TCONS_00017382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017382
Unique NameTCONS_00017382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1018

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017382 ID=TCONS_00017382|Name=TCONS_00017382|organism=Clytia hemisphaerica|type=transcript|length=1018bp
TTCAAGttctaattttgaaattcttcatAAAGTGGCTCGATCTGTTGAAA
ATCCAAAATGTCACTGTTGGCACGTCAATCAAGTAAACTTTTGAGGTTAG
CCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTCTCTGCACTTTCG
ACAAGCTCTGCAAGATTGGacaaaaagttGTTTACACCTGGTCCACTTGG
TGTCAATCATGAAACAAAAACAGCAATGCTGAGAGATCTTGGTTCTAGAG
ATGTTGAATTTATGAACACAGTCAAATACATCAGACAGCGTGTTTTAGAG
GTTGCTGGAATTTCAACAGATACTTATACTATGGTTCCAATGCAAGGGAG
TGGTACTTTTGCTATAGAAGGTGTCATCCAGACAATGATTCCACGTCAAG
GTGGCAAGTTGTTGATTGCGACTTCTGGTTCTTATGGTCTGAGAATGGAA
CAAATTGCTAAATATTTGGATATTGAAACGACTTTGTTGAAATTCAACGA
AGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAGCTGATC
CGTCCATCACTCACGTCTCAATGGTGCACTGTGAAACCTCTTCAGGAGTT
GTCCACCCTGTTGAAGAAGTTGCCTCGATGGTAAAGAGAGTCGCCCCTAA
TGCTGTCTTTTTCGTTGATGCAATGAGCAGTTTCGGAGGCGTTCCTTTAG
AAGTTTCGAATATTGATTTTCTTGTTACATCAGCTAATAAGTGCTTGGAA
GGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAAGACAAATTAATGGA
ATGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGTTTATGAGCAATATT
TAGGATTGGAGAGTAATGGACAGTTCCGCTTCACACCACCAACGCATACT
ATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAACAAGAAGGAGGTGT
TGAAGGCCGATCAAATAGGTATGTCATAAAGCTTTATACTGCCTTGTACA
TTTTACTTTATTACTAAT
Run BLAST on NCBI

protein sequence of TCONS_00017382-protein

>TCONS_00017382-protein ID=TCONS_00017382-protein|Name=TCONS_00017382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MSLLARQSSKLLRLASTRAFQKQAIQVSALSTSSARLDKKLFTPGPLGVN
HETKTAMLRDLGSRDVEFMNTVKYIRQRVLEVAGISTDTYTMVPMQGSGT
FAIEGVIQTMIPRQGGKLLIATSGSYGLRMEQIAKYLDIETTLLKFNEDK
KVDVSVVEEALKADPSITHVSMVHCETSSGVVHPVEEVASMVKRVAPNAV
FFVDAMSSFGGVPLEVSNIDFLVTSANKCLEGVPGFGVVIARKDKLMECK
GNSRSLSLDVYEQYLGLESNGQFRFTPPTHTILGFKKAVECWEQEGGVEG
RSNRYVIKLYTALYILLYY
Run BLAST on NCBI

transcript from alignment at sc0000266:127999..134472-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017382 ID=TCONS_00017382|Name=TCONS_00017382|organism=Clytia hemisphaerica|type=transcript|length=6474bp|location=Sequence derived from alignment at sc0000266:127999..134472- (Clytia hemisphaerica)
TTCAAGTTCTAATTTTGAAATTCTTCATAAAGTGGCTCGATCTGGTAAGT
CTCAATTTATGACTTGGCTATCTCTTATTTTTGACTAATGTCCAAAAGAA
TGTTTGGTCTAAAAATACGACGTAAAAGGTTGCAACAAGTAAACAAAACA
AATAACAAATGTTTTGACCAAAACAACTCGTGACTTTTCCCTTTGTTTTG
