TCONS_00017281 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00017281
Unique Name	TCONS_00017281
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2949

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000264:216792..227455+
coding sequence from alignment at sc0000264:216792..227455+

transcript sequence

>TCONS_00017281 ID=TCONS_00017281|Name=TCONS_00017281|organism=Clytia hemisphaerica|type=transcript|length=2949bp
tgggggtcactagtggccgcctatagcagtgcctatagaccaagagtaag
gcctaaaagcctggatctgtctattgtgtagactaataACCACTTTGATT
CCTAATCTGATAGGCTTTTAAAACTGAATGAATGTTACGTATATTTTAAT
tctagaaaaatgaaatttaaaaaatacacaaaaatctaaaacaatATCAT
GCATCAAATATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTCATC
TGAGAAAACTGATGGGGGATCAATTGACATCAACAAAGGAGATTCAACTT
CTGGCGATCAAAGAATTACAAAGGAAGATGACAgtgaaattaaagaaaaa
tgcgAATACTGTGGGTCGGCagaaaataaacttttcagATGTGCAAGGTG
CAAACTTGTCTACTATTGTAACCGAAACCATCAGAAATTACATTGGCAAC
TCCATAAACCAGAATGCAGTATCACCATAACCCCTGGTACATCATCTACA
CCAAGAGATTCTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAGTGT
CATTCGACAGACAGCTAATATCCATTCCACAGATATGAACAATCCACGTG
CCCACATGATTCCTTTGTACGCTGTTCGTGATTACGATATGGACGTGGAT
GACTACACAATAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGATGG
TTTTGAAGATCGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTAAAC
AGATGCATGATGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAAACC
AAATCTGCCAAAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGGCAT
CATGAAACCTGGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaagaaa
aggtCAGAGGAGATGTCATCACTTGGATCACTGGACAGGAAGAGACTTAT
GAGAATATGCCTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTATTG
TAATGGAAGACTGGGTAATATCAAAGGAAGGACACCGGCAATGGTAGCGA
CGTACCCAGGAGATGGCACAGGTTATAAGCGTCATATTGATAACACTTTG
AAAGACGGCCGTGCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTGGCA
GTCGGAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTTCGCATCGAAAG
AGAGTGTAGATATTGATCCAGTGTACGATAGGCTGGCTGTTTTCTGGTCT
GATCGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCATCAAAGGTTTGC
GGTGACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGGAAC
AATATTTCTCTACGCTGAAAAACGCTTTTGCCAAAGGAGTATCTGTCGAT
TCGGATGAGCCGCAAAGTAAAAATGTGACTACTTCATCGTCAGCAACAAG
TCAAAAAGCTCAACATCCATCATCCagcaataacaataaaactCTCTCTG
AAAGAAATAATGACTATGACGAAAATGTGAAATATGGACGAGTTCCTACT
GACTCAACAAGCTGACATCTATTCTGTTAATGTTTCATTGATTATCGATT
GCTTGTGGAGAAATATCACAGTTGAAATGTTCAGTCGAATGAGATTACAT
TTACACATGCTGAATACAGAATCTGAAGACCACTTCTGAGCTTCAAAATC
CTCACTGGGCATTGATCTACAAGTCCATTCCTAGCACTTCACATATGAAA
ATGACAGCTAAACTTGAATATTACCCCTTATGATGTTTTTGGTACAGAGG
TTGAAAAAAGACGTATATTATCTCAATAAGGTattaagggctacatacac
tacacaatatattgatgaaCAATATctgacaatatggtttgcggaccgta
atgtactaAGTAAATAGTAgatattttattataaaaaggaattttctttt
tgtaaacaatcaccctttattgttggaatattgcaaatagagctgacaat
atattgcggaaaccttttcaatatattgccagtattcagcaatatattat
caatatattggctgacaatatattgcgtaGTGTATGTAGTCCTTTATGTT
TACTGATAACGAGTTTACCGCGAACTAGTGCGGTTCATACAAGACCATGT
TGAGAGGTTACACCTCTTTTGACTTATGTTCGGACGGGCACATCATTTCA
GCTTTCTCATAGACGATGCTATCATCGTCCGTCAGAGGAGAGGGATAGTA
AACGCGGGTAATATGCCCAGAGTTTACAGCCATCACGGCGATTTACGAGA
AAAATAGTGGCGGTAGGTTTTTGCCCCCTTTCGCAAAACCTAGTTGTAAC
TGTAAAGTGTTAAGCTTCGTTAACATGAAGGGCTCATTGTTTTGTTATGT
TTTATGAGATTTGAAATTTAGCATCGATTTAAATTTAGCATCGATttaaa
ttttgtatttatttgcATTAGTTGTTAGTTCGGGAACACTTTCCTTGTCC
TTGTAGAGATTGAGAACAAGTTTGTTGTTAGAGGCTTCAACATACTAGCA
TGTGGGACCTAAAATATTAATTCAGAGAGGTTGCACTGTGAAATTTAATT
ATATAGGTAGtggaataaaaacaattttcattttttaagaattttaaaat
actttttttatttcgtacacaaattgtaaatattataaaaccaaagattt
attatagaAACTGCATATACTGCTGATTGATTTTCGCTGTTTTCTCGTGT
TCTAGCCAATGAGTAAAATCCCAGCCGAAGTCAGGAAAATACAACGTAAC
ACTTAGCACATGCTTAAAAATTCGCCATATCTGAgactagatatgcttat
aagtgcaatgcttataaaaacatgtagcTGAATGCTGCACAACGTTGTTT
GTGAGAAAAATCCACCTTGCCTCAACGTACCACCAAAAGATTGTTTAGA

