XLOC_009475 (gene) - C. hemisphaerica

Overview
NameXLOC_009475
Unique NameXLOC_009475
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000254:283598..290023+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009475 ID=XLOC_009475|Name=XLOC_009475|organism=Clytia hemisphaerica|type=gene|length=6426bp|location=Sequence derived from alignment at sc0000254:283598..290023+ (Clytia hemisphaerica)
TCAATTTTGTAAAGTTTGACGACTATTGAAGGattatttcaaaagatatt cAACTTTGCTTTTCAGTGTTATGGATGATGTTCCACAAGATGGAAGCGAA AACTGTGGAAAGGTGAGTAGGATGTGATGACGTATTTCAGTCATATTCGT GTCcctatattttattgtttttttgcctTCACCTTACTAACACAGCGTTA GTATGAATATGGTTAACCATACAAAcagagcgatggccaagtggtcaaag acGTCAGTGTCTCAAACCAGGGGTTCGTGGTTCGAATCCCCACTTCCTCC AATGTTtggttcagttcatagatagccgagccagCTGGCCGTGAACCGCg taaaaacaatcgaaagactgtcaaaagtcctagattactgggctatctaC GTAAAATATCCACTCTATCTATCTACGTCACGAACAtaacttgcctcgtt ttgaaataatggccatggtgattaactcccagcaaacttcattaaaacta ctttctattcataaacaagaagccgaagcggcgtgaaggcccagctgacg tggcaataaccaaatGTCGTTTGTAACGGGTACCTTGAGAGAATCAATGT TTGCGGAAtcgtatttttgcaattttagggtTTAAAGGAAACATCGAATC TTAGAATCCTAATGCACATTTTCGGCAGAGATTGAAATACGAAACAttga acattcaaaaagttaaaaaagtgaaaaatgaaaagaaagaaaccagctgc gctggaaggtcagggGAAGGTCAGCAATAATAAATGATACGcaatatatg tatataatagatttgcttaatgtttttgttactagtatgaaagaaaaaat cggtttaaataaattcacaaacttcaaatgtcaaatgttgaccgtcaaag ttcagaaatatcgatttaacccgtagcatcatgaaaaacattccaaactt attcaaatttacacgtgagctgtattttagtatcctttaatgaattacaa cataagtttacttgaaaaaattctctgtcaggtttgaaaaatccaaccac cgaCCATTTAGAGCGATAGATCCAAAATTGTCTGTTTTCACGGgctgcat catgaaaaacattccaaacttattcaaatttacacatgagctgtacttta gtatcctttaatgagttacagcataggtttacttgaaaaaattccctgtt aggtttgaaaaatccaaccaccgaccgttttagtttatttagagtaataa atccaaaattgaccattttcacgggtagcatcatgaaaaacattccaaat ttattcaaatttacactttagctgcattttagtatcctttaatgagttac agcataaatttacttgaaaaattctctgtcaggtttaaaaaatccAGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNgcattttattatcatttaatgaattaca acataagtttacttgaaaaaagtctcTGTCAAGCTTGAAATATAAAACTC CAACATCCAAATGCTCCCTGACCTAAAAAATACTTTGCCATAAAGagaat gaaatttgactttactaccaattcaatccaatatAACAGTAGGTCAAACA TCGTGCGGGTAGGCGAggcaaaaattctaaatcggccgctggtttagcct ggactactGGACTTGTTAATCTATTGCGCGCACANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggtggaaaatg tttgaaaggaggctaatacagcagaattaagacaaaaaagggaactttca aaaacattttcccaaaaattaataagtggaggggttggaataaaaatgtc ctaggtggaaaatttccgaaaaattaattagcggggggggacggctatta ggtacccgagagtaatcaccatggtaattgtttgaatacgaggcaagtga tgttcgtgacgtaatttataaaaagaCCTATTGGGGTAATACAAAAAACA TACCCATCATTCTGGAGCATGTAGAACCCCTTTTTACATCAGAAGGAAAC AATTTCAAATGGTTTTCAAATTTCAGGGTCAAATTGATGTCTGTTATACG CCAGCTCGAGATGGAATGAAATTCGAATATTATTGCACTGAAAGTTGTGA CTCGGATGATGTTGGATTTTATTATCGAATTGTCAAAAGTCCAGTTGGAG GTGAGATCGATTCAATGTTTTTATGAGAAAATTTCCGAAGGGGCTTAAAG