TCONS_00016977 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016977
Unique NameTCONS_00016977
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016977 ID=TCONS_00016977|Name=TCONS_00016977|organism=Clytia hemisphaerica|type=transcript|length=1158bp
NTGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTACCATTTCAAC
TTACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCATTCATTGACC
TTGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAAGCAATTAAT
TTGTACTTATATGTAGACACACCATACATGAAAATTGGGTTCAAGTGGGC
ATTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACACTTACCAAt
caGGCAGTAGTTCAACTTTGATAATATGTCCTATTTGTCATTGTACTTCA
CCACCAAACACAGAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGA
AAGTCTTGCTGCTGACCAAGTACGGCCCATGGAGATTGAAGATGGTCGAG
TTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATGGTCAATTCGAA
GATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAAGTTGATGATGG
TCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACATTAGAATGTCAC
AGGCTGAGCCCATACAACCAACCACATCATTTATCAATTCTGTGCAAACT
CCaaTAAGTGCTGTACCATCACATCCCAGACAGCCAACCACATCATTTGT
CAATTCTGTGCAAACACCAATAAGTGCTGTATCATCACATCCTAGACAGC
CAACCACATCATCTGTCAATTCTGTGCAAACACCtgcAACTGGGGCTATT
GACACCACCTCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGATGAA
ACCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAATTG
AAGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGATT
TGTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGCAAC
GAAGGCTGATACGAAATATATCGATTCTGAGTTATACGATGACATCATTG
AAATATGGCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAGGAC
AGATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGACACACTAAG
GAAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGACAT
TCACTGAC
Run BLAST on NCBI

protein sequence of TCONS_00016977-protein

>TCONS_00016977-protein ID=TCONS_00016977-protein|Name=TCONS_00016977-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
XHEICRQQFKIASTISTYLATYHGRKIQDSFIDLGSYYEEYVKEKKKAIN
LYLYVDTPYMKIGFKWALEQNKSSDDDNDDTYQSGSSSTLIICPICHCTS
PPNTECVRCVQNSELEESLAADQVRPMEIEDGRVDDGQFEDDQFEDGQFE
DGQVDDGQFEDGQVDDGQVRNARLNFFNNIRMSQAEPIQPTTSFINSVQT
PISAVPSHPRQPTTSFVNSVQTPISAVSSHPRQPTTSSVNSVQTPATGAI
DTTSDLASSVFRHSLMKPAIKEWAVCSICTNEIEDSPAHLLSCKCRFHRI
CLEMWTEKSMNCPTCATKADTKYIDSELYDDIIEIWHYKFSDVVNIDLKD
RSDLSIRRSNLYTDTLRKIPRIFKKGLVPLNVTFTD
Run BLAST on NCBI

transcript from alignment at sc0000255:347556..351911-

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016977 ID=TCONS_00016977|Name=TCONS_00016977|organism=Clytia hemisphaerica|type=transcript|length=4356bp|location=Sequence derived from alignment at sc0000255:347556..351911- (Clytia hemisphaerica)
NTGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTACCATTTCAAC
TTACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCATTCATTGACC
TTGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAAGCAATTAAT
TTGTACTTATATGTAGACACACCATACATGAAAATTGGGTTCAAGTGGGC
ATTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACACTTACCAAG
TAAGTTTATCTAAAAAACAAAACCTTTTTTTAATTAAAATTCTCTGATTT
GTATAATTCAAGTTGCGCGAAAAATACAACTGTGTGAAAAAAATTTAGAG
GGGGCCTTTTTTTTGGACATGATGAAAAGATTTTGTCGAATGGAAGTATT
TCAAAAGTTCTCAAAATTTTTTGTTTTGGAGGGGGATGTACGAACAAAGG
GTTGAGTAAAATTCTCTTTTATTTTCAATTTTTCAGTCAGGCAGTAGTTC
AACTTTGATAATATGTCCTATTTGTCATTGTACTTCACCACCAAACACAG
AATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGTCTTGCTGCT
GACCAAGTAAGTATACCTTAAGGGAACCAAGTAAGTATACCTTATTTGCA
TTTGACAGTTTATAAAAATTGGCCAATCAAAATGCCTTAAGACCTGTCAA
TCAAACTGTTTTATACAAATATTATAGGAATTACTTTCAATGGTGCCTTT
CAAATGAACCTAGCTGTTATTGAGCCAGTTTACACCCTAGATGAGGTTTC
TTGTTACACTCAAAAAGAGTCATTCTTTTGAGGACCTTGATGGCATCTTT
GATGGAAGTTTGTGTAGGTGGCAGGATTGGGTCATCAATTTTTTAGACAT
CAAAAAAGCTGTGCGATTTGAAAAAATTTTCGAATTACATGAGCTTTCTC
ACAATGTTTTCAGGCTTAGCCCTAAGTCTGAAGGGACCGAAGATTTTGTT
TGAATTATATGAGTTTTCAAATTATAGGAATTACATGAGTTTAACTGTAA
TCATAACTTTCTTTGCTTTCTCTTTATAGGTACGGCCCATGGAGATTGAA
GATGGTCGAGTTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATGG
TCAATTCGAAGATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAAG
TTGATGATGGTCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACATT
AGAATGTCACAGGCTGAGCCCATACAACCAACCACATCATTTATCAATTC
TGTGCAAACTCCGTAAGATTTAACTTCTACTGGAATTTTTTTAGTTCTGT
TCAACTTGTTTGTACTTATTAGATGTTAGTACTTATTAGAAAGACTGTTT
AAACATTATAAGAATAATGAAAATTTTTTGTTTACAGAATAAGTGCTGTA
CCATCACATCCCAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAAC
ACTNCTGCTGACCAAGTAAGTATACCTTAAGGGAACCAAGTAAGTATACC
TTATTTGCATTTGACAGTTTATAAAAATTGGCCAATCAAAATGCCTAAAG
ACCTATCAATCAAACTGTTTTATTCAAATATTGTAGGAATTACTTTCAAT
GATGCCTTTCAAATGTACCTAGCTGTTATTGAGCCAGTTTACACCCTAGA
TGAGGTTTCTTGTTACACTCAAAAAGAGTCATTCTTTTGAGGACCTTGAT
GGCATCTTTGATGGAAGTTTGTGTAGGTGGCAGGATTGGGTCATCAATTT
TTTAGACATCAAAAGTCAAAAAATTCGAATTACATGAGCAAAAAAGCTGT
GCGATTTGAGAATATTTTCGAATTACATGAGCTTTCTCACAAGGTTTTCA
GGCTTANTCACATCCCAGACAGCCAACCACATCATCTGTCAATTCTGTGC
AAACTTCGTAAGATTTAACTTCTACTGGAATTATTTTTCAACTCTGTTCC
ATTTACTAAATATTCAAAGGCTTCAAAGTAAACTTGCAACAATCGATGTT
TGTACGTATAAGAAAGACTGTTAAACATTATAAGAATAATGAGAATTTTT
TGTTTACAGAATAAGTGCTGTACCATCACATCCCAGACAGTCAACCACAT
CATTTGTCAATTCTGTGCAAACACCGTAAGATTTAACTTCTACTGGAATT
ATTTTTCAACTCTGTTCAATTTACTACATATTCAAAGGCTTCAAAGTAAA
CTTGCAACAATTGATGTTTGTACTTATAAGAAAGACTGTTAAACATTATA
AGAATAATGAGAATTCTTTGTTTACAGAATAAGTGCTGTATCATCACATC
CTAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCGTAAGAT
TTAACTTCTACTGGAATTTTTTAGATTTATAGGCTATAAAGTCTTTGGGC
TTTTTCTTGGGTTGTTCTTATCTCTTGGCTGCTTTGGGGCTTCTTAGGGG
AAAGAATGCACCCCATAATAGTCCTAATGGAGTCTTTTAGAGATTCAATA
TAAATTTCCCAGAATTTCCGTATAATTATTTACAAAAGATAAGTACATCA
TTCTTCGATCCCTAATTCATACACTTAGAGCTTAAAAGCATTTTCATGAT
AACCAAACGAAAAATGTCCTTTAACTATATTTATGTTTTGTTTTTTATCA
ACGTAAATTATTTCATTTGGAAATTATTTTGTTGTAAAACAATGAAAGGC
TATAATTCAAATAGTGGGTAACCATAGTAACAAAGCAACCATAGTAAACG
TTCCAGGTGTTATTATTTTCAAGAAATCATATTTATAAGAGTAAGGCAAA
GGAGAGAACGAAAAACGAAATAACTCGAAAAACTAACGCACATCGCTGAA
GAAAAAACTATTTAAAATATCTTTGTGGTTCCCAAAGCTAAAAGCCATAA