Run BLAST on NCBI

protein sequence of TCONS_00017281-protein

>TCONS_00017281-protein ID=TCONS_00017281-protein|Name=TCONS_00017281-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MDSSGGTSKVNVSSEKTDGGSIDINKGDSTSGDQRITKEDDSEIKEKCEY
CGSAENKLFRCARCKLVYYCNRNHQKLHWQLHKPECSITITPGTSSTPRD
STGGGGMTSKPVSVIRQTANIHSTDMNNPRAHMIPLYAVRDYDMDVDDYT
ITSSPAISKLSQDGFEDREVVQKFADYLVKQMHDEGYCIIDDFLGETKSA
KVLWDAVTLLQSGIMKPGQVIKKNEIKGKEKVRGDVITWITGQEETYENM
PLIMNRVDRLIRYCNGRLGNIKGRTPAMVATYPGDGTGYKRHIDNTLKDG
RALSVLYYLNKGWQSEAYGGQLRLFPFASKESVDIDPVYDRLAVFWSDRR
TPHEVLPAFHQRFAVTLWYFDAAEREQVKEQYFSTLKNAFAKGVSVDSDE
PQSKNVTTSSSATSQKAQHPSSSNNNKTLSERNNDYDENVKYGRVPTDST
S

Run BLAST on NCBI

transcript from alignment at sc0000264:216792..227455+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00017281 ID=TCONS_00017281|Name=TCONS_00017281|organism=Clytia hemisphaerica|type=transcript|length=10664bp|location=Sequence derived from alignment at sc0000264:216792..227455+ (Clytia hemisphaerica)
tgggggtcactagtggccgcctatagcagtgcctatagaccaagagtaag
gcctaaaagcctggatctgtctattgtgtagactaataACCACTTTGATT
CCTAATCTGATAGGCTTTTAAAACTGAATGAATGTTACGTATATTTTAAT
tctagaaaaatgaaatttaaaaaatacacaaaaatctaaaacaatATCAT
GCATCAAATATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTCATC
TGAGAAAACTGATGGGGGATCAATTGACATCAACAAAGGAGATTCAACTT
CTGGCGATCAAAGAATTACAAAGGAAGATGACAgtgaaattaaagaaaaa
tgcgAATACTGTGGGTCGGCagaaaataaacttttcagGTAAGTTTATAA
AATGTCTAGCTTATTAAATTTCTTGATACACGCTTTGTTTCGTAAGAACC
AGTATAACTCAACTCTTCTTGTTTGTTCATAGGTTTTGGCCttgtgtttt
taaaattgttcttaaattaattgttaaagttttgataaatcgTGCCATTT
TGAGCATTCTTTTCTTTTGCTAACATTGTATGTTGAATGtagggcaagct
tactcatggccacacctgatgccagactttggtcttcatctacccgcttt
ccatttatttctcaactttctttaaattcacttaccggttttctctccgc
taaatttgtagatttatattgattgtttgtctattgtaagattgttNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNttaagttggtgaaaatgatttctc
gctctgtttgaatgtttttgatttttagtttgacacgcgttttctgaatt
ttaattagctttttcagatataaACAAGTTTTTTAAAGCACTTTTTATAA
TACAATTTTAATTATATATAGAAATAGTATTATATTTCAAGTGTTCGAAG
AAAGCTCATAGAACTATCAGGGAcctaatttcaatttcaaggaggttaaa
atttattttaaaattgctGATATGAAAACGGCTTCCTTAAATTAATTCCT
TACCCTTCCAGGCTCTTCAGGATTCCCTACTCCTCTACTCTAAAAGTCCC
CTTAAAACGCTATCTACCTTTTCATTCCATAAGCTATTTTGCTATCCTTA
gaatcttttgaaagaattaaTCACTTGAGGGTGATAATAAGACCTGCTAC
CATTTCTTTGAGTTCCAAGATTGCAAAGGTGGGAAAGAAGAAACCATCAA
TACAACAACCTCCTTATTTGTTATTTAGATGTGCAAGGTGCAAACTTGTC
TACTATTGTAACCGAAACCATCAGAAATTACATTGGCAACTCCATAAACC
AGAATGCAGTATCACCATAACCCCTGGTACATCATCTACACCAAGAGATT
CTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAGTGTCATTCGACAG
ACAGCTAATATCCATTCCACAGATATGAACAATCCACGTGCCCACATGAT
TCCTTTGTACGCTGTTCGTGATTACGATATGGACGTGGATGACTACACAA
TAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGATGGTTTTGAAGAT
CGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTAAACAGATGCATGA
TGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAAACCAAATCTGCCA
AAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGGCATCATGAAACCT
GGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaagaaaaggtCAGAGG
AGATGTCATCACTTGGATCACTGGACAGGAAGAGACTTATGAGAATATGC
CTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTATTGTAATGGAAGA
CTGGGTAATATCAAAGGAAGGACACCGGTGAGTTGAGGCATTTTAATATG
AATCCTTATAACTGGAATGGTTCCTTAAattgaacaagttttatggttcc
TACAATTAACAATACCTTGcttaaaccttactccataacgcGGCGAAATT
TTCTAAACTTGAACAAATTTTGTATTCCCCGTAcatgttcgaattatgga
gactccactgtatttgtTGTGTCAATGTTCTCTTAACgataatttcattt
tgattctgCCCCTCCAAGTACTACTATCACGATATTTATTTTTACCCAAA
GCGTCCATATATATTATTCACATGCAGTTTATTAAGAATCGTATCATGCT
TCAATATTACACCCTTATAAGgaaatcttttttccaaaaggTGCAGTATT
TTCATCGAACTATTCTTCATGGAATATAATATTTATTCTTCAAGTGTTCC
CAGTGTATGTAATACTGTTTTTTAGGCAATGGTAGCGACGTACCCAGGAG
ATGGCACAGGTTATAAGCGTCATATTGATAACACTTTGAAAGACGGCCGT
GCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTGGCAGTCGGAGGTGAG
TCAAAAGAGAAATGCTGAACACTTTTGAtgggcttttctagaaaaaaacc
gtataccccctgttgagcaggtccatccctctgtgggtggaaatgctgta
accccctggaattccaggcaatttcaggtttaaacccctctggaattttg
aattttattaggatttaaaaagctacccccatggaaCTCAAGTTATTCTT