GACTAAAAAACAACATTGTTGACGTCAAAGCTCGACTAGTCAAAATTTTA
CGTGCAAGATTTTGGTGATTGGTATTTACGTTGTCGACAATTAATTAACA
CTTGTTCTATTTTTATGGTACACACTCACGCCACACCCCTTTCTCATAGA
TAGGACCGACAAGAACGTTTTTGCTCCCTTTTGTGAAAAATACCAAAGAT
GTGTAAACCTGGGTATAACTATAAAGAAAGAAGAAGAAGAAGAAGGCTAT
TGCTCAGTTTTCACTAAATTTTTTATGCACGTTGTTTTGAAATATAAGAA
CATCAACTTTTTGAGCTTTCTGTCTTTCTTTCTTTATGTTTTTAAGTCTA
AAATGGTGGTCTTAACATGTTCTAATTTTGGACATTTTGTGAGAATTTTT
GTTCATTATCCTAAGAAATTGCACACGCTATCATGGAGTCCACAAAGCTT
AAAATGTTCTTAAAGTGTTCATCGAAGCCCATGTTCCTATACAGTTTGTT
CCCAGGGGGGGGCACTCGATTTTGAAAACGATCGTACGTTCGACCAAAAA
TCAGGTCTCTAAAATCGGACTCTTACAGTGCAGGAAAAATTTGTCAGAAA
ATCGACCCTTATAGTGCAATATTTTTCGAATTTTTTTGCCCTTTTTAGGG
CAAAATTTTTTGAAATTTCTCAAATTTTACCTCAAAATTTGGTATTTTCT
CAAATTTTACACCCTTACAGTGCACTTTTTCCCACTTAATCACAAATCAA
CCCTTACATTGCACTTTCCAAAGTCCAAAAGCCTACCCTTAAGGGCCGCA
CATCCGGTAGGTCACTTACCTGGAATGCCCCCCCCCGGGGTTTGTACTTG
TAAAAAAAACATATTTGTGTAAGTGTAAGTAAATTAAAAGTCCTGAAAAA
TTTGTCGGAATTTTGCGTTCAGAGAAAACAATCAAATTGTCACATGCTTT
CTATTGAATTGTCTTGGGCTACCTCAGGTAAGTTATGGCATGTCTCAAAA
ACCTGAAAATTACCATAATTTTTGAAGACCATTAGCCGGCAGAAAATGGG
GAAACCGATGATTTGCTACGAAGGGTACCATGATGAAGTTTCGCTGTAGG
GGTGTTACCTAATTGTTTACGCCCTTATTTTCGCGAAAAACCGCAAAAAC
TAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAAAACTTGTTT
TTTAAATAACTCCAGTTTGGCTAAAGATAGAAGCATGAAATTTGGACTGA
AGTTGCATATCATTAAAAGGATCATTTTGCAAAAAAAGATTTTGAAGTTT
TGCTGACATCAGCACTTTATTGCAAAATTTCGTATTTTGTTGATTTCTGC
TGACGAAAGCAAAATTTCAAAAAGTTTTTTTTTGCAAAATGATCCTTTTT
GCATTTGATCTTTGTGTAAAAACATTTTGACTATTGCGAGTCAAGATCAC
TAGGAAAATATATAGTTTCTTTTAGCGTGATGATGTGATCGAGGTTTTGT
ATTGTTATGCATGAAAGGGCAAACTCGAACCCATTCCCTTAGTTCACTTA
GTACAATAGCGCTCAAGATTGTAACCACGGCTATCTGTAAAATTAAAAAA
AAGTAATGCGATTAGGCCAATTAGGTACGACTACGAGATCCGTGAAAGGA
TAGGCGAAGCGAGATACCCTGCAAAATTTATGAGGGAGTGGGAGACGTTT
ATGACATATTCATTATATTTTGATAAAACAAAGACAATAATTACAGTTTT
GTAAAAATCGGTAAAAACCGCTCTCATCCATAAATTTTGCAGGGTGGTAT
CTCGCGTGTGAAACTTGAAAGGGCAAAAATTTGATTGAGATGTGTGATGT
GAATGATGATGCATGTGATTTGGGTTTGTGAGTGAACAATCATGTTCATG
GAATACTTTTTCAGAGTCATATAATATAAAGTGAACTAAAAAAAGGGCTG
GACGCTCCAGTTTTGGACCCCCGCCCTATATTTCCACCCACTGGCGCGCA
CGCCATTCCATCAANAAGTGAACTAAAAAAAGGGCTGGGCGCTCGAGTTT
TGGACCCCCGCCCTATATTTCCACCCACTGGCGCGCACGCCATTCCGTCA
AAAAGTGTTTGATCAGCCGCACCAATATTCAGTTTATAGAAGACGTGTTC
GTAAACACAACACGTGCTCATTAAAAGATGGTTGATTGAAAATGGTGAAA
AATGGGGGAGTTTCTTAATAGTGTTTACTAGTGTTTGTTTTAAACTTCCT
ATTGTCTAGAGATTGTTGTGTAAATCAGAAAGAATATAGAGTATGGAAGA
CGTTGTTGAGATGTGGTCATGGGAGCTCATTGCTGCTCATATTTGAAGTA
GCAGAGGGGGATTTTGATCAAAATTTCTAGGTCAGAATGATATAAATTTT
GGCCCCCTCTCCCGCCTGCCCCTGCCTAAGCCTACCTGGTGGAGATCCTT