GAAGTAACCAGAAAGAATGAAAATACACCACTCTCAGTACTCTTTTTTAT
AAGTATACAAGAAAATTCGCTTAAGCTTGATATACTTAGCAAATTTTTAT
TTTTGCTTAGATTTAGACCTCTTGAATTCTATTTATTGGCTTCATTCGGT
TAAATGCCAAAGATCGGTGGTATTATTGAGAAAAGACATGACTCAAGAAA
TGATTTGGACAGTTAAGATGAACTGCCTGCCAGAAATGGCAGAAGGCCTA
GAATAGACACTTTTAATGAGTTTTAGAAGTCATTAACAGATGTGAAAAGA
CGAGAGAATGATAAATGCGCTTGGGGAATTTAAATTAGATTCAGAGTTGT
AATCAGAACCATATAAGTAAAATTTCCGTTTTTACATCCACTCGAGTTTC
TTTGTTACTTATTCTCTTGTTTCTCTGTTTGTTTGTTTCTCATTTCCAGT
CAGTGTCGGTTCTCTCCTAAATTATTTTTCCCTGGTATGTTATTCAATTT
GTTAACTTTTTGACAAAAGATGTAGGAAACAACACAATCACAATTCATAA
CAGTGTAAATGGAAGCCCCTCTGATCGAGTGACGAAAGAGAACTTTAAAT
TACTTGATTTACCTGGTCTGAACTGAATGGTGTATATTTTTCATTTTAGT
GCAACTGGGGCTATTGACACCACCTCCGATCTTGNTATTACTTAATTTAC
CTGGTCTGAACTGAATGGTGTATATTTTTCATTTTAGTGCAACTGGGGCT
ATTGACACCACCTCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGAT
GTAAGTATGTTAAAAATCTGGTACATTCTTCAGTTATGTTATCTTGAACT
TACAAAAAATGCGTCAGAAGGGTACAGATTTTTCTCCATTTTTTAATAAA
AAATCAATTATCTTTTATTACGCCTTCAGTATATATCGATGCAAAATATT
TTCACGTAGATTTTTCAACCAATTGATGAGATAAAAATAAGCACGGTTTT
TGTTTACTCAAGGTTTGACCACGTGTATAAATTGCTTTTAAATAGGAAAC
CAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAATTGAA
GATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGATTTG
TTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGCAACGA
AGGCTGATACGAAATATATCGATTCTGAGTTATACGATGACATCATTGAA
ATATGGCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAGGACAG
ATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGACACACTAAGGA
AAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGACATTC
ACTGAC

Coding sequence (CDS) from alignment at sc0000255:347556..351911-

>TCONS_00016977 ID=TCONS_00016977|Name=TCONS_00016977|organism=Clytia hemisphaerica|type=CDS|length=10422bp|location=Sequence derived from alignment at sc0000255:347556..351911- (Clytia hemisphaerica)
GAAACCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAA
TTGAAGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGG
ATTTGTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGC
AACGAAGGCTGATACGAAATATATCGATTCTGAGTTATACGATGACATCA
TTGAAATATGGCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAG
GACAGATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGACACACT
AAGGAAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGA
CATTCACTGACTGCAACTGGGGCTATTGACACCACCTCCGATCTTGCATC
TTCAGTCTTTCGACACAGTTTGATAATAAGTGCTGTATCATCACATCCTA
GACAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCATCATTTGTC
AATTCTGTGCAAACACCATCCCAGACAGCCAACCACAATAAGTGCTGTAC
CATCACGTACGGCCCATGGAGATTGAAGATGGTCGAGTTGATGATGGTCA
ATTCGAAGATGATCAATTCGAAGATGGTCAATTCGAAGATGGTCAAGTTG
ATGATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCAAGTTAGAAAT
GCGAGGCTCAACTTTTTTAACAACATTAGAATGTCACAGGCTGAGCCCAT
ACAACCAACCACATCATTTATCAATTCTGTGCAAACTCCTCAGGCAGTAG
TTCAACTTTGATAATATGTCCTATTTGTCATTGTACTTCACCACCAAACA
CAGAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGTCTTGCT
GCTGACCAANTGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTAC
CATTTCAACTTACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCAT
TCATTGACCTTGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAA
GCAATTAATTTGTACTTATATGTAGACACACCATACATGAAAATTGGGTT
CAAGTGGGCATTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACA
CTTACCAAGAAACCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCAC
TAATGAAATTGAAGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGT
TTCATCGGATTTGTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCC
ACTTGTGCAACGAAGGCTGATACGAAATATATCGATTCTGAGTTATACGA
TGACATCATTGAAATATGGCATTACAAATTTTCGGACGTTGTAAATATAG
ACTTGAAGGACAGATCTGATCTCTCAATAAGAAGATCTAATTTATACACC
GACACACTAAGGAAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTT
AAATGTGACATTCACTGACTGCAACTGGGGCTATTGACACCACCTCCGAT
CTTGCATCTTCAGTCTTTCGACACAGTTTGATAATAAGTGCTGTATCATC
ACATCCTAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCAT
CATTTGTCAATTCTGTGCAAACACCATCCCAGACAGCCAACCACAATAAG
TGCTGTACCATCACGTACGGCCCATGGAGATTGAAGATGGTCGAGTTGAT
GATGGTCAATTCGAAGATGATCAATTCGAAGATGGTCAATTCGAAGATGG
TCAAGTTGATGATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCAAG
TTAGAAATGCGAGGCTCAACTTTTTTAACAACATTAGAATGTCACAGGCT
GAGCCCATACAACCAACCACATCATTTATCAATTCTGTGCAAACTCCTCA
GGCAGTAGTTCAACTTTGATAATATGTCCTATTTGTCATTGTACTTCACC
ACCAAACACAGAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAA
GTCTTGCTGCTGACCAANTGCATGAAATTTGCCGCCAGCAATTTAAAATA
GCCAGTACCATTTCAACTTACTTGGCTACCTATCATGGAAGGAAAATACA
AGATTCATTCATTGACCTTGGAAGCTATTATGAAGAATATGTGAAAGAGA
AGAAGAAAGCAATTAATTTGTACTTATATGTAGACACACCATACATGAAA
ATTGGGTTCAAGTGGGCATTAGAACAAAACAAAAGTAGTGATGATGACAA
TGATGACACTTACCAAGAAACCAGCAATCAAAGAATGGGCAGTATGTTCC
ATTTGCACTAATGAAATTGAAGATTCGCCAGCTCATCTTCTTTCCTGCAA
GTGCAGGTTTCATCGGATTTGTTTAGAGATGTGGACAGAGAAAAGTATGA
ATTGCCCCACTTGTGCAACGAAGGCTGATACGAAATATATCGATTCTGAG
TTATACGATGACATCATTGAAATATGGCATTACAAATTTTCGGACGTTGT
AAATATAGACTTGAAGGACAGATCTGATCTCTCAATAAGAAGATCTAATT
TATACACCGACACACTAAGGAAAATTCCTAGAATCTTCAAGAAAGGACTG
GTTCCTTTAAATGTGACATTCACTGACTGCAACTGGGGCTATTGACACCA
CCTCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGATAATAAGTGCT
GTATCATCACATCCTAGACAGCCAACCACATCATCTGTCAATTCTGTGCA
AACACCATCATTTGTCAATTCTGTGCAAACACCATCCCAGACAGCCAACC
ACAATAAGTGCTGTACCATCACGTACGGCCCATGGAGATTGAAGATGGTC
GAGTTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATGGTCAATTC
GAAGATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAAGTTGATGA
TGGTCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACATTAGAATGT
CACAGGCTGAGCCCATACAACCAACCACATCATTTATCAATTCTGTGCAA
ACTCCTCAGGCAGTAGTTCAACTTTGATAATATGTCCTATTTGTCATTGT
ACTTCACCACCAAACACAGAATGTGTACGATGCGTCCAAAATAGTGAGCT
TGAAGAAAGTCTTGCTGCTGACCAANTGCATGAAATTTGCCGCCAGCAAT
TTAAAATAGCCAGTACCATTTCAACTTACTTGGCTACCTATCATGGAAGG
AAAATACAAGATTCATTCATTGACCTTGGAAGCTATTATGAAGAATATGT
GAAAGAGAAGAAGAAAGCAATTAATTTGTACTTATATGTAGACACACCAT
ACATGAAAATTGGGTTCAAGTGGGCATTAGAACAAAACAAAAGTAGTGAT
GATGACAATGATGACACTTACCAAGAAACCAGCAATCAAAGAATGGGCAG
TATGTTCCATTTGCACTAATGAAATTGAAGATTCGCCAGCTCATCTTCTT