AGAAAACTCTTGGGTTGGAAATGAAGGCACTTATTTCCAATTCAAAACGC GAGATCCACGAGGTTTTCACGAAAACATTGGATTGAAAATTAAATCTATC Actaggttttgaaaaatttaacggtttcaatctggcgttagaaaatgttg aaaggttgaagattcctaaAAAACCCAATGATTGATACACtgtttttttg agaaaagtaTTTGGAAAGATTTTGTTGGTCATCAATGATTTGTTTCCATA AACTTCGCTTTTAACATGTGAAAGCTGGGTCTAAACATTCGAAActtttt taaggttttcaatGTTAAGATTCGGCTAGCAGCAtctgatagaccttttc atagaTTACGTACACGTTTtccttataagaacatccaaaatttttgaagc ctttggatgttcttaactttttgagttttaagcctgaaaatgttcttaac atgttcttattttcaacattttgtgaataattctgACCATTTTTCTAATA agtagggtgtttttgagtccacaaagccttaaaatattcttatatatttt gctcttataaaaaacgtgtcaCGAGAAACGCTTACCTCGTTGTCAATGTA TTGCCATGGTAGttgattcccagaggagttcaaaagaagtttactctatt taaaaaaagtaacacTTGACGCATCAAGGGATTTGATCATCTAGATAATG GTTTTAAAACAAAGTAGTCGTTGCACtctaaataattttgaaaaggccta ttgatgtctctgaaaaacaaaaaacaataggGTCTCATATGCATCGAGTT TAAAGCGCAGACATctgtaaagcctgaagggctagataagcaactttaag ctttcttcagcaaaaaaaagtgaatatcggaaaaatattgttgctattgt tttccaaaacccgcgaagcttctgattggtcaatcgctgaaattctattg taNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgacattaaaaatcaatttgtattggaaaagtgtcaatt tttgtgacaccttactgtcagaaatgtcatcatgctcaaggtgtgaaaat ttttaggtgtcaaatgttttattattttgaagctaaataaagtttaggaa tttacagaaaatttcacggcaaaagctctattatttcaggagctattacc acaatgctggacaaaaggttggtagacttctgcaatatttgcaaaatact tcaatatcgatcaaaaacaagttcccaagaggctctgggtgNATAGTTta acctccgaacagaaagaggcccccctagtacgaatagggttaaagcccGA AGGTttagtagaatctctaacctttcccaggcaagaaaaggtgaagccac ttatttcccattcgGAATGCGCCTAGAACGTGCCGCAATcactttgtttt tgaggactgcatttttttttgaaatctagcgatagaccCGGTGTTTGTAT AAAAACCATGCGCGGGCGCGTTCGCGTatcttcatttcccatccaggagt ctcaagtctagtccttcgggcttggaagtcaatgctCATAGGGTGTATTA TATCTTACTTTGCAGCTGACGATTTATGGTGTACAAATCTCCCACAGTAT GATTGGCCCTCAAACTTACAACCGACGCCCCGAACTTTACCACCTAGAGG TACCACCCCGCCCAACTTAGATCAAGACTCCAGCAGTATCACCAACCAGG CTAAATACAGTGTCGTTTTAGCCTTGGCGTCTgtgatttgtttgtttttg tggaaGTAATTTATTGAATGTTTAATGATTGTAATAAGCTTGGGAACGGT TTAGAATATGCATTTATAATTAGTAGatacaacacccctgtctcataggC CCGATAGGATCCTTTCACTtggaatacacctttcccgcaATTCCCAAAAC AGATGCGCGCACATTATTTTtttgctctccaccgtttggtctctggaggt aaacaaacccgtttttgcctgcctTTCCTTAGGGGAAGTtagttttttga gcttttcttaagttcaaTCTTTAGAAAATGTTGTCTATATTAATTGCAAA ATCTATTATCCCCTGTAGTAGCCTCTAAACGCGCTTTTCCTAAGTTTACG GGTGTTATACTTTCAAAATctttagaaatttttgaaattctgaaacactt ttgattttaaatgtaaattgacaaattatttttatgaaattaatataaaC ATTATTTCTGGTTTAAATTACCAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016919TCONS_00016919Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016919-proteinTCONS_00016919-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000254supercontigsc0000254:283598..290023 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.18 0.26 0.28 0.18 0.12 1.39 2.1 1.78 2.08 3.9 1.65 22.83 21.79 14.22 15.29 6.71 5.89 54.21 43.35 13.65 13.74 13.08 12.5 14.34 16.43 5.55 5.84 80.17 62.25