GACAGATTtgtgtatctccctatggaattctgCCACATAACCTCTTTGGA
ATGGAAATGAACCTCCTCATCAACAGGGGGTATAtggtttttctggaaaa
gcccaatttatGAGATGTTTATTAGTCTAATCGCACGacgagttattttt
tctcatttggcgccccttcaaagagagcaattaatcgttaattgcatcct
gtagagagcaattaatcgttaatcacactcttcaatgacNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNact
cgtacaattcgaaaattgcactcgtgatttttttgtttcgaattttcctc
gtcctttcggactcggaaaattaataacaaaaaaatcactcgtgcaatta
atCTCGAATTGGActagttatcatgtgattacatatactaatcgtATGAT
GAAATTTTTCCGATGCTATTGCTCTAAGCCCAAACAGTGATATTATTTCC
ACATCAAGGAGTTGAGCAAGTTTAGAACTAATTTCCCTTTTACATTCTAA
AGTGTAAATGAATTTGATTACACTTCGGTATGCCCTCGTGAAATATCCTA
AATTGCCCTCCTTCCTATACGATTATTGATACGATTAGCCTGAGATATAG
TCAAACCTTTCAGGATACATATTCAACAAAACTTAACAGCGCAATCTAGT
TTGTTTTAGTATAAATACCATGAGTCTCAaattgcaaaagaaaaaaacat
ttgaaaattaatttggtTGGTTCAGAGGTGTAATGAATAAGATgtgttgt
ttgttttttaaactCGTGTTTTCTAAGCGACCAttccatcttttaacaat
aagctCAACGAGATAAACCCAATAACTACTATCATGGATATAAATTTTGA
GACAAAATAAAATTATCATCTAATCCCCCCCTCCCCCCATTCGCAATGTT
CAATGAACGGTTGGATAGTTGTGCACACTGAACCTTGCAAATGGGGAAAG
GGCGGGGGGGTTGGCACTGACATTGGCGGCtaacggggacgtgccgctag
AGTTTGAAAAGaccttgaaaattagtaaattttggtccctgtcagatatc
ttcagaggataaaaaaagggaccctgaccagcagtACCTCCCCGTTTCCA
ATTTCGCATGAGTGAGACCCCCGGGGGGAAGGGGGTCTGTTTCTACATAT
TTACTGCAAATTCCtgtgtttttctcaaacattttaGTCGATGATTATAA
ACTGCGAAAAAATGTCGCACTATTAATATTCATTAtctatctgttttttt
ttggctTCATTTTTTCAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTT
CGCATCGAAAGAGAGTGTAGATATTGATCCAGTGTACGATAGGCTGGCTG
TTTTCTGGTCTGATCGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCAT
CAAAGGTACATGcataaattattaaaaaatatttgcgTCTATTTCCCAAA
TGAACTACActtgagtctctttaactcaaaaTTCATTTAGAAATACCTTA
TAAACATTACTCCAAACTAGAAATTTCCTTACCTTGGACTAATTTGTGTT
TCCCGTGAGGgatcgagttatggagactccactataTCTTAAGGGATAAT
GACTTACTCATCTTTATCCACCAAGTAAGTCTTTTCTGGATGTATTCTTT
GCCTTTTAGACTAGACTTCAAAAGTGATAAGATTAAAAATTCCCAGTTAC
CTTATTATatccattaatttttgcacttttgCTTCGGCTATCAAATTTGT
TATGAATTATACATCTTCttaaatcaaaatcttcttgCGATTACCAGGTT
TGCGGTGACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGG
AACAATATTTCTCTACGCGTAAGTCACAACAAtttgaaaatctgaaattt
aTACCGATTTTTAGGGAGAACATTCCATATGGGACTTGATTTTTATAATG
CATTGTTTCATGATTTACTATTTCAAAACAATCCTTGCAATAGCgaatta
ctttaggcgtacaaacttttgcgagcagaaagttttcgcgatttttgcga
attttagcCCTATTTGCGGAAGTAACAAAACACTATTTTTATGCACCCAA
AACTTGAACTTTCTACTAAAATTATACctcattcgcgaaaattaagttTC
TACTCGCGAAAGTTAGTACATCTAAAGTAGCATTAAAAGATGTGGCAGTT
ATTTATTGCGTAAAGCACTTTTGAAGGTcgatattttattttcaactttc
gTGTAACGTTGAAGAACAAACATGTTTTGGCGGTAATTTTCTGTTGGTTA
GTACATTGgaaactctataactcgaatgtctcctttaGTGAatcaagttt
tatggtccctttaTTTAGAaataccttataaacctttactcgataactcg
aaaattccttaactcgaacaattttgTGTTCCCAGtgcgggttcgagtta
tggagactccgctGTATTTACTTGGCTTGACataaactctttttttattt
gcaGTGAAAAACGCTTTTGCCAAAGGAGTATCTGTAAGTAcatgtttagt
ttttttcaaaccCCTTCTCACCtatctgtaccagagtgtatctcacgttt
atcgcttcgtagtacactctgtgtgcatcgtttgtttgataaaaaaattc
ccgtacggagacttCTGCGATGAATTATGATTTAtgaatagcaacacttc
tctcatcgtctcccttctctcaccaacactccatcgcagcggtcggtttg
aaaaatatcaaataagaaaagacaatgacaacagaccctttACGgcgatg
aattttgaaattggccgtagatactgggtcagacaatcttctcacagacc
cagtacggtaggatttttttcagacagtggggataaaaataacggactga
aacttgatggggattgatatccAATATCCTTTTATGGcttgggatttcaa
ttcttttattttcaagtcaaaaatacAGTTGAGATAGTAAATATtgtgca
gtgaggattggtttatttgattattttcagtggggacaaaaattgcagaa
taattttccaccgggggaAGGGTCTGTGAATGGGTCAGTGAGGAGGAGgt
gttttttggattttgtttgtttgtactTTCAAAATGTGTATATGAATGAC
AATCCTCCAATCAGGAGAGAGAGTTATTCTCAGATGCATTGTAAATCATC
ATTCTCAACATTGGTCAAAGCAAACTCTATGATTTGGAGCTTTGTTGTTG
ATGCTCTAAGCCGATTAAACACAATCTCTCCCGTCAAGGATGACAAAGAA
GTACAAAGCGCCAATCTGGTAGATTAAGAGCATCCACTGCCAGTTGCTCT
CATCATATTACCAAACCCACGCCTCGAAGAAGAACAAAGATCtagtcaaa
ataaaagaagaacttagaACATCTGACAGTTCACCATTACATAAAAACTT
TCTCATTGACAACAAACTATTTCGAATCAACCCTGCTGAAGTTGAACAAG
AAGAAGACAGTTTTGCATACAAAGACAGTTTTGCATACAAAGACACAAAC
ATAACTAAGTAATTCCTGAATTTCATAATCCAAATCATATGAAACATATA
GGAATCAACGTAACTCTCAAGAAACTGCAACAACGTTATTACTGACGTTC
GATGGCCAAGCATGTTGTACGTCTCATAAACCATTGTTTGACATGTTGCC
AGGTTAAGGGCAGAACGACAAAAGCACCAGTTTATATAATTTCCTTTATG
GACGGATATACCGCCTGGACTGAAGCTTTTCCCAACCAAATTGATCGAGA
