XLOC_009503 (gene) - C. hemisphaerica

Overview
NameXLOC_009503
Unique NameXLOC_009503
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000255:347556..351912-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009503 ID=XLOC_009503|Name=XLOC_009503|organism=Clytia hemisphaerica|type=gene|length=4357bp|location=Sequence derived from alignment at sc0000255:347556..351912- (Clytia hemisphaerica)
NNTGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTACCATTTCAA
CTTACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCATTCATTGAC
CTTGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAAGCAATTAA
TTTGTACTTATATGTAGACACACCATACATGAAAATTGGGTTCAAGTGGG
CATTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACACTTACCAA
GTAAGTTTATCTAAAAAACAAAACCTTTTTTTAATTAAAATTCTCTGATT
TGTATAATTCAAGTTGCGCGAAAAATACAACTGTGTGAAAAAAATTTAGA
GGGGGCCTTTTTTTTGGACATGATGAAAAGATTTTGTCGAATGGAAGTAT
TTCAAAAGTTCTCAAAATTTTTTGTTTTGGAGGGGGATGTACGAACAAAG
GGTTGAGTAAAATTCTCTTTTATTTTCAATTTTTCAGTCAGGCAGTAGTT
CAACTTTGATAATATGTCCTATTTGTCATTGTACTTCACCACCAAACACA
GAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGTCTTGCTGC
TGACCAAGTAAGTATACCTTAAGGGAACCAAGTAAGTATACCTTATTTGC
ATTTGACAGTTTATAAAAATTGGCCAATCAAAATGCCTTAAGACCTGTCA
ATCAAACTGTTTTATACAAATATTATAGGAATTACTTTCAATGGTGCCTT
TCAAATGAACCTAGCTGTTATTGAGCCAGTTTACACCCTAGATGAGGTTT
CTTGTTACACTCAAAAAGAGTCATTCTTTTGAGGACCTTGATGGCATCTT
TGATGGAAGTTTGTGTAGGTGGCAGGATTGGGTCATCAATTTTTTAGACA
TCAAAAAAGCTGTGCGATTTGAAAAAATTTTCGAATTACATGAGCTTTCT
CACAATGTTTTCAGGCTTAGCCCTAAGTCTGAAGGGACCGAAGATTTTGT
TTGAATTATATGAGTTTTCAAATTATAGGAATTACATGAGTTTAACTGTA
ATCATAACTTTCTTTGCTTTCTCTTTATAGGTACGGCCCATGGAGATTGA
AGATGGTCGAGTTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATG
GTCAATTCGAAGATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAA
GTTGATGATGGTCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACAT
TAGAATGTCACAGGCTGAGCCCATACAACCAACCACATCATTTATCAATT
CTGTGCAAACTCCGTAAGATTTAACTTCTACTGGAATTTTTTTAGTTCTG
TTCAACTTGTTTGTACTTATTAGATGTTAGTACTTATTAGAAAGACTGTT
TAAACATTATAAGAATAATGAAAATTTTTTGTTTACAGAATAAGTGCTGT
ACCATCACATCCCAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAA
CACTNCTGCTGACCAAGTAAGTATACCTTAAGGGAACCAAGTAAGTATAC
CTTATTTGCATTTGACAGTTTATAAAAATTGGCCAATCAAAATGCCTAAA
GACCTATCAATCAAACTGTTTTATTCAAATATTGTAGGAATTACTTTCAA
TGATGCCTTTCAAATGTACCTAGCTGTTATTGAGCCAGTTTACACCCTAG
ATGAGGTTTCTTGTTACACTCAAAAAGAGTCATTCTTTTGAGGACCTTGA
TGGCATCTTTGATGGAAGTTTGTGTAGGTGGCAGGATTGGGTCATCAATT
TTTTAGACATCAAAAGTCAAAAAATTCGAATTACATGAGCAAAAAAGCTG
TGCGATTTGAGAATATTTTCGAATTACATGAGCTTTCTCACAAGGTTTTC
AGGCTTANTCACATCCCAGACAGCCAACCACATCATCTGTCAATTCTGTG
CAAACTTCGTAAGATTTAACTTCTACTGGAATTATTTTTCAACTCTGTTC
CATTTACTAAATATTCAAAGGCTTCAAAGTAAACTTGCAACAATCGATGT
TTGTACGTATAAGAAAGACTGTTAAACATTATAAGAATAATGAGAATTTT
TTGTTTACAGAATAAGTGCTGTACCATCACATCCCAGACAGTCAACCACA
TCATTTGTCAATTCTGTGCAAACACCGTAAGATTTAACTTCTACTGGAAT
TATTTTTCAACTCTGTTCAATTTACTACATATTCAAAGGCTTCAAAGTAA
ACTTGCAACAATTGATGTTTGTACTTATAAGAAAGACTGTTAAACATTAT
AAGAATAATGAGAATTCTTTGTTTACAGAATAAGTGCTGTATCATCACAT
CCTAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCGTAAGA
TTTAACTTCTACTGGAATTTTTTAGATTTATAGGCTATAAAGTCTTTGGG
CTTTTTCTTGGGTTGTTCTTATCTCTTGGCTGCTTTGGGGCTTCTTAGGG
GAAAGAATGCACCCCATAATAGTCCTAATGGAGTCTTTTAGAGATTCAAT
ATAAATTTCCCAGAATTTCCGTATAATTATTTACAAAAGATAAGTACATC
ATTCTTCGATCCCTAATTCATACACTTAGAGCTTAAAAGCATTTTCATGA
TAACCAAACGAAAAATGTCCTTTAACTATATTTATGTTTTGTTTTTTATC
AACGTAAATTATTTCATTTGGAAATTATTTTGTTGTAAAACAATGAAAGG
CTATAATTCAAATAGTGGGTAACCATAGTAACAAAGCAACCATAGTAAAC
GTTCCAGGTGTTATTATTTTCAAGAAATCATATTTATAAGAGTAAGGCAA
AGGAGAGAACGAAAAACGAAATAACTCGAAAAACTAACGCACATCGCTGA
AGAAAAAACTATTTAAAATATCTTTGTGGTTCCCAAAGCTAAAAGCCATA
AGAAGTAACCAGAAAGAATGAAAATACACCACTCTCAGTACTCTTTTTTA
TAAGTATACAAGAAAATTCGCTTAAGCTTGATATACTTAGCAAATTTTTA
TTTTTGCTTAGATTTAGACCTCTTGAATTCTATTTATTGGCTTCATTCGG
TTAAATGCCAAAGATCGGTGGTATTATTGAGAAAAGACATGACTCAAGAA
ATGATTTGGACAGTTAAGATGAACTGCCTGCCAGAAATGGCAGAAGGCCT
AGAATAGACACTTTTAATGAGTTTTAGAAGTCATTAACAGATGTGAAAAG
ACGAGAGAATGATAAATGCGCTTGGGGAATTTAAATTAGATTCAGAGTTG
TAATCAGAACCATATAAGTAAAATTTCCGTTTTTACATCCACTCGAGTTT
CTTTGTTACTTATTCTCTTGTTTCTCTGTTTGTTTGTTTCTCATTTCCAG
TCAGTGTCGGTTCTCTCCTAAATTATTTTTCCCTGGTATGTTATTCAATT
TGTTAACTTTTTGACAAAAGATGTAGGAAACAACACAATCACAATTCATA
ACAGTGTAAATGGAAGCCCCTCTGATCGAGTGACGAAAGAGAACTTTAAA
TTACTTGATTTACCTGGTCTGAACTGAATGGTGTATATTTTTCATTTTAG
TGCAACTGGGGCTATTGACACCACCTCCGATCTTGNTATTACTTAATTTA
CCTGGTCTGAACTGAATGGTGTATATTTTTCATTTTAGTGCAACTGGGGC
TATTGACACCACCTCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGA
TGTAAGTATGTTAAAAATCTGGTACATTCTTCAGTTATGTTATCTTGAAC
TTACAAAAAATGCGTCAGAAGGGTACAGATTTTTCTCCATTTTTTAATAA
AAAATCAATTATCTTTTATTACGCCTTCAGTATATATCGATGCAAAATAT
TTTCACGTAGATTTTTCAACCAATTGATGAGATAAAAATAAGCACGGTTT
TTGTTTACTCAAGGTTTGACCACGTGTATAAATTGCTTTTAAATAGGAAA
CCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAATTGA
AGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGATTT
GTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGCAACG
AAGGCTGATACGAAATATATCGATTCTGAGTTATACGATGACATCATTGA
AATATGGCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAGGACA
GATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGACACACTAAGG
AAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGACATT
CACTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016981TCONS_00016981Clytia hemisphaericatranscript
TCONS_00016980TCONS_00016980Clytia hemisphaericatranscript
TCONS_00016979TCONS_00016979Clytia hemisphaericatranscript
TCONS_00016978TCONS_00016978Clytia hemisphaericatranscript
TCONS_00016977TCONS_00016977Clytia hemisphaericatranscript
TCONS_00016976TCONS_00016976Clytia hemisphaericatranscript
TCONS_00016975TCONS_00016975Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016977-proteinTCONS_00016977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:347556..351912 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05	1.68	1.07	0.42	12.76	9.44	13.24	14.59	5.74	9.5	8.13	7.86	8.22	6.78	3.13	3.23	2.42	2.83	4.19	4.39	4.13	4.78	2.79	2.78	11.4	13.28	11.06	10.67	0.86	0.38