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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017777 ID=TCONS_00017777|Name=TCONS_00017777|organism=Clytia hemisphaerica|type=transcript|length=1487bp
GTTTTTTATGATGGTATTTTGGTTTGGTAGAGATATCTTGAGTCTATTCT
GATTCAATACATCTACAGATACAGAGTTAAATACAAAGAAATAAATGATG
AATTTGTTGTTTTAAATGGGTCTTGTGATGTTGAAATGCCAAGAGCAGAA
AATACTTCTGCAACATCAATCAACTCCAAAAACACTTCAGTGAGTGCCAG
TGCTGTTCATCCTACTTGATTACAGGCTAGTTAAGAGAAATCCAGTCTAC
AAAATGAACGTGCAGTTGATCATTTATTCACATCCACCAATCGCTGCAAA
GCATCTCTCTTCATCAATACAGGAGAAAATCGAACTATCCACGTGGTACA
TTATGCCCAACGAGAGCAAGACTTGTATACACAATCAACAGAGGATGAAA
GTTATGAATCTAAAGTTATGTTATTCTTTATTCACGAAGTTGGTGGAACT
ATACAAATGTGGGAACCTCAGATACATTATTTCCTTACTCTTGGTTATGA
AATTATAGCATTAGATTTGTTGGGGCATGGTCAAAGTGGGAAACCACGTG
TATATAATGCATATCAATTCACAGAGCTGGCCTCTGatgtaatgtttatt
tttgatcGATTTAGTAAACGTAGGAACGTTTTGATTGGACACTCTTATGG
GAGTTCATTTTGCACAATGTTATCGAAAGAACGAGCACGTAAAGTTTGTA
AAACTGTTTTAATTTCTGGTGGAGGACCAACATTATTGATGCCAGATCGT
TGTAGTGCTTTTTGTTTACCATTACCTTTCTTTGTTTGTATAAGAAAAAG
TGTGGTCAAGATGTTTCAAAGGATGGCATTTCATgaagaaacaagtgata
ctgtTCGTCAAAAGATTTCAACTTTTGAGATTTCATCTTTCGCTCTTAAA
GCCATCATGCAAGGACAGAATTGGCACGAGTCAACAGAAGAATATCATGC
TAGTTTGAATCTACCTGTACTGTTGGTTTATGGGAAAGGTGACCAGTTTG
TTACTCTGGGTGAAGAACAATGGATGCAAGAGACGATATTTGGTGCAGAC
TTGGAGGTTATCGAAGGCGCTGGTCACATGGTCATGTTAGAAAAACCTAC
ACACGTCAATGATGCTATTCATAGTTTTTTAAATCGCGATTCATCCACAT
GGTCATCCCACCCTGCTCCTGAAGAAAGACCGCCAGGGCGTGGGGCGGCT
TTTCAAAGTCCACAATTGCTGGAGAATTCTGAAGCATCGGTTCGTTCTAA
TGGTGGACGACTTTCACGTTTATCGCGCACTTCAATACGCAGTAAGACTA
TGATGTGAGAAAAGGTGGAAGATTTTAACGTTGGAACGGGATAGTGCAAG
GGCTCtctcttgttaatttttcgaaaattttctaaccaccggaccttatt
aggacccctcgtttattaatttttaagaatattttcagttagcAAGAAGA
AGTcgccttattttgctccaaaaagcctgatcttagc Run BLAST on NCBI protein sequence of TCONS_00017777-protein >TCONS_00017777-protein ID=TCONS_00017777-protein|Name=TCONS_00017777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MLFFIHEVGGTIQMWEPQIHYFLTLGYEIIALDLLGHGQSGKPRVYNAYQ
FTELASDVMFIFDRFSKRRNVLIGHSYGSSFCTMLSKERARKVCKTVLIS
GGGPTLLMPDRCSAFCLPLPFFVCIRKSVVKMFQRMAFHEETSDTVRQKI
STFEISSFALKAIMQGQNWHESTEEYHASLNLPVLLVYGKGDQFVTLGEE
QWMQETIFGADLEVIEGAGHMVMLEKPTHVNDAIHSFLNRDSSTWSSHPA