CTGCGGAAGTCGCGTTACGGGACTCAAAGACAATAACAACTGGGGTGTAA
TTTTACCAGGAGTCTTGTTCGCGTACATGACTACCGTCGTGAGGACAAGA
AAATTGTCACCTTTCCAGCTCTTATTTGGAAGATTGCCTGTACTTCCACC
TGATGTTGATAATACACCTATCGAGATATTAACCACTAATACTGATGATC
ATTTGAAGAGGGTTTCAGCCAGCTTATCTCACGCCAAGGGGACTGCCACA
CAACACATGAACAGGTGCCAAGTGAAGGTGGAGCATGACAATGAAAGAAA
GAACTTCGAGCAGTACACGCTTTACTCTTATGTCTGGCTCACGTCTTACA
TAAGGAAGAAAAGAAGATCACTAATCATTGAGCTGATTGATCCCACCGGT
TAGTTATCGATTAAAAACACCAAATGGGTTGATCCTGACGAATCTTGTTT
ACCATGATCGACTAAAGAGGCATGCCGGTGAAGCTCCAGAAACAACGCCG
ACAATACCAAGTAAACTGATAGCAGAAGAAACGTGGGAGGAGGAAGATGA
TGTACCGTTAAAtgaactaaaaaagaaaaaaagagactCCAGTAGGAAAA
GGAGGACAATCTTACGCTCGCTGAgctaaaacaaaaattgaagaaatatt
AATcggaattattttctttttcagactATAACAatgaaaaactttatata
tttatcAATAACCGTATCAATATGGTATCCAGCTTCGACTCAGACACTGA
AAGAAACTTGCCATACTGttgaaaaattgagtaattgcCAAACTATAATC
CCTCTTGGCTATTACACATTAccgaaaataaaagaatatactGACAAGGC
ACTAAACAGGATAGACTCAATTTCAAAGGCAAGGTTGTAAGATATACCTA
CTGTGACGTCCTTTGGAAATGTAGACTAGTTTACGTCCGAACTGAATGCT
CTGTATGGGAAGAAACCACTATCAAAACCTTGTTCCCTACCGTTACTAAA
AATGAATTTCACGGTATGGTTAAACTCGAGAGAACAACGGAATAATAAAG
AAACGCAAATTCGGACGTAACTACTAAAAAAGCACCCCAAGAAAACCTGC
ACCATGCCATATCATTACCAAAGCAAGAACACACTATGCAGCCCGTTGCG
AAATTTAAGAATACACCGTCGAGTTTATTGGTAATTCATATATTAACCTT
AAACGACATGTTTTACCAAGACTTCCCATACCAGTTAAACAAcaatcata
aattttatatactatgttaaatttaatttcaaagaatataattttttaac
gaATGTGTtatcatttgcttacacagcctttttaaagattttatttttac
ataagtgtttccgtttcatatcagacacatattttatatcaggacagtgt
ctccctattgttatattatgctgacataagcaaagaaatgtttttctttt
cctctttccgACATCCGTATTATTTCAATGTGAAGAagcttgtgaatcaa
aattgacgagtaagcaaaagcttttttcacatgtacgtaaaattttactt
atgACCTTGAAGGGCGGGAAGTCCCCTAAGCTTACGTATAGTGTTTTAAA
GCCCTTATGTAGAGTTTGCTTtatgttcaaaaagttttgaacggaaggaa
aagtcacgtaagaccctcttaatcaacaaaaactctacataatgtcgggg
aaattcccaaaagacagccttacaAACGATTTCCGcctttttcacatgca
cgtaaaattttacttatgACCTTGAAGGGCGGGAAGTCCCCTAAGCTTAC
GTATAGTGTTTTAAAGCCCTTATGTAGAGTTTGCTTTATGtgcaaaaagt
tttgaacggaaggaaaagtcacgtaagaccctcttaatcaacaaaaactc
tacataatgtcggggaaattcccaaaagacagccttacaAACGATTTCCG
cctttttcacatgcacgtaaagttttactttagaccttacggAAAATCGT
AATCGAGCTTGGTACTAAAATTAAGCTAAGAATAACTGGTGCCTGTTTCC
TAAAGATTAGCACGGAATTGCAAGTAAACCCAGCTGTAAACCGAAACccg
tttacacgttttttttataagaacatccaaaatttttgaacccttagatg
ttcttaactttttgagttttaagcctaaaaatgttcttaatatgttctta
ttttcaccatttttatttttttgtccattttcctaagaaattgggtgttt
tagagtcttatgttcttgtatagtttcttataaaaaaacgtgtattcttt
tTTGTTCAGGTCGATTCGGATGAGCCGCAAAGTAAAAATGTGACTACTTC
ATCGTCAGCAACAAGTCAAAAAGCTCAACATCCATCATCCagcaataaca
ataaaactCTCTCTGAAAGAAATAATGACTATGACGAAAATGTGAAATAT
GGACGAGTTCCTACTGACTCAACAAGCTGACATCTATTCTGTTAATGTTT
CATTGATTATCGATTGCTTGTGGAGAAATATCACAGTTGAAATGTTCAGT
CGAATGAGATTACATTTACACATGCTGAATACAGAATCTGAAGACCACTT
CTGAGCTTCAAAATCCTCACTGGGCATTGATCTACAAGTCCATTCCTAGC
ACTTCACATATGAAAATGACAGCTAAACTTGAATATTACCCCTTATGATG
TTTTTGGTACAGAGGTTGAAAAAAGACGTATATTATCTCAATAAGGTatt
aagggctacatacactacacaatatattgatgaaCAATATctgacaatat
ggtttgcggaccgtaatgtactaAGTAAATAGTAgatattttattataaa
aaggaattttctttttgtaaacaatcaccctttattgttggaatattgca
aatagagctgacaatatattgcggaaaccttttcaatatattgccagtat
tcagcaatatattatcaatatattggctgacaatatattgcgtaGTGTAT
GTAGTCCTTTATGTTTACTGATAACGAGTTTACCGCGAACTAGTGCGGTT
CATACAAGACCATGTTGAGAGGTTACACCTCTTTTGACTTATGTTCGGAC
GGGCACATCATTTCAGCTTTCTCATAGACGATGCTATCATCGTCCGTCAG
AGGAGAGGGATAGTAAACGCGGGTAATATGCCCAGAGTTTACAGCCATCA
CGGCGATTTACGAGAAAAATAGTGGCGGTAGGTTTTTGCCCCCTTTCGCA
AAACCTAGTTGTAACTGTAAAGTGTTAAGCTTCGTTAACATGAAGGGCTC
ATTGTTTTGTTATGTTTTATGAGATTTGAAATTTAGCATCGATTTAAATT
TAGCATCGATttaaattttgtatttatttgcATTAGTTGTTAGTTCGGGA
ACACTTTCCTTGTCCTTGTAGAGATTGAGAACAAGTTTGTTGTTAGAGGC
TTCAACATACTAGCATGTGGGACCTAAAATATTAATTCAGAGAGGTTGCA
CTGTGAAATTTAATTATATAGGTAGtggaataaaaacaattttcattttt
taagaattttaaaatactttttttatttcgtacacaaattgtaaatatta
taaaaccaaagatttattatagaAACTGCATATACTGCTGATTGATTTTC
GCTGTTTTCTCGTGTTCTAGCCAATGAGTAAAATCCCAGCCGAAGTCAGG
AAAATACAACGTAACACTTAGCACATGCTTAAAAATTCGCCATATCTGAg
actagatatgcttataagtgcaatgcttataaaaacatgtagcTGAATGC
TGCACAACGTTGTTTGTGAGAAAAATCCACCTTGCCTCAACGTACCACCA
AAAGATTGTTTAGA

