XLOC_009964 (gene) - C. hemisphaerica

Overview


Name	XLOC_009964
Unique Name	XLOC_009964
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000276:4101..14831+

gene from alignment at sc0000276:4101..14831+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_009964 ID=XLOC_009964|Name=XLOC_009964|organism=Clytia hemisphaerica|type=gene|length=10731bp|location=Sequence derived from alignment at sc0000276:4101..14831+ (Clytia hemisphaerica)
tggcggtcGAAAAACACTGAGAAATCAGAAAATCGCAGTTTTTTATGATG
GTATTTTGGTTTGGTAGAGATATCTTGAGTCTATTCTGATTCAATACATC
TACAGATACAGAGGTaaataagtttttcaaaaaagccactgaatttttct
ttcaagtagtgttttttttaatttttagagtaaaattcttaaaaattctt
ttctttCTCAATCATGTATGTTTTCGGCCGGGGTTTTGTCAAAGTCCTCA
AATGGCCAAGTGGCCTGAAAAACTTTGTGCTGTACCCCATGGGGTTTTCA
TGCAACCACTACCTTgaaattgggtaacttgcattagTTGAGGGAAACTT
GTGCATCATAGGCATAGGCGGCATagccatcaaaacaaataaaagagtcc
cctgcccagttggcaaCCGGTCTAGTTGGCAACCaaacgtctttgaaccc
agaaaagtcatacaaaaaaaaacctctggagaatttctattggtagttat
ctgccttgacctatttcccgtatatactgtgtaaaaaaagttttagaaaa
aaacgagtagaatccgaaagatccaactttgcagaagcacacgaaaaagc
tggatttttcaaaaaaaataaaaaatggctacctgtacacgtaagaaaaa
acgcttcaactcccactccaaaaaatacttgtccaaaagTATGAGTATGT
TAGAAAGAATTTCTGTAAAAGTCAGCTCGATACAGTTTCCCNTCCAAAAG
TATGAGTATGTTAGAAAGAATTTCTGTAAAAGTCAGCTCGATACAGTTTC
CCTCgtgtgaaatattgataaaaaagttgatgcaattAGCTTCGATATTT
GAcatccagtctgcgaccgaccaaactcaaaaaaaatgaaaaagaatact
ccacattgcaatcaaaacattctAGACGCAActagagaaaaaaagaagac
tttacatTACGATCAAAACTTGACAGCATAGCTCCAATGCAAAGTTTCTA
GCTCTGGATTGAAATAACAAGGGAAACTGGTATATTAAACTCCGGGTAga
cataaaaaaatttttttcaaatgaagactctccatagactgccactttca
caacaaaacaaaaacaaactttagaaaaaaatggcaacttgaagaaaaat
tctgaaaaacatgccgaagggaaatgtaagtaagctattttaaaacaaaa
gaacgagtgtaaataaatttaatacgGGAAGGCTTATGAGTTTATGATCA
ATTAATATGACCTTTTACCTGcagtagagcactgattttctctttCTTAA
GATCGGTTGCAGACTAGTACgtcggtcgggaactgggcactagtaccgct
cgcttcgaaagttttttattctaagaagagcgcctcaaataaaaattttt
tcaaaaaagtaaaaagttagtgaaaaatttgaatcaaaaaatttcggtcg
ccaactgggcagggtactcttgaaggcttcttcataaagacgaaagacat
gtatctatttttcggatccggtatgcAGGAATAGTGTCATGACCTGCAGG
caacctggtagggttgggtatgggtgtggtttgggtgtggttacgtatca
gactGGCTAGGAAtcgggttattatcagttagggttagggttgaaattga