PEERPPGRGAAFQSPQLLENSEASVRSNGGRLSRLSRTSIRSKTMM Run BLAST on NCBI transcript from alignment at sc0000276:4138..14831+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017777 ID=TCONS_00017777|Name=TCONS_00017777|organism=Clytia hemisphaerica|type=transcript|length=10694bp|location=Sequence derived from alignment at sc0000276:4138..14831+ (Clytia hemisphaerica)
GTTTTTTATGATGGTATTTTGGTTTGGTAGAGATATCTTGAGTCTATTCT
GATTCAATACATCTACAGATACAGAGGTaaataagtttttcaaaaaagcc
actgaatttttctttcaagtagtgttttttttaatttttagagtaaaatt
cttaaaaattcttttctttCTCAATCATGTATGTTTTCGGCCGGGGTTTT
GTCAAAGTCCTCAAATGGCCAAGTGGCCTGAAAAACTTTGTGCTGTACCC
CATGGGGTTTTCATGCAACCACTACCTTgaaattgggtaacttgcattag
TTGAGGGAAACTTGTGCATCATAGGCATAGGCGGCATagccatcaaaaca
aataaaagagtcccctgcccagttggcaaCCGGTCTAGTTGGCAACCaaa
cgtctttgaacccagaaaagtcatacaaaaaaaaacctctggagaatttc
tattggtagttatctgccttgacctatttcccgtatatactgtgtaaaaa
aagttttagaaaaaaacgagtagaatccgaaagatccaactttgcagaag
cacacgaaaaagctggatttttcaaaaaaaataaaaaatggctacctgta
cacgtaagaaaaaacgcttcaactcccactccaaaaaatacttgtccaaa
agTATGAGTATGTTAGAAAGAATTTCTGTAAAAGTCAGCTCGATACAGTT
TCCCNTCCAAAAGTATGAGTATGTTAGAAAGAATTTCTGTAAAAGTCAGC
TCGATACAGTTTCCCTCgtgtgaaatattgataaaaaagttgatgcaatt
AGCTTCGATATTTGAcatccagtctgcgaccgaccaaactcaaaaaaaat
gaaaaagaatactccacattgcaatcaaaacattctAGACGCAActagag
aaaaaaagaagactttacatTACGATCAAAACTTGACAGCATAGCTCCAA
TGCAAAGTTTCTAGCTCTGGATTGAAATAACAAGGGAAACTGGTATATTA
AACTCCGGGTAgacataaaaaaatttttttcaaatgaagactctccatag
actgccactttcacaacaaaacaaaaacaaactttagaaaaaaatggcaa
cttgaagaaaaattctgaaaaacatgccgaagggaaatgtaagtaagcta
ttttaaaacaaaagaacgagtgtaaataaatttaatacgGGAAGGCTTAT
GAGTTTATGATCAATTAATATGACCTTTTACCTGcagtagagcactgatt
ttctctttCTTAAGATCGGTTGCAGACTAGTACgtcggtcgggaactggg
cactagtaccgctcgcttcgaaagttttttattctaagaagagcgcctca
aataaaaattttttcaaaaaagtaaaaagttagtgaaaaatttgaatcaa
aaaatttcggtcgccaactgggcagggtactcttgaaggcttcttcataa
agacgaaagacatgtatctatttttcggatccggtatgcAGGAATAGTGT
CATGACCTGCAGGcaacctggtagggttgggtatgggtgtggtttgggtg
tggttacgtatcagactGGCTAGGAAtcgggttattatcagttagggtta
gggttgaaattgattttctcttaatacagtctggtctgcagtttgtacaa
tataaatagccgtcagaagcgCTACCCTGGCATGAATctgtggcgcagtg
gataaggcaatgggtttcaaaacatcggaactttgcatttagtgggttcg
aatcccaccggtggcgatctgtcggtaaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTCTTAAAGGTCTTAACAGAAGGTAGATCTCTTATATTCTTAGAATCTC
ATACTTGCCGCATGAGTAGTGCATAACAATCCttgttattcaaaaaactt