Coding sequence (CDS) from alignment at sc0000264:216792..227455+

>TCONS_00017281 ID=TCONS_00017281|Name=TCONS_00017281|organism=Clytia hemisphaerica|type=CDS|length=9492bp|location=Sequence derived from alignment at sc0000264:216792..227455+ (Clytia hemisphaerica)
ATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTCATCTGAGAAAAC
TGATGGGGGATCAATTGACATCAACAAAGGAGATTCAACTTCTGGCGATC
AAAGAATTACAAAGGAAGATGACAgtgaaattaaagaaaaatgcgAATAC
TGTGGGTCGGCagaaaataaacttttcagATGTGCAAGGTGCAAACTTGT
CTACTATTGTAACCGAAACCATCAGAAATTACATTGGCAACTCCATAAAC
CAGAATGCAGTATCACCATAACCCCTGGTACATCATCTACACCAAGAGAT
TCTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAGTGTCATTCGACA
GACAGCTAATATCCATTCCACAGATATGAACAATCCACGTGCCCACATGA
TTCCTTTGTACGCTGTTCGTGATTACGATATGGACGTGGATGACTACACA
ATAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGATGGTTTTGAAGA
TCGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTAAACAGATGCATG
ATGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAAACCAAATCTGCC
AAAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGGCATCATGAAACC
TGGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaagaaaaggtCAGAG
GAGATGTCATCACTTGGATCACTGGACAGGAAGAGACTTATGAGAATATG
CCTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTATTGTAATGGAAG
ACTGGGTAATATCAAAGGAAGGACACCGGCAATGGTAGCGACGTACCCAG
GAGATGGCACAGGTTATAAGCGTCATATTGATAACACTTTGAAAGACGGC
CGTGCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTGGCAGTCGGAGGC
TTATGGTGGCCAGTTGCGTTTGTTTCCGTTCGCATCGAAAGAGAGTGTAG
ATATTGATCCAGTGTACGATAGGCTGGCTGTTTTCTGGTCTGATCGCCGT
ACTCCCCACGAGGTGCTACCTGCTTTCCATCAAAGGTTTGCGGTGACGTT
GTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGGAACAATATTTCT
CTACGCTGAAAAACGCTTTTGCCAAAGGAGTATCTGTCGATTCGGATGAG
CCGCAAAGTAAAAATGTGACTACTTCATCGTCAGCAACAAGTCAAAAAGC
TCAACATCCATCATCCagcaataacaataaaactCTCTCTGAAAGAAATA
ATGACTATGACGAAAATGTGAAATATGGACGAGTTCCTACTGACTCAACA
AGCTGAATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTCATCTGA
GAAAACTGATGGGGGATCAATTGACATCAACAAAGGAGATTCAACTTCTG
GCGATCAAAGAATTACAAAGGAAGATGACAgtgaaattaaagaaaaatgc
gAATACTGTGGGTCGGCagaaaataaacttttcagATGTGCAAGGTGCAA
ACTTGTCTACTATTGTAACCGAAACCATCAGAAATTACATTGGCAACTCC
ATAAACCAGAATGCAGTATCACCATAACCCCTGGTACATCATCTACACCA
AGAGATTCTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAGTGTCAT
TCGACAGACAGCTAATATCCATTCCACAGATATGAACAATCCACGTGCCC
ACATGATTCCTTTGTACGCTGTTCGTGATTACGATATGGACGTGGATGAC
TACACAATAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGATGGTTT
TGAAGATCGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTAAACAGA
TGCATGATGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAAACCAAA
TCTGCCAAAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGGCATCAT
GAAACCTGGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaagaaaagg
tCAGAGGAGATGTCATCACTTGGATCACTGGACAGGAAGAGACTTATGAG
AATATGCCTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTATTGTAA
TGGAAGACTGGGTAATATCAAAGGAAGGACACCGGCAATGGTAGCGACGT
ACCCAGGAGATGGCACAGGTTATAAGCGTCATATTGATAACACTTTGAAA
GACGGCCGTGCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTGGCAGTC
GGAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTTCGCATCGAAAGAGA
GTGTAGATATTGATCCAGTGTACGATAGGCTGGCTGTTTTCTGGTCTGAT
CGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCATCAAAGGTTTGCGGT
GACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGGAACAAT
ATTTCTCTACGCTGAAAAACGCTTTTGCCAAAGGAGTATCTGTCGATTCG
GATGAGCCGCAAAGTAAAAATGTGACTACTTCATCGTCAGCAACAAGTCA
AAAAGCTCAACATCCATCATCCagcaataacaataaaactCTCTCTGAAA
GAAATAATGACTATGACGAAAATGTGAAATATGGACGAGTTCCTACTGAC
TCAACAAGCTGAATGGATTCATCTGGTGGCACTTCTAAAGTAAATGTTTC
ATCTGAGAAAACTGATGGGGGATCAATTGACATCAACAAAGGAGATTCAA
CTTCTGGCGATCAAAGAATTACAAAGGAAGATGACAgtgaaattaaagaa
aaatgcgAATACTGTGGGTCGGCagaaaataaacttttcagATGTGCAAG
