XLOC_009670 (gene) - C. hemisphaerica

Overview
NameXLOC_009670
Unique NameXLOC_009670
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000264:216792..227455+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009670 ID=XLOC_009670|Name=XLOC_009670|organism=Clytia hemisphaerica|type=gene|length=10664bp|location=Sequence derived from alignment at sc0000264:216792..227455+ (Clytia hemisphaerica)
tgggggtcactagtggccgcctatagcagtgcctatagaccaagagtaag gcctaaaagcctggatctgtctattgtgtagactaataACCACTTTGATT CCTAATCTGATAGGCTTTTAAAACTGAATGAATGTTACGTATATTTTAAT tctagaaaaatgaaatttaaaaaatacacaaaaatctaaaacaatATCAT GCATCAAATATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTCATC TGAGAAAACTGATGGGGGATCAATTGACATCAACAAAGGAGATTCAACTT CTGGCGATCAAAGAATTACAAAGGAAGATGACAgtgaaattaaagaaaaa tgcgAATACTGTGGGTCGGCagaaaataaacttttcagGTAAGTTTATAA AATGTCTAGCTTATTAAATTTCTTGATACACGCTTTGTTTCGTAAGAACC AGTATAACTCAACTCTTCTTGTTTGTTCATAGGTTTTGGCCttgtgtttt taaaattgttcttaaattaattgttaaagttttgataaatcgTGCCATTT TGAGCATTCTTTTCTTTTGCTAACATTGTATGTTGAATGtagggcaagct tactcatggccacacctgatgccagactttggtcttcatctacccgcttt ccatttatttctcaactttctttaaattcacttaccggttttctctccgc taaatttgtagatttatattgattgtttgtctattgtaagattgttNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNttaagttggtgaaaatgatttctc gctctgtttgaatgtttttgatttttagtttgacacgcgttttctgaatt ttaattagctttttcagatataaACAAGTTTTTTAAAGCACTTTTTATAA TACAATTTTAATTATATATAGAAATAGTATTATATTTCAAGTGTTCGAAG AAAGCTCATAGAACTATCAGGGAcctaatttcaatttcaaggaggttaaa atttattttaaaattgctGATATGAAAACGGCTTCCTTAAATTAATTCCT TACCCTTCCAGGCTCTTCAGGATTCCCTACTCCTCTACTCTAAAAGTCCC CTTAAAACGCTATCTACCTTTTCATTCCATAAGCTATTTTGCTATCCTTA gaatcttttgaaagaattaaTCACTTGAGGGTGATAATAAGACCTGCTAC CATTTCTTTGAGTTCCAAGATTGCAAAGGTGGGAAAGAAGAAACCATCAA TACAACAACCTCCTTATTTGTTATTTAGATGTGCAAGGTGCAAACTTGTC TACTATTGTAACCGAAACCATCAGAAATTACATTGGCAACTCCATAAACC AGAATGCAGTATCACCATAACCCCTGGTACATCATCTACACCAAGAGATT CTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAGTGTCATTCGACAG ACAGCTAATATCCATTCCACAGATATGAACAATCCACGTGCCCACATGAT TCCTTTGTACGCTGTTCGTGATTACGATATGGACGTGGATGACTACACAA TAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGATGGTTTTGAAGAT CGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTAAACAGATGCATGA TGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAAACCAAATCTGCCA AAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGGCATCATGAAACCT GGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaagaaaaggtCAGAGG AGATGTCATCACTTGGATCACTGGACAGGAAGAGACTTATGAGAATATGC CTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTATTGTAATGGAAGA CTGGGTAATATCAAAGGAAGGACACCGGTGAGTTGAGGCATTTTAATATG AATCCTTATAACTGGAATGGTTCCTTAAattgaacaagttttatggttcc TACAATTAACAATACCTTGcttaaaccttactccataacgcGGCGAAATT TTCTAAACTTGAACAAATTTTGTATTCCCCGTAcatgttcgaattatgga gactccactgtatttgtTGTGTCAATGTTCTCTTAACgataatttcattt tgattctgCCCCTCCAAGTACTACTATCACGATATTTATTTTTACCCAAA GCGTCCATATATATTATTCACATGCAGTTTATTAAGAATCGTATCATGCT TCAATATTACACCCTTATAAGgaaatcttttttccaaaaggTGCAGTATT TTCATCGAACTATTCTTCATGGAATATAATATTTATTCTTCAAGTGTTCC CAGTGTATGTAATACTGTTTTTTAGGCAATGGTAGCGACGTACCCAGGAG ATGGCACAGGTTATAAGCGTCATATTGATAACACTTTGAAAGACGGCCGT GCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTGGCAGTCGGAGGTGAG TCAAAAGAGAAATGCTGAACACTTTTGAtgggcttttctagaaaaaaacc gtataccccctgttgagcaggtccatccctctgtgggtggaaatgctgta accccctggaattccaggcaatttcaggtttaaacccctctggaattttg aattttattaggatttaaaaagctacccccatggaaCTCAAGTTATTCTT GACAGATTtgtgtatctccctatggaattctgCCACATAACCTCTTTGGA ATGGAAATGAACCTCCTCATCAACAGGGGGTATAtggtttttctggaaaa gcccaatttatGAGATGTTTATTAGTCTAATCGCACGacgagttattttt tctcatttggcgccccttcaaagagagcaattaatcgttaattgcatcct gtagagagcaattaatcgttaatcacactcttcaatgacNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNact cgtacaattcgaaaattgcactcgtgatttttttgtttcgaattttcctc gtcctttcggactcggaaaattaataacaaaaaaatcactcgtgcaatta atCTCGAATTGGActagttatcatgtgattacatatactaatcgtATGAT GAAATTTTTCCGATGCTATTGCTCTAAGCCCAAACAGTGATATTATTTCC ACATCAAGGAGTTGAGCAAGTTTAGAACTAATTTCCCTTTTACATTCTAA AGTGTAAATGAATTTGATTACACTTCGGTATGCCCTCGTGAAATATCCTA AATTGCCCTCCTTCCTATACGATTATTGATACGATTAGCCTGAGATATAG TCAAACCTTTCAGGATACATATTCAACAAAACTTAACAGCGCAATCTAGT TTGTTTTAGTATAAATACCATGAGTCTCAaattgcaaaagaaaaaaacat ttgaaaattaatttggtTGGTTCAGAGGTGTAATGAATAAGATgtgttgt ttgttttttaaactCGTGTTTTCTAAGCGACCAttccatcttttaacaat aagctCAACGAGATAAACCCAATAACTACTATCATGGATATAAATTTTGA GACAAAATAAAATTATCATCTAATCCCCCCCTCCCCCCATTCGCAATGTT CAATGAACGGTTGGATAGTTGTGCACACTGAACCTTGCAAATGGGGAAAG GGCGGGGGGGTTGGCACTGACATTGGCGGCtaacggggacgtgccgctag AGTTTGAAAAGaccttgaaaattagtaaattttggtccctgtcagatatc ttcagaggataaaaaaagggaccctgaccagcagtACCTCCCCGTTTCCA ATTTCGCATGAGTGAGACCCCCGGGGGGAAGGGGGTCTGTTTCTACATAT TTACTGCAAATTCCtgtgtttttctcaaacattttaGTCGATGATTATAA ACTGCGAAAAAATGTCGCACTATTAATATTCATTAtctatctgttttttt ttggctTCATTTTTTCAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTT CGCATCGAAAGAGAGTGTAGATATTGATCCAGTGTACGATAGGCTGGCTG TTTTCTGGTCTGATCGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCAT CAAAGGTACATGcataaattattaaaaaatatttgcgTCTATTTCCCAAA TGAACTACActtgagtctctttaactcaaaaTTCATTTAGAAATACCTTA TAAACATTACTCCAAACTAGAAATTTCCTTACCTTGGACTAATTTGTGTT TCCCGTGAGGgatcgagttatggagactccactataTCTTAAGGGATAAT GACTTACTCATCTTTATCCACCAAGTAAGTCTTTTCTGGATGTATTCTTT GCCTTTTAGACTAGACTTCAAAAGTGATAAGATTAAAAATTCCCAGTTAC CTTATTATatccattaatttttgcacttttgCTTCGGCTATCAAATTTGT TATGAATTATACATCTTCttaaatcaaaatcttcttgCGATTACCAGGTT TGCGGTGACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGG AACAATATTTCTCTACGCGTAAGTCACAACAAtttgaaaatctgaaattt aTACCGATTTTTAGGGAGAACATTCCATATGGGACTTGATTTTTATAATG CATTGTTTCATGATTTACTATTTCAAAACAATCCTTGCAATAGCgaatta ctttaggcgtacaaacttttgcgagcagaaagttttcgcgatttttgcga attttagcCCTATTTGCGGAAGTAACAAAACACTATTTTTATGCACCCAA AACTTGAACTTTCTACTAAAATTATACctcattcgcgaaaattaagttTC TACTCGCGAAAGTTAGTACATCTAAAGTAGCATTAAAAGATGTGGCAGTT ATTTATTGCGTAAAGCACTTTTGAAGGTcgatattttattttcaactttc gTGTAACGTTGAAGAACAAACATGTTTTGGCGGTAATTTTCTGTTGGTTA GTACATTGgaaactctataactcgaatgtctcctttaGTGAatcaagttt tatggtccctttaTTTAGAaataccttataaacctttactcgataactcg aaaattccttaactcgaacaattttgTGTTCCCAGtgcgggttcgagtta tggagactccgctGTATTTACTTGGCTTGACataaactctttttttattt gcaGTGAAAAACGCTTTTGCCAAAGGAGTATCTGTAAGTAcatgtttagt ttttttcaaaccCCTTCTCACCtatctgtaccagagtgtatctcacgttt atcgcttcgtagtacactctgtgtgcatcgtttgtttgataaaaaaattc ccgtacggagacttCTGCGATGAATTATGATTTAtgaatagcaacacttc tctcatcgtctcccttctctcaccaacactccatcgcagcggtcggtttg aaaaatatcaaataagaaaagacaatgacaacagaccctttACGgcgatg aattttgaaattggccgtagatactgggtcagacaatcttctcacagacc cagtacggtaggatttttttcagacagtggggataaaaataacggactga aacttgatggggattgatatccAATATCCTTTTATGGcttgggatttcaa ttcttttattttcaagtcaaaaatacAGTTGAGATAGTAAATATtgtgca gtgaggattggtttatttgattattttcagtggggacaaaaattgcagaa taattttccaccgggggaAGGGTCTGTGAATGGGTCAGTGAGGAGGAGgt gttttttggattttgtttgtttgtactTTCAAAATGTGTATATGAATGAC AATCCTCCAATCAGGAGAGAGAGTTATTCTCAGATGCATTGTAAATCATC ATTCTCAACATTGGTCAAAGCAAACTCTATGATTTGGAGCTTTGTTGTTG ATGCTCTAAGCCGATTAAACACAATCTCTCCCGTCAAGGATGACAAAGAA GTACAAAGCGCCAATCTGGTAGATTAAGAGCATCCACTGCCAGTTGCTCT CATCATATTACCAAACCCACGCCTCGAAGAAGAACAAAGATCtagtcaaa ataaaagaagaacttagaACATCTGACAGTTCACCATTACATAAAAACTT TCTCATTGACAACAAACTATTTCGAATCAACCCTGCTGAAGTTGAACAAG AAGAAGACAGTTTTGCATACAAAGACAGTTTTGCATACAAAGACACAAAC