TCCTGCAAGTGCAGGTTTCATCGGATTTGTTTAGAGATGTGGACAGAGAA
AAGTATGAATTGCCCCACTTGTGCAACGAAGGCTGATACGAAATATATCG
ATTCTGAGTTATACGATGACATCATTGAAATATGGCATTACAAATTTTCG
GACGTTGTAAATATAGACTTGAAGGACAGATCTGATCTCTCAATAAGAAG
ATCTAATTTATACACCGACACACTAAGGAAAATTCCTAGAATCTTCAAGA
AAGGACTGGTTCCTTTAAATGTGACATTCACTGACTGCAACTGGGGCTAT
TGACACCACCTCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGATAA
TAAGTGCTGTATCATCACATCCTAGACAGCCAACCACATCATCTGTCAAT
TCTGTGCAAACACCATCATTTGTCAATTCTGTGCAAACACCATCCCAGAC
AGCCAACCACAATAAGTGCTGTACCATCACGTACGGCCCATGGAGATTGA
AGATGGTCGAGTTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATG
GTCAATTCGAAGATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAA
GTTGATGATGGTCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACAT
TAGAATGTCACAGGCTGAGCCCATACAACCAACCACATCATTTATCAATT
CTGTGCAAACTCCTCAGGCAGTAGTTCAACTTTGATAATATGTCCTATTT
GTCATTGTACTTCACCACCAAACACAGAATGTGTACGATGCGTCCAAAAT
AGTGAGCTTGAAGAAAGTCTTGCTGCTGACCAANTGCATGAAATTTGCCG
CCAGCAATTTAAAATAGCCAGTACCATTTCAACTTACTTGGCTACCTATC
ATGGAAGGAAAATACAAGATTCATTCATTGACCTTGGAAGCTATTATGAA
GAATATGTGAAAGAGAAGAAGAAAGCAATTAATTTGTACTTATATGTAGA
CACACCATACATGAAAATTGGGTTCAAGTGGGCATTAGAACAAAACAAAA
GTAGTGATGATGACAATGATGACACTTACCAAGAAACCAGCAATCAAAGA
ATGGGCAGTATGTTCCATTTGCACTAATGAAATTGAAGATTCGCCAGCTC
ATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGATTTGTTTAGAGATGTGG
ACAGAGAAAAGTATGAATTGCCCCACTTGTGCAACGAAGGCTGATACGAA
ATATATCGATTCTGAGTTATACGATGACATCATTGAAATATGGCATTACA
AATTTTCGGACGTTGTAAATATAGACTTGAAGGACAGATCTGATCTCTCA
ATAAGAAGATCTAATTTATACACCGACACACTAAGGAAAATTCCTAGAAT
CTTCAAGAAAGGACTGGTTCCTTTAAATGTGACATTCACTGACTGCAACT
GGGGCTATTGACACCACCTCCGATCTTGCATCTTCAGTCTTTCGACACAG
TTTGATAATAAGTGCTGTATCATCACATCCTAGACAGCCAACCACATCAT
CTGTCAATTCTGTGCAAACACCATCATTTGTCAATTCTGTGCAAACACCA
TCCCAGACAGCCAACCACAATAAGTGCTGTACCATCACGTACGGCCCATG
GAGATTGAAGATGGTCGAGTTGATGATGGTCAATTCGAAGATGATCAATT
CGAAGATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCAATTCGAAG
ATGGTCAAGTTGATGATGGTCAAGTTAGAAATGCGAGGCTCAACTTTTTT
AACAACATTAGAATGTCACAGGCTGAGCCCATACAACCAACCACATCATT
TATCAATTCTGTGCAAACTCCTCAGGCAGTAGTTCAACTTTGATAATATG
TCCTATTTGTCATTGTACTTCACCACCAAACACAGAATGTGTACGATGCG
TCCAAAATAGTGAGCTTGAAGAAAGTCTTGCTGCTGACCAANTGCATGAA
ATTTGCCGCCAGCAATTTAAAATAGCCAGTACCATTTCAACTTACTTGGC
TACCTATCATGGAAGGAAAATACAAGATTCATTCATTGACCTTGGAAGCT
ATTATGAAGAATATGTGAAAGAGAAGAAGAAAGCAATTAATTTGTACTTA
TATGTAGACACACCATACATGAAAATTGGGTTCAAGTGGGCATTAGAACA
AAACAAAAGTAGTGATGATGACAATGATGACACTTACCAAGAAACCAGCA
ATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAATTGAAGATTC
GCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGATTTGTTTAG
AGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGCAACGAAGGCT
GATACGAAATATATCGATTCTGAGTTATACGATGACATCATTGAAATATG
GCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAGGACAGATCTG
ATCTCTCAATAAGAAGATCTAATTTATACACCGACACACTAAGGAAAATT
CCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGACATTCACTGA
CTGCAACTGGGGCTATTGACACCACCTCCGATCTTGCATCTTCAGTCTTT
CGACACAGTTTGATAATAAGTGCTGTATCATCACATCCTAGACAGCCAAC
CACATCATCTGTCAATTCTGTGCAAACACCATCATTTGTCAATTCTGTGC
AAACACCATCCCAGACAGCCAACCACAATAAGTGCTGTACCATCACGTAC
GGCCCATGGAGATTGAAGATGGTCGAGTTGATGATGGTCAATTCGAAGAT
GATCAATTCGAAGATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCA
ATTCGAAGATGGTCAAGTTGATGATGGTCAAGTTAGAAATGCGAGGCTCA
ACTTTTTTAACAACATTAGAATGTCACAGGCTGAGCCCATACAACCAACC
ACATCATTTATCAATTCTGTGCAAACTCCTCAGGCAGTAGTTCAACTTTG
ATAATATGTCCTATTTGTCATTGTACTTCACCACCAAACACAGAATGTGT
ACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGTCTTGCTGCTGACCAAN
TGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTACCATTTCAACT
TACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCATTCATTGACCT
TGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAAGCAATTAATT
TGTACTTATATGTAGACACACCATACATGAAAATTGGGTTCAAGTGGGCA
TTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACACTTACCAAGA
AACCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTAATGAAATT
GAAGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTTCATCGGAT
TTGTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCACTTGTGCAA
CGAAGGCTGATACGAAATATATCGATTCTGAGTTATACGATGACATCATT
GAAATATGGCATTACAAATTTTCGGACGTTGTAAATATAGACTTGAAGGA
CAGATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGACACACTAA
GGAAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAAATGTGACA
TTCACTGACTGCAACTGGGGCTATTGACACCACCTCCGATCTTGCATCTT
CAGTCTTTCGACACAGTTTGATAATAAGTGCTGTATCATCACATCCTAGA
CAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCATCATTTGTCAA
TTCTGTGCAAACACCATCCCAGACAGCCAACCACAATAAGTGCTGTACCA
TCACGTACGGCCCATGGAGATTGAAGATGGTCGAGTTGATGATGGTCAAT
TCGAAGATGATCAATTCGAAGATGGTCAATTCGAAGATGGTCAAGTTGAT
GATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCAAGTTAGAAATGC
GAGGCTCAACTTTTTTAACAACATTAGAATGTCACAGGCTGAGCCCATAC
AACCAACCACATCATTTATCAATTCTGTGCAAACTCCTCAGGCAGTAGTT
CAACTTTGATAATATGTCCTATTTGTCATTGTACTTCACCACCAAACACA
GAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGTCTTGCTGC
TGACCAANTGCATGAAATTTGCCGCCAGCAATTTAAAATAGCCAGTACCA
TTTCAACTTACTTGGCTACCTATCATGGAAGGAAAATACAAGATTCATTC
ATTGACCTTGGAAGCTATTATGAAGAATATGTGAAAGAGAAGAAGAAAGC
AATTAATTTGTACTTATATGTAGACACACCATACATGAAAATTGGGTTCA
AGTGGGCATTAGAACAAAACAAAAGTAGTGATGATGACAATGATGACACT
TACCAAGAAACCAGCAATCAAAGAATGGGCAGTATGTTCCATTTGCACTA
ATGAAATTGAAGATTCGCCAGCTCATCTTCTTTCCTGCAAGTGCAGGTTT
CATCGGATTTGTTTAGAGATGTGGACAGAGAAAAGTATGAATTGCCCCAC
TTGTGCAACGAAGGCTGATACGAAATATATCGATTCTGAGTTATACGATG
ACATCATTGAAATATGGCATTACAAATTTTCGGACGTTGTAAATATAGAC
TTGAAGGACAGATCTGATCTCTCAATAAGAAGATCTAATTTATACACCGA
CACACTAAGGAAAATTCCTAGAATCTTCAAGAAAGGACTGGTTCCTTTAA
ATGTGACATTCACTGACTGCAACTGGGGCTATTGACACCACCTCCGATCT
TGCATCTTCAGTCTTTCGACACAGTTTGATAATAAGTGCTGTATCATCAC
ATCCTAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAACACCATCA
TTTGTCAATTCTGTGCAAACACCATCCCAGACAGCCAACCACAATAAGTG
CTGTACCATCACGTACGGCCCATGGAGATTGAAGATGGTCGAGTTGATGA
TGGTCAATTCGAAGATGATCAATTCGAAGATGGTCAATTCGAAGATGGTC