GTGCAAACTTGTCTACTATTGTAACCGAAACCATCAGAAATTACATTGGC
AACTCCATAAACCAGAATGCAGTATCACCATAACCCCTGGTACATCATCT
ACACCAAGAGATTCTACTGGTGGTGGTGGGATGACATCTAAACCAGTCAG
TGTCATTCGACAGACAGCTAATATCCATTCCACAGATATGAACAATCCAC
GTGCCCACATGATTCCTTTGTACGCTGTTCGTGATTACGATATGGACGTG
GATGACTACACAATAACAAGCTCCCCAGCTATCAGTAAATTATCGCAAGA
TGGTTTTGAAGATCGAGAGGTGGTCCAGAAATTTGCTGATTATTTAGTTA
AACAGATGCATGATGAGGGTTACTGTATTATTGATGATTTTCTTGGTGAA
ACCAAATCTGCCAAAGTGTTGTGGGATGCTGTTACTCTCCTACAGTCTGG
CATCATGAAACCTGGTCAAGTCATCAAAAAGAACGAAatcaaaggaaaag
aaaaggtCAGAGGAGATGTCATCACTTGGATCACTGGACAGGAAGAGACT
TATGAGAATATGCCTCTGATTATGAATCGTGTTGATAGGTTGATCAGGTA
TTGTAATGGAAGACTGGGTAATATCAAAGGAAGGACACCGGCAATGGTAG
CGACGTACCCAGGAGATGGCACAGGTTATAAGCGTCATATTGATAACACT
TTGAAAGACGGCCGTGCGCTGTCTGTGTTGTATTATTTGAATAAAGGTTG
GCAGTCGGAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTTCGCATCGA
AAGAGAGTGTAGATATTGATCCAGTGTACGATAGGCTGGCTGTTTTCTGG
TCTGATCGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCATCAAAGGTT
TGCGGTGACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAGTAAAGG
AACAATATTTCTCTACGCTGAAAAACGCTTTTGCCAAAGGAGTATCTGTC
GATTCGGATGAGCCGCAAAGTAAAAATGTGACTACTTCATCGTCAGCAAC
AAGTCAAAAAGCTCAACATCCATCATCCagcaataacaataaaactCTCT
CTGAAAGAAATAATGACTATGACGAAAATGTGAAATATGGACGAGTTCCT
ACTGACTCAACAAGCTGAATGGATTCATCTGGTGGCACTTCTAAAGTAAA
TGTTTCATCTGAGAAAACTGATGGGGGATCAATTGACATCAACAAAGGAG
ATTCAACTTCTGGCGATCAAAGAATTACAAAGGAAGATGACAgtgaaatt
aaagaaaaatgcgAATACTGTGGGTCGGCagaaaataaacttttcagATG
TGCAAGGTGCAAACTTGTCTACTATTGTAACCGAAACCATCAGAAATTAC
ATTGGCAACTCCATAAACCAGAATGCAGTATCACCATAACCCCTGGTACA
TCATCTACACCAAGAGATTCTACTGGTGGTGGTGGGATGACATCTAAACC
AGTCAGTGTCATTCGACAGACAGCTAATATCCATTCCACAGATATGAACA
ATCCACGTGCCCACATGATTCCTTTGTACGCTGTTCGTGATTACGATATG
GACGTGGATGACTACACAATAACAAGCTCCCCAGCTATCAGTAAATTATC
GCAAGATGGTTTTGAAGATCGAGAGGTGGTCCAGAAATTTGCTGATTATT
TAGTTAAACAGATGCATGATGAGGGTTACTGTATTATTGATGATTTTCTT
GGTGAAACCAAATCTGCCAAAGTGTTGTGGGATGCTGTTACTCTCCTACA
GTCTGGCATCATGAAACCTGGTCAAGTCATCAAAAAGAACGAAatcaaag
gaaaagaaaaggtCAGAGGAGATGTCATCACTTGGATCACTGGACAGGAA
GAGACTTATGAGAATATGCCTCTGATTATGAATCGTGTTGATAGGTTGAT
CAGGTATTGTAATGGAAGACTGGGTAATATCAAAGGAAGGACACCGGCAA
TGGTAGCGACGTACCCAGGAGATGGCACAGGTTATAAGCGTCATATTGAT
AACACTTTGAAAGACGGCCGTGCGCTGTCTGTGTTGTATTATTTGAATAA
AGGTTGGCAGTCGGAGGCTTATGGTGGCCAGTTGCGTTTGTTTCCGTTCG
CATCGAAAGAGAGTGTAGATATTGATCCAGTGTACGATAGGCTGGCTGTT
TTCTGGTCTGATCGCCGTACTCCCCACGAGGTGCTACCTGCTTTCCATCA
AAGGTTTGCGGTGACGTTGTGGTATTTCGACGCGGCTGAACGGGAGCAAG
TAAAGGAACAATATTTCTCTACGCTGAAAAACGCTTTTGCCAAAGGAGTA
TCTGTCGATTCGGATGAGCCGCAAAGTAAAAATGTGACTACTTCATCGTC
AGCAACAAGTCAAAAAGCTCAACATCCATCATCCagcaataacaataaaa
ctCTCTCTGAAAGAAATAATGACTATGACGAAAATGTGAAATATGGACGA
GTTCCTACTGACTCAACAAGCTGAATGGATTCATCTGGTGGCACTTCTAA
AGTAAATGTTTCATCTGAGAAAACTGATGGGGGATCAATTGACATCAACA
AAGGAGATTCAACTTCTGGCGATCAAAGAATTACAAAGGAAGATGACAgt
gaaattaaagaaaaatgcgAATACTGTGGGTCGGCagaaaataaactttt
cagATGTGCAAGGTGCAAACTTGTCTACTATTGTAACCGAAACCATCAGA
AATTACATTGGCAACTCCATAAACCAGAATGCAGTATCACCATAACCCCT
GGTACATCATCTACACCAAGAGATTCTACTGGTGGTGGTGGGATGACATC
TAAACCAGTCAGTGTCATTCGACAGACAGCTAATATCCATTCCACAGATA
TGAACAATCCACGTGCCCACATGATTCCTTTGTACGCTGTTCGTGATTAC
GATATGGACGTGGATGACTACACAATAACAAGCTCCCCAGCTATCAGTAA
ATTATCGCAAGATGGTTTTGAAGATCGAGAGGTGGTCCAGAAATTTGCTG
ATTATTTAGTTAAACAGATGCATGATGAGGGTTACTGTATTATTGATGAT
TTTCTTGGTGAAACCAAATCTGCCAAAGTGTTGTGGGATGCTGTTACTCT
CCTACAGTCTGGCATCATGAAACCTGGTCAAGTCATCAAAAAGAACGAAa
tcaaaggaaaagaaaaggtCAGAGGAGATGTCATCACTTGGATCACTGGA
CAGGAAGAGACTTATGAGAATATGCCTCTGATTATGAATCGTGTTGATAG
GTTGATCAGGTATTGTAATGGAAGACTGGGTAATATCAAAGGAAGGACAC
CGGCAATGGTAGCGACGTACCCAGGAGATGGCACAGGTTATAAGCGTCAT
ATTGATAACACTTTGAAAGACGGCCGTGCGCTGTCTGTGTTGTATTATTT
GAATAAAGGTTGGCAGTCGGAGGCTTATGGTGGCCAGTTGCGTTTGTTTC
CGTTCGCATCGAAAGAGAGTGTAGATATTGATCCAGTGTACGATAGGCTG