ATAACTAAGTAATTCCTGAATTTCATAATCCAAATCATATGAAACATATA GGAATCAACGTAACTCTCAAGAAACTGCAACAACGTTATTACTGACGTTC GATGGCCAAGCATGTTGTACGTCTCATAAACCATTGTTTGACATGTTGCC AGGTTAAGGGCAGAACGACAAAAGCACCAGTTTATATAATTTCCTTTATG GACGGATATACCGCCTGGACTGAAGCTTTTCCCAACCAAATTGATCGAGA CTGCGGAAGTCGCGTTACGGGACTCAAAGACAATAACAACTGGGGTGTAA TTTTACCAGGAGTCTTGTTCGCGTACATGACTACCGTCGTGAGGACAAGA AAATTGTCACCTTTCCAGCTCTTATTTGGAAGATTGCCTGTACTTCCACC TGATGTTGATAATACACCTATCGAGATATTAACCACTAATACTGATGATC ATTTGAAGAGGGTTTCAGCCAGCTTATCTCACGCCAAGGGGACTGCCACA CAACACATGAACAGGTGCCAAGTGAAGGTGGAGCATGACAATGAAAGAAA GAACTTCGAGCAGTACACGCTTTACTCTTATGTCTGGCTCACGTCTTACA TAAGGAAGAAAAGAAGATCACTAATCATTGAGCTGATTGATCCCACCGGT TAGTTATCGATTAAAAACACCAAATGGGTTGATCCTGACGAATCTTGTTT ACCATGATCGACTAAAGAGGCATGCCGGTGAAGCTCCAGAAACAACGCCG ACAATACCAAGTAAACTGATAGCAGAAGAAACGTGGGAGGAGGAAGATGA TGTACCGTTAAAtgaactaaaaaagaaaaaaagagactCCAGTAGGAAAA GGAGGACAATCTTACGCTCGCTGAgctaaaacaaaaattgaagaaatatt AATcggaattattttctttttcagactATAACAatgaaaaactttatata tttatcAATAACCGTATCAATATGGTATCCAGCTTCGACTCAGACACTGA AAGAAACTTGCCATACTGttgaaaaattgagtaattgcCAAACTATAATC CCTCTTGGCTATTACACATTAccgaaaataaaagaatatactGACAAGGC ACTAAACAGGATAGACTCAATTTCAAAGGCAAGGTTGTAAGATATACCTA CTGTGACGTCCTTTGGAAATGTAGACTAGTTTACGTCCGAACTGAATGCT CTGTATGGGAAGAAACCACTATCAAAACCTTGTTCCCTACCGTTACTAAA AATGAATTTCACGGTATGGTTAAACTCGAGAGAACAACGGAATAATAAAG AAACGCAAATTCGGACGTAACTACTAAAAAAGCACCCCAAGAAAACCTGC ACCATGCCATATCATTACCAAAGCAAGAACACACTATGCAGCCCGTTGCG AAATTTAAGAATACACCGTCGAGTTTATTGGTAATTCATATATTAACCTT AAACGACATGTTTTACCAAGACTTCCCATACCAGTTAAACAAcaatcata aattttatatactatgttaaatttaatttcaaagaatataattttttaac gaATGTGTtatcatttgcttacacagcctttttaaagattttatttttac ataagtgtttccgtttcatatcagacacatattttatatcaggacagtgt ctccctattgttatattatgctgacataagcaaagaaatgtttttctttt cctctttccgACATCCGTATTATTTCAATGTGAAGAagcttgtgaatcaa aattgacgagtaagcaaaagcttttttcacatgtacgtaaaattttactt atgACCTTGAAGGGCGGGAAGTCCCCTAAGCTTACGTATAGTGTTTTAAA GCCCTTATGTAGAGTTTGCTTtatgttcaaaaagttttgaacggaaggaa aagtcacgtaagaccctcttaatcaacaaaaactctacataatgtcgggg aaattcccaaaagacagccttacaAACGATTTCCGcctttttcacatgca cgtaaaattttacttatgACCTTGAAGGGCGGGAAGTCCCCTAAGCTTAC GTATAGTGTTTTAAAGCCCTTATGTAGAGTTTGCTTTATGtgcaaaaagt tttgaacggaaggaaaagtcacgtaagaccctcttaatcaacaaaaactc tacataatgtcggggaaattcccaaaagacagccttacaAACGATTTCCG cctttttcacatgcacgtaaagttttactttagaccttacggAAAATCGT AATCGAGCTTGGTACTAAAATTAAGCTAAGAATAACTGGTGCCTGTTTCC