ttttctcttaatacagtctggtctgcagtttgtacaatataaatagccgt
cagaagcgCTACCCTGGCATGAATctgtggcgcagtggataaggcaatgg
gtttcaaaacatcggaactttgcatttagtgggttcgaatcccaccggtg
gcgatctgtcggtaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTAAAGGTC
TTAACAGAAGGTAGATCTCTTATATTCTTAGAATCTCATACTTGCCGCAT
GAGTAGTGCATAACAATCCttgttattcaaaaaacttaaCATCCTCATCA
TTTTATATATACAAAAGTTCTCTTTTTGATTTGGTCCTATTAGACAAGGG
CGGTCCTTACAAATTCGAAATAGCATATTTGtcagattgttttgttttca
cccatcccgtTAGAGCTTCAGTGTGGTGggaagaaaacaatcacaatctg
atctcaggttaaaaAGTACCGTGAGATCAGATAACTTGCATAAAAGGCAt
tgtggtatagtggacatcaaccttgatttCTGTACAGGCGGCCAAGGTtt
gattcccactcacaacggttcacttggcaagtaaaCAAACCTTAGCCCGG
GTCGACCCAtcccatgtgaggggaattgggtagtcagttcaaggtgctga
cggtgatgcttactcaaagcatctatagttgtgAGAATGGGCTccagagc
ctcctgtaactcaaccataatagataGATATATCAGTGGATGCTAACTTG
AATAGCTCTCAAATGAATggcctggctggtcattaaaatacaaattcaaa
tcaaaacaaacctgacaattagtcacactaggaaatcaagctttcagaaa
aaataacatcagtcatctacaggattcatttgcaacaacaaggatgagag
ttacctgaatcaagttagCAAGACAAtttattaaaacttgaaagtttgaa
acaaaataaaacgtgcagcagccaaaatccaccaaccaaaatttgtcatt
caattcccaagacagcgcttcaatttttaaggccttgtttatacgctaaa
gtaaaaacaactctgcacatgtaaatgggtcaatgtttgaggtctggcaa
aatttccaggagataGCTTATCCGGCAGTGTGCGGATCTACGTGGGTTTC
GTCTCCCCCATAGATCTtattcttgggaagttgatcttcaaattagttct
caaggttgggttggctcaaattttttcatctatggctcaaattttaggca
atttctcatagtttttgagaatgttaattACATTAAAAAGTGCCGGGttg
ttttttcatgaatccctttataAGTTTTGCCAGGTTTTACGGTGCatatt
tttgcttgagagtcaaaaggtaaacgatatagcgctttcgcagcattaat
ctttgatatgtaTTTCggtgggacgctagtgtgacgaACTgcctgattta
caaaatttacggATTGTAAAATGTATAATCTCCTAAACATAAAAGTGATA
TCATGCATTATGTTGGGTATTCCTAAAAGGTAGGGTACCCCAATTGGGCT
GCTACTATGTATCGAGAATGGGCCTTCGGGTCTGATGTTACTTAAAAACC
CatttaatttacagaccagaaaaaccGGAAATTTGTGGAGGAAAGCCAGG
AGTTATGATTctaaagaatatttcaattaaTATTGCACGATGCAAAAGAT
ATTCAAAGATACATTAATTACCATGTGATCAAAGCATAATGGTGTATGAA
ATAGAGCTTAGTGACAAGGGGTTTATATATGCCTAATACATAATATGGGT
AGCtacttcaaaaatgataataACTCGACCCATTGAAGTAAGTCATTATG
TTATTGTGTACATAATAGATTAAAAgacaaaagattgaaaatatATAAGA
GTCTGATGAAAGatcaaaatgatcaatttgTAAAGTGGCAGCTTTTAACA
ACAAATTTAGAGACTTTTAAATAGAAATAAGataaagaataacaaaatta
NAgcgcttcaatttttaaggccttgtttatacgctaaagtaaaaacaact