aaCATCCTCATCATTTTATATATACAAAAGTTCTCTTTTTGATTTGGTCC
TATTAGACAAGGGCGGTCCTTACAAATTCGAAATAGCATATTTGtcagat
tgttttgttttcacccatcccgtTAGAGCTTCAGTGTGGTGggaagaaaa
caatcacaatctgatctcaggttaaaaAGTACCGTGAGATCAGATAACTT
GCATAAAAGGCAttgtggtatagtggacatcaaccttgatttCTGTACAG
GCGGCCAAGGTttgattcccactcacaacggttcacttggcaagtaaaCA
AACCTTAGCCCGGGTCGACCCAtcccatgtgaggggaattgggtagtcag
ttcaaggtgctgacggtgatgcttactcaaagcatctatagttgtgAGAA
TGGGCTccagagcctcctgtaactcaaccataatagataGATATATCAGT
GGATGCTAACTTGAATAGCTCTCAAATGAATggcctggctggtcattaaa
atacaaattcaaatcaaaacaaacctgacaattagtcacactaggaaatc
aagctttcagaaaaaataacatcagtcatctacaggattcatttgcaaca
acaaggatgagagttacctgaatcaagttagCAAGACAAtttattaaaac
ttgaaagtttgaaacaaaataaaacgtgcagcagccaaaatccaccaacc
aaaatttgtcattcaattcccaagacagcgcttcaatttttaaggccttg
tttatacgctaaagtaaaaacaactctgcacatgtaaatgggtcaatgtt
tgaggtctggcaaaatttccaggagataGCTTATCCGGCAGTGTGCGGAT
CTACGTGGGTTTCGTCTCCCCCATAGATCTtattcttgggaagttgatct
tcaaattagttctcaaggttgggttggctcaaattttttcatctatggct
caaattttaggcaatttctcatagtttttgagaatgttaattACATTAAA
AAGTGCCGGGttgttttttcatgaatccctttataAGTTTTGCCAGGTTT
TACGGTGCatatttttgcttgagagtcaaaaggtaaacgatatagcgctt
tcgcagcattaatctttgatatgtaTTTCggtgggacgctagtgtgacga
ACTgcctgatttacaaaatttacggATTGTAAAATGTATAATCTCCTAAA
CATAAAAGTGATATCATGCATTATGTTGGGTATTCCTAAAAGGTAGGGTA
CCCCAATTGGGCTGCTACTATGTATCGAGAATGGGCCTTCGGGTCTGATG
TTACTTAAAAACCCatttaatttacagaccagaaaaaccGGAAATTTGTG
GAGGAAAGCCAGGAGTTATGATTctaaagaatatttcaattaaTATTGCA
CGATGCAAAAGATATTCAAAGATACATTAATTACCATGTGATCAAAGCAT
AATGGTGTATGAAATAGAGCTTAGTGACAAGGGGTTTATATATGCCTAAT
ACATAATATGGGTAGCtacttcaaaaatgataataACTCGACCCATTGAA
GTAAGTCATTATGTTATTGTGTACATAATAGATTAAAAgacaaaagattg
aaaatatATAAGAGTCTGATGAAAGatcaaaatgatcaatttgTAAAGTG
GCAGCTTTTAACAACAAATTTAGAGACTTTTAAATAGAAATAAGataaag
aataacaaaattaNAgcgcttcaatttttaaggccttgtttatacgctaa
agtaaaaacaactctgcacatgtaaatgggtcaatgtttgaggtctggca
aaatttccaggagataGCTTATCCGGCAGTGTGCGGATCTACGTGGGTTT
CGTCTCCCCCATAGATCTtattcttgggaagttgatcttcaaattagttc
tcaaggttgggttggctcaaattttttcatctatggctcaaattttaggc
aatttctcatagtttttgagaatgttaattACATTAAAAAGTGCCGGGtt
gttttttcatgaatccctttataAGTTTTGCCAGGTTTTACGGTGCatat
ttttgcttgagagtcaaaaggtaaacgatatagcgcttttgcagcattaa
tctttgatatgtaTTTCggtgggacgctagtgtgacgaACTgcctgattt
acaaaatttacggATTGTAAAATGTATAATCTCCTAAACATAAAAGTGAT
ATCATGCATTATGTTGGGTATTCCTAAAAGGTAGGGTACCCCAATTGGGC