TAAAGATTAGCACGGAATTGCAAGTAAACCCAGCTGTAAACCGAAACccg tttacacgttttttttataagaacatccaaaatttttgaacccttagatg ttcttaactttttgagttttaagcctaaaaatgttcttaatatgttctta ttttcaccatttttatttttttgtccattttcctaagaaattgggtgttt tagagtcttatgttcttgtatagtttcttataaaaaaacgtgtattcttt tTTGTTCAGGTCGATTCGGATGAGCCGCAAAGTAAAAATGTGACTACTTC ATCGTCAGCAACAAGTCAAAAAGCTCAACATCCATCATCCagcaataaca ataaaactCTCTCTGAAAGAAATAATGACTATGACGAAAATGTGAAATAT GGACGAGTTCCTACTGACTCAACAAGCTGACATCTATTCTGTTAATGTTT CATTGATTATCGATTGCTTGTGGAGAAATATCACAGTTGAAATGTTCAGT CGAATGAGATTACATTTACACATGCTGAATACAGAATCTGAAGACCACTT CTGAGCTTCAAAATCCTCACTGGGCATTGATCTACAAGTCCATTCCTAGC ACTTCACATATGAAAATGACAGCTAAACTTGAATATTACCCCTTATGATG TTTTTGGTACAGAGGTTGAAAAAAGACGTATATTATCTCAATAAGGTatt aagggctacatacactacacaatatattgatgaaCAATATctgacaatat ggtttgcggaccgtaatgtactaAGTAAATAGTAgatattttattataaa aaggaattttctttttgtaaacaatcaccctttattgttggaatattgca aatagagctgacaatatattgcggaaaccttttcaatatattgccagtat tcagcaatatattatcaatatattggctgacaatatattgcgtaGTGTAT GTAGTCCTTTATGTTTACTGATAACGAGTTTACCGCGAACTAGTGCGGTT CATACAAGACCATGTTGAGAGGTTACACCTCTTTTGACTTATGTTCGGAC GGGCACATCATTTCAGCTTTCTCATAGACGATGCTATCATCGTCCGTCAG AGGAGAGGGATAGTAAACGCGGGTAATATGCCCAGAGTTTACAGCCATCA CGGCGATTTACGAGAAAAATAGTGGCGGTAGGTTTTTGCCCCCTTTCGCA AAACCTAGTTGTAACTGTAAAGTGTTAAGCTTCGTTAACATGAAGGGCTC ATTGTTTTGTTATGTTTTATGAGATTTGAAATTTAGCATCGATTTAAATT TAGCATCGATttaaattttgtatttatttgcATTAGTTGTTAGTTCGGGA ACACTTTCCTTGTCCTTGTAGAGATTGAGAACAAGTTTGTTGTTAGAGGC TTCAACATACTAGCATGTGGGACCTAAAATATTAATTCAGAGAGGTTGCA CTGTGAAATTTAATTATATAGGTAGtggaataaaaacaattttcattttt taagaattttaaaatactttttttatttcgtacacaaattgtaaatatta taaaaccaaagatttattatagaAACTGCATATACTGCTGATTGATTTTC GCTGTTTTCTCGTGTTCTAGCCAATGAGTAAAATCCCAGCCGAAGTCAGG AAAATACAACGTAACACTTAGCACATGCTTAAAAATTCGCCATATCTGAg actagatatgcttataagtgcaatgcttataaaaacatgtagcTGAATGC TGCACAACGTTGTTTGTGAGAAAAATCCACCTTGCCTCAACGTACCACCA AAAGATTGTTTAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017281TCONS_00017281Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017281-proteinTCONS_00017281-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:216792..227455 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EGLN1egl nine homolog 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.94 6.82 3.09 2.28 18.26 14.5 17.42 18.49 14.27 15.95 13.51 10.79 11.71 11.42 16.7 16.22 18.96 18.01 10.95 14.25 16.47 16.78 19.23 19.31 8.05 9.7 10.75 8.61 18.79 19.05