ctgcacatgtaaatgggtcaatgtttgaggtctggcaaaatttccaggag
ataGCTTATCCGGCAGTGTGCGGATCTACGTGGGTTTCGTCTCCCCCATA
GATCTtattcttgggaagttgatcttcaaattagttctcaaggttgggtt
ggctcaaattttttcatctatggctcaaattttaggcaatttctcatagt
ttttgagaatgttaattACATTAAAAAGTGCCGGGttgttttttcatgaa
tccctttataAGTTTTGCCAGGTTTTACGGTGCatatttttgcttgagag
tcaaaaggtaaacgatatagcgcttttgcagcattaatctttgatatgta
TTTCggtgggacgctagtgtgacgaACTgcctgatttacaaaatttacgg
ATTGTAAAATGTATAATCTCCTAAACATAAAAGTGATATCATGCATTATG
TTGGGTATTCCTAAAAGGTAGGGTACCCCAATTGGGCTGCTACTATGTAT
CGAGAATGGGCCTTCGGGTCTGATGTTACTTAAAAACCCatttaatttac
agaccagaaaaaccGGAAATTTGTGGAGGAAAGCCAGGAGTTATGACTct
aaagaatatttcaattaaTATTGCACGATGCAAAAGATATTCAAAGATAC
ATTAATTACCATGTGATCAAAGCATAATGGTGTATGAAATAGAGCTTAGT
GACAAGGGGTTTATATATGCCTAATACATAATATGGGTAGCtacttcaaa
aatgataataACTCGACCCATTGAAGTAAGTCATTATGTTATTGTGTACA
TAATAGATTAAAAGACAAAAGATTGAAAAGATATAAGAGTCTGATGAAAG
ATCAAATGATCAATTTGTAAACTGGCAGCTTTTAACAACAAATTTAGAGA
CTTTTAAATAGAAATAAGataaagaataacaaaatttaaaaaaggaaatg
atcgaaaaatattttcttaattttaccaAACGAATTTGTTCTgcgttttt
cagaaattttattcTGGTCTTTATATTTCCAAGTAAGAGAAGAAGGAAGA
CATCCATGGCACCtaaacattataaaaaaaagtagatTTATAGACTATTG
CAACTCAAGTTTTAAAGCAATCTTAAATCTGTTTTTTGTAAAGGATCAAT
CGAAGGTTTTAGTATCATTCATCACAAAATCAAGCATCTGTTTATAAAAT
TTAGGACAAAAAGTGGTACCCCAATAAGCCTAATTGGGGCCCGAATTGGG
GTGCCCTACTTTTTACGAACACCCCATTATGTTTTTTAATatcattatta
aatttttctcctcGTTCTTCCGTCAGTGAATTTTAATCattgatttattt
tattttatttctatcAAAGTTAAATACAAAGAAATAAATGATGAATTTGT
TGTTTTAAATGGGTCTTGTGATGTTGAAATGCCAAGAGCAGAAAATACTT
CTGCAACATCAATCAACTCTAAAAACACTTCAGTGAGTGCCAGTGCTGTT
CATCCTACTGAATTACAGGCTAGTGAAGAGAAATCCAGTCTACAAAATGA
ACGTGCAGTTGATCATTTATTCACAACCACCAATCGTTGTAAAGCATCTC
TCTTCATCAATACAGGAGAAAATCGAACTATCCACGTGGTCCATTATGCC
CAACGAGAGCAAGACTTGTACACACAATCAACATTCTCCAAAACAGAGGA
TGAAAGTTATGAATCTAAAGTTATGTTATTCTTTATTCACGGAGTTGGTG
GAACTATANTTTATTTCAATCAAAGTTAAATACACAAAGAAATAAATCAT
GAATTTGTTGTTTTAAATGGGTCATGTGATGTGGAAATGCCAAGAGCAGA
AAATACTCCTGCAACATCAATCAACTCCAAAAACACTTCAGTGAGTGCCA
GTGCTGTTCATCCTACTTGATTACAGGCTAGTTAAGAGAAATCCAGTCTA
CAAAATGAACGTGCAGTTGATCATTTATTCACATCCACCAATCGCTGCAA
AGCATCTCTCTTCATCAATACAGGAGAAAATCGAACTATCCACGTGGTAC