GCTGTTTTCTGGTCTGATCGCCGTACTCCCCACGAGGTGCTACCTGCTTT
CCATCAAAGGTTTGCGGTGACGTTGTGGTATTTCGACGCGGCTGAACGGG
AGCAAGTAAAGGAACAATATTTCTCTACGCTGAAAAACGCTTTTGCCAAA
GGAGTATCTGTCGATTCGGATGAGCCGCAAAGTAAAAATGTGACTACTTC
ATCGTCAGCAACAAGTCAAAAAGCTCAACATCCATCATCCagcaataaca
ataaaactCTCTCTGAAAGAAATAATGACTATGACGAAAATGTGAAATAT
GGACGAGTTCCTACTGACTCAACAAGCTGAATGGATTCATCTGGTGGCAC
TTCTAAAGTAAATGTTTCATCTGAGAAAACTGATGGGGGATCAATTGACA
TCAACAAAGGAGATTCAACTTCTGGCGATCAAAGAATTACAAAGGAAGAT
GACAgtgaaattaaagaaaaatgcgAATACTGTGGGTCGGCagaaaataa
acttttcagATGTGCAAGGTGCAAACTTGTCTACTATTGTAACCGAAACC
ATCAGAAATTACATTGGCAACTCCATAAACCAGAATGCAGTATCACCATA
ACCCCTGGTACATCATCTACACCAAGAGATTCTACTGGTGGTGGTGGGAT
GACATCTAAACCAGTCAGTGTCATTCGACAGACAGCTAATATCCATTCCA
CAGATATGAACAATCCACGTGCCCACATGATTCCTTTGTACGCTGTTCGT
GATTACGATATGGACGTGGATGACTACACAATAACAAGCTCCCCAGCTAT
CAGTAAATTATCGCAAGATGGTTTTGAAGATCGAGAGGTGGTCCAGAAAT
TTGCTGATTATTTAGTTAAACAGATGCATGATGAGGGTTACTGTATTATT
GATGATTTTCTTGGTGAAACCAAATCTGCCAAAGTGTTGTGGGATGCTGT
TACTCTCCTACAGTCTGGCATCATGAAACCTGGTCAAGTCATCAAAAAGA
ACGAAatcaaaggaaaagaaaaggtCAGAGGAGATGTCATCACTTGGATC
ACTGGACAGGAAGAGACTTATGAGAATATGCCTCTGATTATGAATCGTGT
TGATAGGTTGATCAGGTATTGTAATGGAAGACTGGGTAATATCAAAGGAA
GGACACCGGCAATGGTAGCGACGTACCCAGGAGATGGCACAGGTTATAAG
CGTCATATTGATAACACTTTGAAAGACGGCCGTGCGCTGTCTGTGTTGTA
TTATTTGAATAAAGGTTGGCAGTCGGAGGCTTATGGTGGCCAGTTGCGTT
TGTTTCCGTTCGCATCGAAAGAGAGTGTAGATATTGATCCAGTGTACGAT
AGGCTGGCTGTTTTCTGGTCTGATCGCCGTACTCCCCACGAGGTGCTACC
TGCTTTCCATCAAAGGTTTGCGGTGACGTTGTGGTATTTCGACGCGGCTG
AACGGGAGCAAGTAAAGGAACAATATTTCTCTACGCTGAAAAACGCTTTT
GCCAAAGGAGTATCTGTCGATTCGGATGAGCCGCAAAGTAAAAATGTGAC
TACTTCATCGTCAGCAACAAGTCAAAAAGCTCAACATCCATCATCCagca
ataacaataaaactCTCTCTGAAAGAAATAATGACTATGACGAAAATGTG
AAATATGGACGAGTTCCTACTGACTCAACAAGCTGAATGGATTCATCTGG
TGGCACTTCTAAAGTAAATGTTTCATCTGAGAAAACTGATGGGGGATCAA
TTGACATCAACAAAGGAGATTCAACTTCTGGCGATCAAAGAATTACAAAG
GAAGATGACAgtgaaattaaagaaaaatgcgAATACTGTGGGTCGGCaga
aaataaacttttcagATGTGCAAGGTGCAAACTTGTCTACTATTGTAACC
GAAACCATCAGAAATTACATTGGCAACTCCATAAACCAGAATGCAGTATC
ACCATAACCCCTGGTACATCATCTACACCAAGAGATTCTACTGGTGGTGG
TGGGATGACATCTAAACCAGTCAGTGTCATTCGACAGACAGCTAATATCC
ATTCCACAGATATGAACAATCCACGTGCCCACATGATTCCTTTGTACGCT
GTTCGTGATTACGATATGGACGTGGATGACTACACAATAACAAGCTCCCC
AGCTATCAGTAAATTATCGCAAGATGGTTTTGAAGATCGAGAGGTGGTCC
AGAAATTTGCTGATTATTTAGTTAAACAGATGCATGATGAGGGTTACTGT
ATTATTGATGATTTTCTTGGTGAAACCAAATCTGCCAAAGTGTTGTGGGA
TGCTGTTACTCTCCTACAGTCTGGCATCATGAAACCTGGTCAAGTCATCA
AAAAGAACGAAatcaaaggaaaagaaaaggtCAGAGGAGATGTCATCACT
TGGATCACTGGACAGGAAGAGACTTATGAGAATATGCCTCTGATTATGAA
TCGTGTTGATAGGTTGATCAGGTATTGTAATGGAAGACTGGGTAATATCA
AAGGAAGGACACCGGCAATGGTAGCGACGTACCCAGGAGATGGCACAGGT
TATAAGCGTCATATTGATAACACTTTGAAAGACGGCCGTGCGCTGTCTGT
GTTGTATTATTTGAATAAAGGTTGGCAGTCGGAGGCTTATGGTGGCCAGT
TGCGTTTGTTTCCGTTCGCATCGAAAGAGAGTGTAGATATTGATCCAGTG
TACGATAGGCTGGCTGTTTTCTGGTCTGATCGCCGTACTCCCCACGAGGT
GCTACCTGCTTTCCATCAAAGGTTTGCGGTGACGTTGTGGTATTTCGACG
CGGCTGAACGGGAGCAAGTAAAGGAACAATATTTCTCTACGCTGAAAAAC
GCTTTTGCCAAAGGAGTATCTGTCGATTCGGATGAGCCGCAAAGTAAAAA
TGTGACTACTTCATCGTCAGCAACAAGTCAAAAAGCTCAACATCCATCAT
CCagcaataacaataaaactCTCTCTGAAAGAAATAATGACTATGACGAA
AATGTGAAATATGGACGAGTTCCTACTGACTCAACAAGCTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009670	XLOC_009670	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00017281-protein	TCONS_00017281-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000264	supercontig	sc0000264:216792..227455 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.9357	6.82036	3.08902	2.27938	18.2611	14.4964	17.4211	18.4905	14.2696	15.9535	13.5101	10.7923	11.7096	11.4209	16.703	16.2204	18.9648	18.0093	10.945	14.2487	16.4734	16.7795	19.2333	19.3104	8.05343	9.69939	10.7472	8.60781	18.7923	19.0486

