XLOC_009730 (gene) - C. hemisphaerica

Overview
NameXLOC_009730
Unique NameXLOC_009730
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000266:127999..134472-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009730 ID=XLOC_009730|Name=XLOC_009730|organism=Clytia hemisphaerica|type=gene|length=6474bp|location=Sequence derived from alignment at sc0000266:127999..134472- (Clytia hemisphaerica)
TTCAAGTTCTAATTTTGAAATTCTTCATAAAGTGGCTCGATCTGGTAAGT CTCAATTTATGACTTGGCTATCTCTTATTTTTGACTAATGTCCAAAAGAA TGTTTGGTCTAAAAATACGACGTAAAAGGTTGCAACAAGTAAACAAAACA AATAACAAATGTTTTGACCAAAACAACTCGTGACTTTTCCCTTTGTTTTG GACTAAAAAACAACATTGTTGACGTCAAAGCTCGACTAGTCAAAATTTTA CGTGCAAGATTTTGGTGATTGGTATTTACGTTGTCGACAATTAATTAACA CTTGTTCTATTTTTATGGTACACACTCACGCCACACCCCTTTCTCATAGA TAGGACCGACAAGAACGTTTTTGCTCCCTTTTGTGAAAAATACCAAAGAT GTGTAAACCTGGGTATAACTATAAAGAAAGAAGAAGAAGAAGAAGGCTAT TGCTCAGTTTTCACTAAATTTTTTATGCACGTTGTTTTGAAATATAAGAA CATCAACTTTTTGAGCTTTCTGTCTTTCTTTCTTTATGTTTTTAAGTCTA AAATGGTGGTCTTAACATGTTCTAATTTTGGACATTTTGTGAGAATTTTT GTTCATTATCCTAAGAAATTGCACACGCTATCATGGAGTCCACAAAGCTT AAAATGTTCTTAAAGTGTTCATCGAAGCCCATGTTCCTATACAGTTTGTT CCCAGGGGGGGGCACTCGATTTTGAAAACGATCGTACGTTCGACCAAAAA TCAGGTCTCTAAAATCGGACTCTTACAGTGCAGGAAAAATTTGTCAGAAA ATCGACCCTTATAGTGCAATATTTTTCGAATTTTTTTGCCCTTTTTAGGG CAAAATTTTTTGAAATTTCTCAAATTTTACCTCAAAATTTGGTATTTTCT CAAATTTTACACCCTTACAGTGCACTTTTTCCCACTTAATCACAAATCAA CCCTTACATTGCACTTTCCAAAGTCCAAAAGCCTACCCTTAAGGGCCGCA CATCCGGTAGGTCACTTACCTGGAATGCCCCCCCCCGGGGTTTGTACTTG TAAAAAAAACATATTTGTGTAAGTGTAAGTAAATTAAAAGTCCTGAAAAA TTTGTCGGAATTTTGCGTTCAGAGAAAACAATCAAATTGTCACATGCTTT CTATTGAATTGTCTTGGGCTACCTCAGGTAAGTTATGGCATGTCTCAAAA ACCTGAAAATTACCATAATTTTTGAAGACCATTAGCCGGCAGAAAATGGG GAAACCGATGATTTGCTACGAAGGGTACCATGATGAAGTTTCGCTGTAGG GGTGTTACCTAATTGTTTACGCCCTTATTTTCGCGAAAAACCGCAAAAAC TAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAAAACTTGTTT TTTAAATAACTCCAGTTTGGCTAAAGATAGAAGCATGAAATTTGGACTGA AGTTGCATATCATTAAAAGGATCATTTTGCAAAAAAAGATTTTGAAGTTT TGCTGACATCAGCACTTTATTGCAAAATTTCGTATTTTGTTGATTTCTGC TGACGAAAGCAAAATTTCAAAAAGTTTTTTTTTGCAAAATGATCCTTTTT GCATTTGATCTTTGTGTAAAAACATTTTGACTATTGCGAGTCAAGATCAC TAGGAAAATATATAGTTTCTTTTAGCGTGATGATGTGATCGAGGTTTTGT ATTGTTATGCATGAAAGGGCAAACTCGAACCCATTCCCTTAGTTCACTTA GTACAATAGCGCTCAAGATTGTAACCACGGCTATCTGTAAAATTAAAAAA AAGTAATGCGATTAGGCCAATTAGGTACGACTACGAGATCCGTGAAAGGA TAGGCGAAGCGAGATACCCTGCAAAATTTATGAGGGAGTGGGAGACGTTT ATGACATATTCATTATATTTTGATAAAACAAAGACAATAATTACAGTTTT GTAAAAATCGGTAAAAACCGCTCTCATCCATAAATTTTGCAGGGTGGTAT CTCGCGTGTGAAACTTGAAAGGGCAAAAATTTGATTGAGATGTGTGATGT GAATGATGATGCATGTGATTTGGGTTTGTGAGTGAACAATCATGTTCATG