ATTATGCCCAACGAGAGCAAGACTTGTATACACAATCAACAGAGGATGAA
AGTTATGAATCTAAAGTTATGTTATTCTTTATTCACGAAGTTGGTGGAAC
TATACAAATGTGGGAACCTCAGATACATTATTTCCTTACTCTTGGTTATG
AAATTATAGCATTAGATTTGTTGGGGCATGGTCAAAGTGGGAAACCACGT
GTATATAATGCATATCAATTCACAGAGCTGGCCTCTGatgtaatgtttat
ttttgatcGATTTAGTAAACGTAGGAACGTTTTGATTGGACACTCTTATG
GGAGTTCATTTTGCACAATGTTATCGAAAGAACGAGCACGTAAAGTTTGT
AAAACTGTTTTAATTTCTGGTGGAGGACCAACATTATTGATGCCAGATCG
TTGTAGTGCTTTTTGTTTACCATTACCTTTCTTTGTTTGTATAAGAAAAA
GTGTGGTCAAGATGTTTCAAAGGTAAAACCTTATCTTTTTTCgtattttg
atgtttgatgaAAACAGGTTTCTGGATTTCAACCATGGAAAATGTTCGAT
AACTATTTCAAAAGAAGGTTTGCATATGTACTTTAATCCAAAATAATCAC
TGATAAATTATACTAGAAAATCTATTGATACCTCGTCTTATTCTTGTGGA
AAGTTTTTCTagtaaacttttcatttttatttttcttcccaAGGGCTTAG
AATATATAAATTAGATTGGATCATTTTACAAATTAATTGTGTTTAAATTG
AACGTTCTTTAAAACGGTAAACTATTTACTCCATTTTTCAGGATGGCATT
TCATgaagaaacaagtgatactgtTCGTCAAAAGATTTCAACTTTTGAGA
TTTCATCTTTCGCTCTTAAAGCCATCATGCAAGGACAGGTAAAGTGTGAA
GCCAATACAAACGGATAAATTATGTTGAACCTAGGTAACAGCAGTAACAG
TGTTGTGAAAGACAGATAAGTTATCATTTAAAAGATTTCTGcaggagtaa
ttagttatttaTAAGACCGTCGCGTTCTTTCAAACCTCTTGAAGCCTCAT
AGAAAGTACAGGGAGGTGATGAAATTCAGctaaaatctaagaaaaaattg
atgataatttgagaaaaaaataccgATACAGATGGGGTCTCACCCGGTGG
AACCAGcgaaccaaaactcgatggggattaatatttgaattccattgttt
tcaagccagataattcagtagggatggaaaatgtatttggaaaataattt
gcagtgaggattcgtttatctgattattttcagcggggaaaAAATGAGAG
TAGAATTTCCCACGAGGGACAATTTTTTGCCaatattttccagtgggaag
ggtttccAGTGAATCTGTGAGAAGAGAGTGTACACACAAGCTACACAAGC
TCCATTCAAAAGCAATAAGTAAAGAGAGTCTTCATAATAAAAAATTGTCT
TTATATACCACGTGGAGGGAGTTTTATTGCAACCAATTTCCAACTTTCCC
GATGATTCTGTGACCAAAAAGATGAAGGGAAAGAGGAAATTTCCTCAAGC
GAGACTGAAAGTTTGGAAAAACCTAAGAAAAAGATTAACGATTATTTAAT
AAATACAGATGTACAAGTGTATAACTAATGCAATATAAATTAACAGCCTT
GGACTGAATGatattttgtttatgttttttgtttttgtttccaGAATTGG
CACGAGTCAACAGAAGAATATCATGCTAGTTTGAATCTACCTGTACTGTT
GGTTTATGGGAAAGGTGACCAGTTTGTTACTCTGGGTGAAGAACAATGGA
TGCAAGAGGTAATTATCCCATAATGCATTTTGTTCTTTACTTCGTTccca
tagtgtgcagaggggtctgaaccccccattaatatttcatccccccctat
aaaggtatcccccctatttttaaatttttttgatcccGCACCATTTACAG
GGGTCCGAGCCCCTTCGAACACAACATTCAAACGTTTTTGTTCAAACANG
AGCCCCCAGCATATAATTTGTACTCCCAGTATTGGGGaagaattttgatg
aatgaaatatatttttcagtgtGAATTCGTACCAATAGTCAATGAACTTG