GCTATGATTTTTGATTCATATACTGTTAGCGAAATGAATAGCATAATCAG
GGCTGAGAATTTAAAAGTTTCAAATTTCCTGGCCAAACAACGCACGTTGA
TAAAGAATCTACCGTAGCTTTGTGTAATGTCAACAGTTCACATATACCTT
CAGTAGTTGTCTAATTCTAAATGGTCAACTATCAAAACTATCAACTATCT
GGTCTGCAAAGTAGTTACAGGTAGTTAGAGTGTTTTTTTAAACAGTTTAT
TTCAGAAGGTTTTATCTATAATAAACATATTAAAGACCGGATATAGTTGC
CACACTCACTTCCAACAAAAACAAAAGAACAAGAACAAAAATAAGGGATG
GTTTTTTTTTTAGCAAAAATTTTTTCTCTTTTGATCCAAAAATACCTGAG
AGACTAACAAAATCATTCACATGGCAAATCTAAAATATTAAAATATATAT
CTGACAAAGACAAAGCACACTCTTGATCAAACTGATGGGAAAAATTTATC
TTAGGGGCTGAATAGACCTTTTTTCAAAGAGGACGTCCTGTTGAATAGAC
CTTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCAGCCATAA
AAACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTAATAA
TTATGCATGGTTTTATCATTTTTTTCTGCTGGACTACATAATTATTCAAC
AGGGTGGCCTCTTTGAAAAAAGGTCTATAATTATGTAGTCCAGCCATAAA
AACAATGATAGAGCCATGCATAATTACTTCTTACGTCAAGGTGACCAAGG
CATGTTCATTAACCATCTAAATACATACTTTCCTTTAAACAGTCTTTCAT
GTAGATTCTGGAATGCTCACTGTAATAATATTTACGAACAAGACATGTCA
CTCTCATCTTTCACTGATAGATTGAAGAATAAATTCTTGCAATAAACAAC
TAATTTCTGATACGAAATCAAGTCGTTTGTATTCCCTTTACTTTTTCTCT
TGAGGAATCATACATACCATGTAAATATCTGTAAATAGTTCTTCCTCTGT
TTCTCTTTGTTCAATAAATTTCATTTACTTACATTCTTGATGCCAATAGG
CACATTTAAAAGCTGTCTTTGCCACTATATATTTTATGTTAAGTATATTT
ATTTTTCTTAGCATAGTTTATGCTAATACTTACATTTTACTTATATTTTA
TTTAGAAGTATATTATTTAGAACCCACTATATTTATTTTAACTATTTAGC
TTTTAGGAACAACATTATCCTTTGTATCACCGCTAAGGTGATATTTTTTT
AGATATTCTATTTTTTAAATGTACATAGAACCAAAGCCCAAAAGGGCTGA
CTTGTGTACATAGACATATTTCGGAAACTATTATTAGAAAAGAAATCAAA
TCAAATCAAAAATCATTACTGTATCATGCATATTGTAATAATTATGCGTG
GTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGC
CTCTTTGAAAAAAGGTCTATTTTGCTCATTCAGTTCCAAAAATACAGTCA
AAATTTGGTCTGTCAGGATCTAAACTTTTCGTGGTACAGGGCCTATATTT
CCAAACCCCATGAAATGCTCTTTATCTTCTATATACCTCTAGAATTCTCT
TGTCCTTCTATAGCCTAAAATGTAAACTTGCTGTAAAAAGAACAATCCAT
AGTAAACAATAAACTAAATGTCATGAGCCTGCTTTGCTGCTACATTTTCA
TAGTATTATTTCTGCTTTTTATTTGTAAATTCTTGTCATTTTTGTAATTA
TACTTCCTCTTTCAAAACAACAAATTCTGACAGGTCTTGTGTAATGTTTA
CATTAGATTTAAAATTTCTGTAAACTTTGTTTTTGAATTGCATCATCAAT
CATATCTCATATTTCAGTCTGTTGTGTTCTTATCACACAATATCATAAGT
TCGACTTATTCTTAGAGAGCCTTTTTTTAGGTAAAGAGTCCAGATGAAAT
CATTATTTAGAAGGCTCTTAAAATATATGACCTAAAAACTAGAAGTTGTA
ACAAACACTTGAAACACTACAATATTAGATTCCATTTGCTTTAATTGTGT
ATCTTAACCCTATATGACTTTGTATCCCTAATGAGCATCCCTTGGATTTC
ATCCTATGCAAAAAATGAAAATGAAAGTTCTTAAAAAGAAAATCATAAAA
AATAGACCCCTGCTCTTTTTCGTTATAATTATATTAAGAATAATCAAGCC
AAAAGGGATAAAATGAACGGAATAGGTGCCTCTGGGATAAGATCATAGGT
TCTATTCTCAATGCCAATGAAAGAGATTCGAAGGAATTCCATGGAAACCC
ATTTGTTTTGTGACATCAGGTTGTATCTGGGAAAGTTCTGAACTAAAAAG