GAATACTTTTTCAGAGTCATATAATATAAAGTGAACTAAAAAAAGGGCTG GACGCTCCAGTTTTGGACCCCCGCCCTATATTTCCACCCACTGGCGCGCA CGCCATTCCATCAANAAGTGAACTAAAAAAAGGGCTGGGCGCTCGAGTTT TGGACCCCCGCCCTATATTTCCACCCACTGGCGCGCACGCCATTCCGTCA AAAAGTGTTTGATCAGCCGCACCAATATTCAGTTTATAGAAGACGTGTTC GTAAACACAACACGTGCTCATTAAAAGATGGTTGATTGAAAATGGTGAAA AATGGGGGAGTTTCTTAATAGTGTTTACTAGTGTTTGTTTTAAACTTCCT ATTGTCTAGAGATTGTTGTGTAAATCAGAAAGAATATAGAGTATGGAAGA CGTTGTTGAGATGTGGTCATGGGAGCTCATTGCTGCTCATATTTGAAGTA GCAGAGGGGGATTTTGATCAAAATTTCTAGGTCAGAATGATATAAATTTT GGCCCCCTCTCCCGCCTGCCCCTGCCTAAGCCTACCTGGTGGAGATCCTT GCTATGATTTTTGATTCATATACTGTTAGCGAAATGAATAGCATAATCAG GGCTGAGAATTTAAAAGTTTCAAATTTCCTGGCCAAACAACGCACGTTGA TAAAGAATCTACCGTAGCTTTGTGTAATGTCAACAGTTCACATATACCTT CAGTAGTTGTCTAATTCTAAATGGTCAACTATCAAAACTATCAACTATCT GGTCTGCAAAGTAGTTACAGGTAGTTAGAGTGTTTTTTTAAACAGTTTAT TTCAGAAGGTTTTATCTATAATAAACATATTAAAGACCGGATATAGTTGC CACACTCACTTCCAACAAAAACAAAAGAACAAGAACAAAAATAAGGGATG GTTTTTTTTTTAGCAAAAATTTTTTCTCTTTTGATCCAAAAATACCTGAG AGACTAACAAAATCATTCACATGGCAAATCTAAAATATTAAAATATATAT CTGACAAAGACAAAGCACACTCTTGATCAAACTGATGGGAAAAATTTATC TTAGGGGCTGAATAGACCTTTTTTCAAAGAGGACGTCCTGTTGAATAGAC CTTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCAGCCATAA AAACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTAATAA TTATGCATGGTTTTATCATTTTTTTCTGCTGGACTACATAATTATTCAAC AGGGTGGCCTCTTTGAAAAAAGGTCTATAATTATGTAGTCCAGCCATAAA AACAATGATAGAGCCATGCATAATTACTTCTTACGTCAAGGTGACCAAGG CATGTTCATTAACCATCTAAATACATACTTTCCTTTAAACAGTCTTTCAT GTAGATTCTGGAATGCTCACTGTAATAATATTTACGAACAAGACATGTCA CTCTCATCTTTCACTGATAGATTGAAGAATAAATTCTTGCAATAAACAAC TAATTTCTGATACGAAATCAAGTCGTTTGTATTCCCTTTACTTTTTCTCT TGAGGAATCATACATACCATGTAAATATCTGTAAATAGTTCTTCCTCTGT TTCTCTTTGTTCAATAAATTTCATTTACTTACATTCTTGATGCCAATAGG CACATTTAAAAGCTGTCTTTGCCACTATATATTTTATGTTAAGTATATTT ATTTTTCTTAGCATAGTTTATGCTAATACTTACATTTTACTTATATTTTA TTTAGAAGTATATTATTTAGAACCCACTATATTTATTTTAACTATTTAGC TTTTAGGAACAACATTATCCTTTGTATCACCGCTAAGGTGATATTTTTTT AGATATTCTATTTTTTAAATGTACATAGAACCAAAGCCCAAAAGGGCTGA CTTGTGTACATAGACATATTTCGGAAACTATTATTAGAAAAGAAATCAAA TCAAATCAAAAATCATTACTGTATCATGCATATTGTAATAATTATGCGTG GTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGC CTCTTTGAAAAAAGGTCTATTTTGCTCATTCAGTTCCAAAAATACAGTCA AAATTTGGTCTGTCAGGATCTAAACTTTTCGTGGTACAGGGCCTATATTT CCAAACCCCATGAAATGCTCTTTATCTTCTATATACCTCTAGAATTCTCT TGTCCTTCTATAGCCTAAAATGTAAACTTGCTGTAAAAAGAACAATCCAT AGTAAACAATAAACTAAATGTCATGAGCCTGCTTTGCTGCTACATTTTCA TAGTATTATTTCTGCTTTTTATTTGTAAATTCTTGTCATTTTTGTAATTA TACTTCCTCTTTCAAAACAACAAATTCTGACAGGTCTTGTGTAATGTTTA CATTAGATTTAAAATTTCTGTAAACTTTGTTTTTGAATTGCATCATCAAT CATATCTCATATTTCAGTCTGTTGTGTTCTTATCACACAATATCATAAGT