCCTTGTTTTTACCGTCTTTGGAGAA
GATTTAGTTAACGTCGAAAGTATCTTTGTTGGAATATTCTGAACTTTTTA
TATGGTGTTGGATTATCATTTAAATAACATGTAGaggtttttcacaaaaa
aacttaTTAATGATTGTTGGGAAATGGACATCAGTTCATCAGTTATCAGT
ATTTGGTTAAATTTGTGATTTTCTAAAACCATTTACTCTATACTAAAATA
TACTTAATTTTGTATCTCAAAATAGAGATCAATCTTGTCAGTTTCTTGTG
TCTTGGCCTTTCTATATATTCATATATAGATCATGCGAAAGCTACCTGGT
CGAACTTTAGGAAAAATTAGGGCCTGACCATTTAGCTTTTCCTTCTTAGT
TTTCACGCGTGTCAAAAAATTACCACACAAACAATAAAAACCACTTTGct
tatttttgtttgaagaagaaaatgaaagcgaCTGGTTTCTAATGTTTATA
TTTGTGATAGGCTTTTGATGTTGGGGCTTTAGCCAATCACCACgcttaaa
agctcatttaattttcatttcaaattaagATGAGAAAAATCAATGCTGTG
TGTcaacctgggcagattctcttactGTGCCATGACTTttactttgaaaa
tatttatcggtatcagaatctgctcggaaATTACTTCAACACcagactta
agggctctgaccatagtcaaaaaaaTTCGTTAATGGATATGttgataaaa
ctttttttttgttttccttgaCACCTATAACAAAAAACTGTCTTTACAAA
TTGTTTGGTGATTTATTGTGTcaaaagtaattaagaatttaattacacAA
ATTACataatgaactttaaaaagacgttaataaaatcttatatattaccc
tcttttacaaaaagtgctgaATTTCAATGcgtaattaacctttttctttC
GATAATTTTTTAAACTGTCTGCGAAGAATTGatctatttgaaatttttcg
gaaaaatcttCTGAATTGGtgtatcaaaaattatttaaatgcttttcttc
gaaaattaaaTGCTTTTCTTCGAAAAAAAATGGCATAGAAAATTGGTCGA
AAGCCggtattttgaagattttgagacaaagaagcttttacaaaaatttt
ccgaaaatctatttttagtttGGTTGAATATACACCTTCTGACGcaaaag
tattttcaaaatgttttttctctgCCGAAAATAAGGTCCCCAAAGTTTAG
ATTCTCCTCTTTGCAAAAGTCTTCGTTTTATTCTTCTTGGATCCATATAA
TAGCAATCAAATCATGTAATGTAAATCATGTAAATAAAGTGAATCCAAAT
GCTAGAGTCAAATCTCCCTATCAAGGATTCGACGCTCACTTACTTCTTAC
ATAGGTTGCGTGGcccgcgtggttttcatacaaacaCAGCAACATTTACC
AccagaaaatataaaaaatttaaaacgcCAAAACAAAAAAGTGCCAGGTT
CAATGAAGCACAAATTTTAAAGGCTTCATATTTTCTTGTTTGATAGGTTG
AAGATTCTCCTCTAGctttcggcttgaaactcaatgtcaAATAATTATTG
ATGAAAATCTTAAATCATGACAGCCTTGTTCTAtatgttatttaaaaaac
ttattttttcaatgattaTCTTTTGTGGAAAATAATTACAGTAGATACTT
TAAAATGATAcaaatttactttaatttttttgaaaatatatgtGCTTTGC
AGAGCTCAAAAGAAGGTGCCTGACCAATCAATGGACATTCAAATGACAGA
AGCTATAggtttcatttgatttttttctttttctaggcATTTGCTTATAA
TTATAAAATTTCACATGTTATAATTTTTCTATATTGTGCCATTTGTTATT
GCCACTTTTTTCTATTCCACTAAGGAGTATCATTTTCAAtgagtttctta
taaaaaatattattatctAGAAAAAAATGTACATTGCAGATATGCTATCT
TGATCTATATACAATTTATACAATTAAAATAGTGCAAAAAAGTTATAACT
ATTATAAAATTTACTTAATACAAATCACGGGAGCTCTCAATGATTTTCTC
CGTTTAATCAAAATTACTAAAGTCAGTAACGATACAATAACTCCAACCCC
ACATACATATTCAATCCATTCAAACAAAgctgctgatgtcagcaaagcTA
ATAAAGCTCCGAAGCGTGACATTGAGAGTCGAAGGCTCTCAGAGAATGTT
TGTACTTTAGAGCTGGTCATCTTTGCCATAACACCAACCAGGAATACTTC
ATCCATAATAACCACAATGGCAAATAAGGTGCCCCAAATGATCCATAAGA
CAATATTGACATACATTTGGGAATGTTGGAATCGCATGTAGATGAAGATG
AGCTCCATTATAGCTAAAGAGATCATACATATGATTGAGAGATTGTACAA
CATTCGATCAGAGAATGATTTTAAAGACATTATACCAAGAATAACAGCTG