AAAAGACTAGCAAATAAACAGTAAACTAataattttttaaccaaaaagtt
actatcccccctatttttatttgatcccccccctataagctcaaaccccc
cattttaactggaaaattgcccatccccccctataaagccttccttgaaa
actcggatcccccccccttaaaaaagggggggggttcatactaTGGTTCC
ATACTTGAAATTTTTACTACATGTCTCAATCCCTATCTAGATTAATTGGA
AAATGACAagccaaaaaaattacagtactTTTAAAAGGGATTTTAAATGT
CCTTTAAGTCTCCCACTTTCGGATATGGGTTAGCAACCACGGGCTGTCAg
tataattttaataaaaataaaaacgaacCAAACTATTTTTACAGACGATA
TTTGGTGCAGACTTGGAGGTTATCGAAGGCGCTGGTCACATGGTCATGTT
AGAAAAACCTACACAGTATgtcatttttctttatatacGTTCTTTATTTA
ACGGAGATGGATCTAGGCAATAGGTATATTTGAAGGCTAGAGTCGCATCT
CCTATGTaggatttgatttgattggtaaAAACCCTGATATACCTTCTTCC
TCAGTACACCAGGATCTAACCAAATCAAAAACTAACCATCTCCGCTGCAG
TAAAAAAAAGCCTACTTAggtacataaactcgctaatacacgtttttttt
taagaaacacacttttaagaaacatcaggctcagaatgcctaaaaactaa
gaaatttaagaaacatGTTGAGgttgagaatgagaaaataacatttttta
accttCTAATCAAAacacatgttttttttctttgcatgaaaataggctga
ttatgtcaaaaagtttagaaacatgtaagaaacatttaagactcaaaagg
ccgatttcttaagaaatattgaggctgcttggtaaagctagtttcttaaa
aataaaacgtgtagCCTCGACCAAGGCTGATTTTAGTTTCTCATTTCAGT
GGCACAAAAGTCTATTGTAATGAGTTTTCTTATATTCTTCCGTTTAGCGT
CAATGATGCTATTCATAGTTTTTTAAATCGCGATTCATCCACATGGTCAT
CCCACCCTGCTCCTGAAGAAAGACCGCCAGGGCGTGGGGCGGCTTTTCAA
AGTCCACAATTGCTGGAGAATTCTGAAGCATCGGTTCGTTCTAATGGTGG
ACGACTTTCACGTTTATCGCGCACTTCAATACGCAGTAAGACTATGATGT
GAGAAAAGGTGGAAGATTTTAACGTTGGAACGGGATAGTGCAAGGGCTCt
ctcttgttaatttttcgaaaattttctaaccaccggaccttattaggacc
cctcgtttattaatttttaagaatattttcagttagcAAGAAGAAGTcgc
cttattttgctccaaaaagcctgatcttagc

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00017775	TCONS_00017775	Clytia hemisphaerica	transcript
TCONS_00017776	TCONS_00017776	Clytia hemisphaerica	transcript
TCONS_00017777	TCONS_00017777	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00017777-protein	TCONS_00017777-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000276	supercontig	sc0000276:4101..14831 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.82	4.54	4.4	5.49	27.26	14.6	13.78	12.55	18.7	12.98	15.18	21.49	3.94	3.59	1.38	1.42	2.13	1.61	5.21	9.34	2.57	2.91	6.42	5.51	6.13	11.19	5.27	5.44	4.75	3.68

You are here

XLOC_009964 (gene) - C. hemisphaerica