TCGACTTATTCTTAGAGAGCCTTTTTTTAGGTAAAGAGTCCAGATGAAAT CATTATTTAGAAGGCTCTTAAAATATATGACCTAAAAACTAGAAGTTGTA ACAAACACTTGAAACACTACAATATTAGATTCCATTTGCTTTAATTGTGT ATCTTAACCCTATATGACTTTGTATCCCTAATGAGCATCCCTTGGATTTC ATCCTATGCAAAAAATGAAAATGAAAGTTCTTAAAAAGAAAATCATAAAA AATAGACCCCTGCTCTTTTTCGTTATAATTATATTAAGAATAATCAAGCC AAAAGGGATAAAATGAACGGAATAGGTGCCTCTGGGATAAGATCATAGGT TCTATTCTCAATGCCAATGAAAGAGATTCGAAGGAATTCCATGGAAACCC ATTTGTTTTGTGACATCAGGTTGTATCTGGGAAAGTTCTGAACTAAAAAG CAGCACCAACTATTTGCTAGTGTTAGCAAAATAATTACAGATTCGTTGTA TTTCAGTTGAAAATCCAAAATGTCACTGTTGGCACGTCAATCAAGTAAAC TTTTGAGGTTAGCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTC TCTGCACTTTCGACAAGCTCTGCAAGATTGGGTGAGTAATCTTATTCACT TTACCTTGTGTTAACTTCTAAATATTTTTTACCTAGTTTTTTGCTGTATA TTTATAACTCTTTGATTCAGAATCAGTCTATTTATAAATTTCTGTTCTGT ATCCATGCTTTCATTTTTGGTAATCAGCAATAATCATTTTTAGACAAAAA GTTGTTTACACCTGGTCCACTTGGTGTCAATCATGAAACAAAAACAGCAA TGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTATGAACACAGTCAAA TACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATTTCAACAGATACTTA TACTATGGTTCCAATGCAAGGGAGTGGTACTTTTGCTATAGAAGGTGTCA TCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGTTGATTGCGACTTCT GGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAATATTTGGATATTGA AACGGTAAAAGTCATGTTTTAAAGAAAGAGAAAAAGAAAAACCTTTTCAG CTTGAAGAGCTCTCTTGATAAAATATCAATACTCTAATGCATTGAAACCA GGCTAAACGTAACCTATAATTTGTAAAAAATCACGGAAGAAATACTTTTG CATCTCTCAAATATTAATATTGTTGACTGTTATTGTTGCTTTGTTTTTCT TTTTTTGTCATCACAATATTTTGTTTCTCTATTCAGACTTTGTTGAAATT CAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAG CTGATCCGTCCATCACTCACGTCTCAATGGTGCACTGTGAAACCTCTTCA GGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATGGTAAAGAGAGTCGC CCCTAATGCTGTCTTTTTCGTTGATGCAATGAGCAGTTTCGGAGGCGTTC CTTTAGAAGTTTCGAATATTGATTTTCTTGTTACATCAGCTAATAAGTGC TTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAAGACAAATT AATGGAATGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGTTTATGAGC AATATTTAGGATTGGAGAGTAATGGACAGTTCCGCTTCACACCACCAACG CATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAACAAGAAGG AGGTGTTGAAGGCCGATCAAATAGGTATGTCATAAAGCTTTATACTGCCT TGTACATTTTACTTTATTACTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017382TCONS_00017382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017382-proteinTCONS_00017382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:127999..134472 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.04 78.35 92.08 78.05 9.34 7.88 30.77 33.8 57.86 60.92 43.05 69.19 80.7 77.36 58.68 55.91 61.11 54.66 27.44 37.66 40.97 44.75 42.41 46.72 42.34 37.62 201.16 185.04 16.89 16.97