AGATGCAACCGAAACCGAAGACAATGCCATTGAGTTCTGTAATGCTCATC
TCCATAACATCGACCACCATAATTGGCAACCACATATCAAATGCAACCAT
CCAGTACCAGAGAATGAAGGTGAGCGCGAGGATTAAGAGGGAATCTGCAT
TGGTTAGGATGGTACAGAGGATATGGTCAGCTTTGGATTGTTCAGCACTG
GATGTCGATGATGAGGAGGAGGTAGAGCTGTAGTTTGATGAGGAGCTGGA
TGTTAGGGATGAATCTTCAGTGATTACTGGAACAACTTGATTGGATGCTA
ACTTTGGGAATGCAAAGGGTCTTATAAACATACCAGACATTTCGAGTCGT
TGCATTTTGAATTTGTTACGTCGTTCTTGTTGATTGTCATGTGATGTTTC
AATCAAAGTGTCATCGTAAAAGTTGATGGTTGTTTCTTTTGGTTTGACTG
GAATCTGAACTGATTTTGTGAACCGATCTGATTGTGATTGGGTATTAGCG
TTGGATTTAGCATAAAAAAAGCTTGTTGTAACTGGTAGTGGTTTGATATC
TCCTGGTAAAATTGGTTTAAGGATGGCGTCAGCTTTGAGGTCGTACTCAC
GTGAGAGATCATGAACCATGAAGAAAACACATATCTGTAAAAAGACAGTC
AGTGATCATTAAATAAAAACTACTTTAATTCAGGATCTATAGTACATTAA
AGTAGACTTTAAGACTAAAATCCTAATACGAGTCCAATTTCGAACAAagt
atttttgggaaaaaatggttatttcttcatttttcgcttttttATAGTTG
ATAGAAAGATTTGCAATACCAAGGTATTGGTAAGGTAGATgaattctttt
ttataatatGACAATTACCTGAGTGATAAAGAAAAACAGTGCCATATAAA
CACCAGGAATGTTCACATAAGTCACGTGCCAAGCACCAATGTTGAAATCG
ACCGTCGTAAACATGAAATTAACTCCAGGTCCAACAATGAAACCAAGTGC
AAATGCCATTCCCATCGAAGAGAATTTACTGAGGACTTCTGAATCTGGAT
AACATCTTGCAATTTCTCCAGAAATCACCGACCTGAGTGGCCCATCAGCA
CCAGACACCAATCGGCCGAAAACCAAGAACCAAGGCGAGAAATGGAAAGC
ATACATTATGTTACCGATGATAACTAAGGTGTTGCAGATTAGGAAGATTT
GACGTACTTTACGCGTGCGGTCGACCCACCGTCCAATGAAGACTGATAAG
ATAACAGCTGCAATCAGGTACGAGGAAGCTACTAGACTGTAGAATAGCTT
TGGTTGATCTGTGTTGATCATTTCTTTGATGTACAGCCAGAGTGTTAGAA
ATGTCACCGAATATTCCATACctacaaaaaagaagaattgacttgttcaa
aaattgttcggGATTGTTAACCcggaggggggtactagggttgcgagctg
cgGGGGGGGGGTGTcaccgactttcgacccttggaCCCATACctggacta
aaaaggagaaaacaaagaaaaatcttgTGAGTTTTGCAATCCTTACTGGG
ACAAATTtcaccaattttgaccaaatttcgatctttctgggggtaaaaag
ttgaaattttcctatttttccgactgttagcgggactgaaatttgatttt
cagatttttccaacccttagcgggactttggaaatcgaAAAAAGGGTTGA
TATCAAAGTaaggaaaaacaaagaaactggATTCGAATCAGTATTCTATG
ATTCAAAACATACCTAGCATGATACACTCCAAGGTGAAAGCTTTGGTTGT
CCAATAACGTTTGCGTTCCCATTGTTTGATGTCTACAGGCCCGTCACTCA
CTGCTTCTTTATCTAggtttttgtacattttgttggTAAGATTAAAGCTA
CGTATCTAGTATTCAATATCTAGTATCgagtttcaaattttaaatggaGA
ATTTCCAGCTACAGAGATTTCATGTCATaaatttcaatgtttcaaaTGAA
AGCACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016854TCONS_00016854Clytia hemisphaericatranscript
TCONS_00016855TCONS_00016855Clytia hemisphaericatranscript
TCONS_00016856TCONS_00016856Clytia hemisphaericatranscript
TCONS_00016857TCONS_00016857Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:185545..191400 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.09	0.15	0.1	1.7	0.74	2.53	1.77	8.42	14.35	3.76	1.55	0.12	1.15	0.1	0.03	0.1	0.07	0.09	0.1	0	0	0	0.05	0.25	2.24	0	0	0.22	0