TGCTACTATGTATCGAGAATGGGCCTTCGGGTCTGATGTTACTTAAAAAC
CCatttaatttacagaccagaaaaaccGGAAATTTGTGGAGGAAAGCCAG
GAGTTATGACTctaaagaatatttcaattaaTATTGCACGATGCAAAAGA
TATTCAAAGATACATTAATTACCATGTGATCAAAGCATAATGGTGTATGA
AATAGAGCTTAGTGACAAGGGGTTTATATATGCCTAATACATAATATGGG
TAGCtacttcaaaaatgataataACTCGACCCATTGAAGTAAGTCATTAT
GTTATTGTGTACATAATAGATTAAAAGACAAAAGATTGAAAAGATATAAG
AGTCTGATGAAAGATCAAATGATCAATTTGTAAACTGGCAGCTTTTAACA
ACAAATTTAGAGACTTTTAAATAGAAATAAGataaagaataacaaaattt
aaaaaaggaaatgatcgaaaaatattttcttaattttaccaAACGAATTT
GTTCTgcgtttttcagaaattttattcTGGTCTTTATATTTCCAAGTAAG
AGAAGAAGGAAGACATCCATGGCACCtaaacattataaaaaaaagtagat
TTATAGACTATTGCAACTCAAGTTTTAAAGCAATCTTAAATCTGTTTTTT
GTAAAGGATCAATCGAAGGTTTTAGTATCATTCATCACAAAATCAAGCAT
CTGTTTATAAAATTTAGGACAAAAAGTGGTACCCCAATAAGCCTAATTGG
GGCCCGAATTGGGGTGCCCTACTTTTTACGAACACCCCATTATGTTTTTT
AATatcattattaaatttttctcctcGTTCTTCCGTCAGTGAATTTTAAT
CattgatttattttattttatttctatcAAAGTTAAATACAAAGAAATAA
ATGATGAATTTGTTGTTTTAAATGGGTCTTGTGATGTTGAAATGCCAAGA
GCAGAAAATACTTCTGCAACATCAATCAACTCTAAAAACACTTCAGTGAG
TGCCAGTGCTGTTCATCCTACTGAATTACAGGCTAGTGAAGAGAAATCCA
GTCTACAAAATGAACGTGCAGTTGATCATTTATTCACAACCACCAATCGT
TGTAAAGCATCTCTCTTCATCAATACAGGAGAAAATCGAACTATCCACGT
GGTCCATTATGCCCAACGAGAGCAAGACTTGTACACACAATCAACATTCT
CCAAAACAGAGGATGAAAGTTATGAATCTAAAGTTATGTTATTCTTTATT
CACGGAGTTGGTGGAACTATANTTTATTTCAATCAAAGTTAAATACACAA
AGAAATAAATCATGAATTTGTTGTTTTAAATGGGTCATGTGATGTGGAAA
TGCCAAGAGCAGAAAATACTCCTGCAACATCAATCAACTCCAAAAACACT
TCAGTGAGTGCCAGTGCTGTTCATCCTACTTGATTACAGGCTAGTTAAGA
GAAATCCAGTCTACAAAATGAACGTGCAGTTGATCATTTATTCACATCCA
CCAATCGCTGCAAAGCATCTCTCTTCATCAATACAGGAGAAAATCGAACT
ATCCACGTGGTACATTATGCCCAACGAGAGCAAGACTTGTATACACAATC
AACAGAGGATGAAAGTTATGAATCTAAAGTTATGTTATTCTTTATTCACG
AAGTTGGTGGAACTATACAAATGTGGGAACCTCAGATACATTATTTCCTT
ACTCTTGGTTATGAAATTATAGCATTAGATTTGTTGGGGCATGGTCAAAG
TGGGAAACCACGTGTATATAATGCATATCAATTCACAGAGCTGGCCTCTG
atgtaatgtttatttttgatcGATTTAGTAAACGTAGGAACGTTTTGATT
GGACACTCTTATGGGAGTTCATTTTGCACAATGTTATCGAAAGAACGAGC
ACGTAAAGTTTGTAAAACTGTTTTAATTTCTGGTGGAGGACCAACATTAT
TGATGCCAGATCGTTGTAGTGCTTTTTGTTTACCATTACCTTTCTTTGTT
TGTATAAGAAAAAGTGTGGTCAAGATGTTTCAAAGGTAAAACCTTATCTT
TTTTCgtattttgatgtttgatgaAAACAGGTTTCTGGATTTCAACCATG
GAAAATGTTCGATAACTATTTCAAAAGAAGGTTTGCATATGTACTTTAAT
CCAAAATAATCACTGATAAATTATACTAGAAAATCTATTGATACCTCGTC