AAGTTGATGATGGTCAATTCGAAGATGGTCAAGTTGATGATGGTCAAGTT
AGAAATGCGAGGCTCAACTTTTTTAACAACATTAGAATGTCACAGGCTGA
GCCCATACAACCAACCACATCATTTATCAATTCTGTGCAAACTCCTCAGG
CAGTAGTTCAACTTTGATAATATGTCCTATTTGTCATTGTACTTCACCAC
CAAACACAGAATGTGTACGATGCGTCCAAAATAGTGAGCTTGAAGAAAGT
CTTGCTGCTGACCAANTGCATGAAATTTGCCGCCAGCAATTTAAAATAGC
CAGTACCATTTCAACTTACTTGGCTACCTATCATGGAAGGAAAATACAAG
ATTCATTCATTGACCTTGGAAGCTATTATGAAGAATATGTGAAAGAGAAG
AAGAAAGCAATTAATTTGTACTTATATGTAGACACACCATACATGAAAAT
TGGGTTCAAGTGGGCATTAGAACAAAACAAAAGTAGTGATGATGACAATG
ATGACACTTACCAAGAAACCAGCAATCAAAGAATGGGCAGTATGTTCCAT
TTGCACTAATGAAATTGAAGATTCGCCAGCTCATCTTCTTTCCTGCAAGT
GCAGGTTTCATCGGATTTGTTTAGAGATGTGGACAGAGAAAAGTATGAAT
TGCCCCACTTGTGCAACGAAGGCTGATACGAAATATATCGATTCTGAGTT
ATACGATGACATCATTGAAATATGGCATTACAAATTTTCGGACGTTGTAA
ATATAGACTTGAAGGACAGATCTGATCTCTCAATAAGAAGATCTAATTTA
TACACCGACACACTAAGGAAAATTCCTAGAATCTTCAAGAAAGGACTGGT
TCCTTTAAATGTGACATTCACTGACTGCAACTGGGGCTATTGACACCACC
TCCGATCTTGCATCTTCAGTCTTTCGACACAGTTTGATAATAAGTGCTGT
ATCATCACATCCTAGACAGCCAACCACATCATCTGTCAATTCTGTGCAAA
CACCATCATTTGTCAATTCTGTGCAAACACCATCCCAGACAGCCAACCAC
AATAAGTGCTGTACCATCACGTACGGCCCATGGAGATTGAAGATGGTCGA
GTTGATGATGGTCAATTCGAAGATGATCAATTCGAAGATGGTCAATTCGA
AGATGGTCAAGTTGATGATGGTCAATTCGAAGATGGTCAAGTTGATGATG
GTCAAGTTAGAAATGCGAGGCTCAACTTTTTTAACAACATTAGAATGTCA
CAGGCTGAGCCCATACAACCAACCACATCATTTATCAATTCTGTGCAAAC
TCCTCAGGCAGTAGTTCAACTTTGATAATATGTCCTATTTGTCATTGTAC
TTCACCACCAAACACAGAATGTGTACGATGCGTCCAAAATAGTGAGCTTG
AAGAAAGTCTTGCTGCTGACCAANTGCATGAAATTTGCCGCCAGCAATTT
AAAATAGCCAGTACCATTTCAACTTACTTGGCTACCTATCATGGAAGGAA
AATACAAGATTCATTCATTGACCTTGGAAGCTATTATGAAGAATATGTGA
AAGAGAAGAAGAAAGCAATTAATTTGTACTTATATGTAGACACACCATAC
ATGAAAATTGGGTTCAAGTGGGCATTAGAACAAAACAAAAGTAGTGATGA
TGACAATGATGACACTTACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009503XLOC_009503Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016977-proteinTCONS_00016977-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016977-exon-sc0000255-1575043694:351663..351911TCONS_00016977-exon-sc0000255-1575043694:351663..351911Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:351306..351425TCONS_00016977-exon-sc0000255-1575043694:351306..351425Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:350600..350832TCONS_00016977-exon-sc0000255-1575043694:350600..350832Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:350455..350474TCONS_00016977-exon-sc0000255-1575043694:350455..350474Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:349982..350000TCONS_00016977-exon-sc0000255-1575043694:349982..350000Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:349737..349763TCONS_00016977-exon-sc0000255-1575043694:349737..349763Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:349519..349584TCONS_00016977-exon-sc0000255-1575043694:349519..349584Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:348162..348224TCONS_00016977-exon-sc0000255-1575043694:348162..348224Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1575043694:347556..347916TCONS_00016977-exon-sc0000255-1575043694:347556..347916Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:351663..351911TCONS_00016977-exon-sc0000255-1510915933:351663..351911Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:351306..351425TCONS_00016977-exon-sc0000255-1510915933:351306..351425Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:350600..350832TCONS_00016977-exon-sc0000255-1510915933:350600..350832Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:350455..350474TCONS_00016977-exon-sc0000255-1510915933:350455..350474Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:349982..350000TCONS_00016977-exon-sc0000255-1510915933:349982..350000Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:349737..349763TCONS_00016977-exon-sc0000255-1510915933:349737..349763Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:349519..349584TCONS_00016977-exon-sc0000255-1510915933:349519..349584Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:348162..348224TCONS_00016977-exon-sc0000255-1510915933:348162..348224Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1510915933:347556..347916TCONS_00016977-exon-sc0000255-1510915933:347556..347916Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:351663..351911TCONS_00016977-exon-sc0000255-1491911889:351663..351911Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:351306..351425TCONS_00016977-exon-sc0000255-1491911889:351306..351425Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:350600..350832TCONS_00016977-exon-sc0000255-1491911889:350600..350832Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:350455..350474TCONS_00016977-exon-sc0000255-1491911889:350455..350474Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:349982..350000TCONS_00016977-exon-sc0000255-1491911889:349982..350000Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:349737..349763TCONS_00016977-exon-sc0000255-1491911889:349737..349763Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:349519..349584TCONS_00016977-exon-sc0000255-1491911889:349519..349584Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:348162..348224TCONS_00016977-exon-sc0000255-1491911889:348162..348224Clytia hemisphaericaexon
TCONS_00016977-exon-sc0000255-1491911889:347556..347916TCONS_00016977-exon-sc0000255-1491911889:347556..347916Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:347556..351911 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23981	0.372657	0.106534	0.100769	0.914513	1.63643	2.55143e-05	1.34986	0.536214	0.836196	0.283475	1.20136	1.73172	0.985699	0.206764	0.392691	0.110167	0.523202	0.778469	1.02928	0.802398	0.957826	0.649517	0.449722	1.78974	2.39825	2.14705	2.86952	0.0799952	0.0951199
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016977 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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