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR006620	Pro_4_hyd_alph
IPR005123	Oxoglu/Fe-dep_dioxygenase
IPR002893	Znf_MYND
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0031418	L-ascorbic acid binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0031418	L-ascorbic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Blast

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BLAST of TCONS_00017281 vs. Swiss-Prot (Human)
Match: EGLN1 (Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.116e-62
Identity = 105/228 (46.05%), Postives = 149/228 (65.35%), Query Frame = 3

Query:  735 DYLVKQMHDEGYCIIDDFLGETKSAKVLWDAVTLLQSGIMKPGQVIKKNEIKGKEKVRGDVITWITGQEETYENMPLIMNRVDRLIRYCNGRLGN--IKGRTPAMVATYPGDGTGYKRHIDNTLKDGRALSVLYYLNKGWQSEAYGGQLRLFPFASKESVDIDPVYDRLAVFWSDRRTPHEVLPAFHQRFAVTLWYFDAAEREQVKEQYFSTLKNAFAKGVSVDSDEP 1412
            +Y+V  M+  G C++DDFLG+    ++  +   L  +G    GQ++ +     K+ +RGD ITWI G+E   E + L+M+ +D LIR+CNG+LG+  I GRT AMVA YPG+GTGY RH+DN   DGR ++ +YYLNK W ++  GG LR+FP    +  DI+P +DRL  FWSDRR PHEV PA+  R+A+T+WYFDA ER + K +Y +       KGV V+ ++P
Sbjct:  196 EYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKD-IRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTG-----EKGVRVELNKP 417

The following BLAST results are available for this feature:

BLAST of TCONS_00017281 vs. Swiss-Prot (Human)

BLAST of TCONS_00017281 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EGLN1	1.116e-62	46.05	Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 S...	[more]

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TCONS_00017281 (transcript) - C. hemisphaerica