CAGCACCAACTATTTGCTAGTGTTAGCAAAATAATTACAGATTCGTTGTA
TTTCAGTTGAAAATCCAAAATGTCACTGTTGGCACGTCAATCAAGTAAAC
TTTTGAGGTTAGCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTC
TCTGCACTTTCGACAAGCTCTGCAAGATTGGGTGAGTAATCTTATTCACT
TTACCTTGTGTTAACTTCTAAATATTTTTTACCTAGTTTTTTGCTGTATA
TTTATAACTCTTTGATTCAGAATCAGTCTATTTATAAATTTCTGTTCTGT
ATCCATGCTTTCATTTTTGGTAATCAGCAATAATCATTTTTAGACAAAAA
GTTGTTTACACCTGGTCCACTTGGTGTCAATCATGAAACAAAAACAGCAA
TGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTATGAACACAGTCAAA
TACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATTTCAACAGATACTTA
TACTATGGTTCCAATGCAAGGGAGTGGTACTTTTGCTATAGAAGGTGTCA
TCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGTTGATTGCGACTTCT
GGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAATATTTGGATATTGA
AACGGTAAAAGTCATGTTTTAAAGAAAGAGAAAAAGAAAAACCTTTTCAG
CTTGAAGAGCTCTCTTGATAAAATATCAATACTCTAATGCATTGAAACCA
GGCTAAACGTAACCTATAATTTGTAAAAAATCACGGAAGAAATACTTTTG
CATCTCTCAAATATTAATATTGTTGACTGTTATTGTTGCTTTGTTTTTCT
TTTTTTGTCATCACAATATTTTGTTTCTCTATTCAGACTTTGTTGAAATT
CAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAG
CTGATCCGTCCATCACTCACGTCTCAATGGTGCACTGTGAAACCTCTTCA
GGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATGGTAAAGAGAGTCGC
CCCTAATGCTGTCTTTTTCGTTGATGCAATGAGCAGTTTCGGAGGCGTTC
CTTTAGAAGTTTCGAATATTGATTTTCTTGTTACATCAGCTAATAAGTGC
TTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAAGACAAATT
AATGGAATGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGTTTATGAGC
AATATTTAGGATTGGAGAGTAATGGACAGTTCCGCTTCACACCACCAACG
CATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAACAAGAAGG
AGGTGTTGAAGGCCGATCAAATAGGTATGTCATAAAGCTTTATACTGCCT
TGTACATTTTACTTTATTACTAAT

Coding sequence (CDS) from alignment at sc0000266:127999..134472-

>TCONS_00017382 ID=TCONS_00017382|Name=TCONS_00017382|organism=Clytia hemisphaerica|type=CDS|length=2880bp|location=Sequence derived from alignment at sc0000266:127999..134472- (Clytia hemisphaerica)
ACTTTGTTGAAATTCAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGA
AGAGGCTTTGAAAGCTGATCCGTCCATCACTCACGTCTCAATGGTGCACT
GTGAAACCTCTTCAGGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATG
GTAAAGAGAGTCGCCCCTAATGCTGTCTTTTTCGTTGATGCAATGAGCAG
TTTCGGAGGCGTTCCTTTAGAAGTTTCGAATATTGATTTTCTTGTTACAT
CAGCTAATAAGTGCTTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCA
CGAAAAGACAAATTAATGGAATGTAAAGGAAATTCGAGAAGTTTGAGTTT
GGATGTTTATGAGCAATATTTAGGATTGGAGAGTAATGGACAGTTCCGCT
TCACACCACCAACGCATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGT
TGGGAACAAGAAGGAGGTGTTGAAGGCCGATCAAATAGGTATGTCATAAA
GCTTTATACTGCCTTGTACATTTTACTTTATTACTAAACAAAAAGTTGTT
TACACCTGGTCCACTTGGTGTCAATCATGAAACAAAAACAGCAATGCTGA
GAGATCTTGGTTCTAGAGATGTTGAATTTATGAACACAGTCAAATACATC
AGACAGCGTGTTTTAGAGGTTGCTGGAATTTCAACAGATACTTATACTAT
GGTTCCAATGCAAGGGAGTGGTACTTTTGCTATAGAAGGTGTCATCCAGA
CAATGATTCCACGTCAAGGTGGCAAGTTGTTGATTGCGACTTCTGGTTCT
TATGGTCTGAGAATGGAACAAATTGCTAAATATTTGGATATTGAAACGAT
GTCACTGTTGGCACGTCAATCAAGTAAACTTTTGAGGTTAGCCTCAACCC
GAGCTTTTCAAAAGCAAGCAATCCAAGTCTCTGCACTTTCGACAAGCTCT
GCAAGATTGGACTTTGTTGAAATTCAACGAAGATAAGAAAGTGGACGTAT
CAGTGGTAGAAGAGGCTTTGAAAGCTGATCCGTCCATCACTCACGTCTCA
ATGGTGCACTGTGAAACCTCTTCAGGAGTTGTCCACCCTGTTGAAGAAGT
TGCCTCGATGGTAAAGAGAGTCGCCCCTAATGCTGTCTTTTTCGTTGATG
CAATGAGCAGTTTCGGAGGCGTTCCTTTAGAAGTTTCGAATATTGATTTT
CTTGTTACATCAGCTAATAAGTGCTTGGAAGGTGTCCCTGGGTTTGGTGT
CGTCATTGCACGAAAAGACAAATTAATGGAATGTAAAGGAAATTCGAGAA
GTTTGAGTTTGGATGTTTATGAGCAATATTTAGGATTGGAGAGTAATGGA
CAGTTCCGCTTCACACCACCAACGCATACTATTTTGGGGTTCAAGAAAGC
TGTTGAATGTTGGGAACAAGAAGGAGGTGTTGAAGGCCGATCAAATAGGT
ATGTCATAAAGCTTTATACTGCCTTGTACATTTTACTTTATTACTAAACA
AAAAGTTGTTTACACCTGGTCCACTTGGTGTCAATCATGAAACAAAAACA
GCAATGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTATGAACACAGT
CAAATACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATTTCAACAGATA
CTTATACTATGGTTCCAATGCAAGGGAGTGGTACTTTTGCTATAGAAGGT
GTCATCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGTTGATTGCGAC
TTCTGGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAATATTTGGATA
TTGAAACGATGTCACTGTTGGCACGTCAATCAAGTAAACTTTTGAGGTTA
GCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTCTCTGCACTTTC
GACAAGCTCTGCAAGATTGGACTTTGTTGAAATTCAACGAAGATAAGAAA
GTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAGCTGATCCGTCCATCAC
TCACGTCTCAATGGTGCACTGTGAAACCTCTTCAGGAGTTGTCCACCCTG
TTGAAGAAGTTGCCTCGATGGTAAAGAGAGTCGCCCCTAATGCTGTCTTT
TTCGTTGATGCAATGAGCAGTTTCGGAGGCGTTCCTTTAGAAGTTTCGAA
TATTGATTTTCTTGTTACATCAGCTAATAAGTGCTTGGAAGGTGTCCCTG
GGTTTGGTGTCGTCATTGCACGAAAAGACAAATTAATGGAATGTAAAGGA
AATTCGAGAAGTTTGAGTTTGGATGTTTATGAGCAATATTTAGGATTGGA
GAGTAATGGACAGTTCCGCTTCACACCACCAACGCATACTATTTTGGGGT
TCAAGAAAGCTGTTGAATGTTGGGAACAAGAAGGAGGTGTTGAAGGCCGA
TCAAATAGGTATGTCATAAAGCTTTATACTGCCTTGTACATTTTACTTTA
TTACTAAACAAAAAGTTGTTTACACCTGGTCCACTTGGTGTCAATCATGA
AACAAAAACAGCAATGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTA
TGAACACAGTCAAATACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATT
TCAACAGATACTTATACTATGGTTCCAATGCAAGGGAGTGGTACTTTTGC
TATAGAAGGTGTCATCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGT
TGATTGCGACTTCTGGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAA
TATTTGGATATTGAAACGATGTCACTGTTGGCACGTCAATCAAGTAAACT
TTTGAGGTTAGCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTCT
CTGCACTTTCGACAAGCTCTGCAAGATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009730XLOC_009730Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017382-proteinTCONS_00017382-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017382-exon-sc0000266-1575043694:134429..134472TCONS_00017382-exon-sc0000266-1575043694:134429..134472Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1575043694:129242..129366TCONS_00017382-exon-sc0000266-1575043694:129242..129366Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1575043694:128769..129079TCONS_00017382-exon-sc0000266-1575043694:128769..129079Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1575043694:127999..128536TCONS_00017382-exon-sc0000266-1575043694:127999..128536Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1510915933:134429..134472TCONS_00017382-exon-sc0000266-1510915933:134429..134472Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1510915933:129242..129366TCONS_00017382-exon-sc0000266-1510915933:129242..129366Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1510915933:128769..129079TCONS_00017382-exon-sc0000266-1510915933:128769..129079Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1510915933:127999..128536TCONS_00017382-exon-sc0000266-1510915933:127999..128536Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1491911889:134429..134472TCONS_00017382-exon-sc0000266-1491911889:134429..134472Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1491911889:129242..129366TCONS_00017382-exon-sc0000266-1491911889:129242..129366Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1491911889:128769..129079TCONS_00017382-exon-sc0000266-1491911889:128769..129079Clytia hemisphaericaexon
TCONS_00017382-exon-sc0000266-1491911889:127999..128536TCONS_00017382-exon-sc0000266-1491911889:127999..128536Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:127999..134472 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.0431	78.3512	92.0801	78.0505	9.33676	7.88307	30.7703	33.8007	57.8587	60.9206	43.0512	69.1866	80.7001	77.3567	58.681	55.9112	61.1052	54.6554	27.4385	37.6602	40.9726	44.7452	42.4103	46.7233	42.3388	37.6178	201.16	185.039	16.8853	16.9674
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR000192Aminotrans_V_dom
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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