TTATTCTTGTGGAAAGTTTTTCTagtaaacttttcatttttatttttctt
cccaAGGGCTTAGAATATATAAATTAGATTGGATCATTTTACAAATTAAT
TGTGTTTAAATTGAACGTTCTTTAAAACGGTAAACTATTTACTCCATTTT
TCAGGATGGCATTTCATgaagaaacaagtgatactgtTCGTCAAAAGATT
TCAACTTTTGAGATTTCATCTTTCGCTCTTAAAGCCATCATGCAAGGACA
GGTAAAGTGTGAAGCCAATACAAACGGATAAATTATGTTGAACCTAGGTA
ACAGCAGTAACAGTGTTGTGAAAGACAGATAAGTTATCATTTAAAAGATT
TCTGcaggagtaattagttatttaTAAGACCGTCGCGTTCTTTCAAACCT
CTTGAAGCCTCATAGAAAGTACAGGGAGGTGATGAAATTCAGctaaaatc
taagaaaaaattgatgataatttgagaaaaaaataccgATACAGATGGGG
TCTCACCCGGTGGAACCAGcgaaccaaaactcgatggggattaatatttg
aattccattgttttcaagccagataattcagtagggatggaaaatgtatt
tggaaaataatttgcagtgaggattcgtttatctgattattttcagcggg
gaaaAAATGAGAGTAGAATTTCCCACGAGGGACAATTTTTTGCCaatatt
ttccagtgggaagggtttccAGTGAATCTGTGAGAAGAGAGTGTACACAC
AAGCTACACAAGCTCCATTCAAAAGCAATAAGTAAAGAGAGTCTTCATAA
TAAAAAATTGTCTTTATATACCACGTGGAGGGAGTTTTATTGCAACCAAT
TTCCAACTTTCCCGATGATTCTGTGACCAAAAAGATGAAGGGAAAGAGGA
AATTTCCTCAAGCGAGACTGAAAGTTTGGAAAAACCTAAGAAAAAGATTA
ACGATTATTTAATAAATACAGATGTACAAGTGTATAACTAATGCAATATA
AATTAACAGCCTTGGACTGAATGatattttgtttatgttttttgtttttg
tttccaGAATTGGCACGAGTCAACAGAAGAATATCATGCTAGTTTGAATC
TACCTGTACTGTTGGTTTATGGGAAAGGTGACCAGTTTGTTACTCTGGGT
GAAGAACAATGGATGCAAGAGGTAATTATCCCATAATGCATTTTGTTCTT
TACTTCGTTcccatagtgtgcagaggggtctgaaccccccattaatattt
catccccccctataaaggtatcccccctatttttaaatttttttgatccc
GCACCATTTACAGGGGTCCGAGCCCCTTCGAACACAACATTCAAACGTTT
TTGTTCAAACANGAGCCCCCAGCATATAATTTGTACTCCCAGTATTGGGG
aagaattttgatgaatgaaatatatttttcagtgtGAATTCGTACCAATA
GTCAATGAACTTGAAAAGACTAGCAAATAAACAGTAAACTAataattttt
taaccaaaaagttactatcccccctatttttatttgatcccccccctata
agctcaaaccccccattttaactggaaaattgcccatccccccctataaa
gccttccttgaaaactcggatcccccccccttaaaaaagggggggggttc
atactaTGGTTCCATACTTGAAATTTTTACTACATGTCTCAATCCCTATC
TAGATTAATTGGAAAATGACAagccaaaaaaattacagtactTTTAAAAG
GGATTTTAAATGTCCTTTAAGTCTCCCACTTTCGGATATGGGTTAGCAAC
CACGGGCTGTCAgtataattttaataaaaataaaaacgaacCAAACTATT
TTTACAGACGATATTTGGTGCAGACTTGGAGGTTATCGAAGGCGCTGGTC
ACATGGTCATGTTAGAAAAACCTACACAGTATgtcatttttctttatata
cGTTCTTTATTTAACGGAGATGGATCTAGGCAATAGGTATATTTGAAGGC
TAGAGTCGCATCTCCTATGTaggatttgatttgattggtaaAAACCCTGA
TATACCTTCTTCCTCAGTACACCAGGATCTAACCAAATCAAAAACTAACC
ATCTCCGCTGCAGTAAAAAAAAGCCTACTTAggtacataaactcgctaat
acacgtttttttttaagaaacacacttttaagaaacatcaggctcagaat
gcctaaaaactaagaaatttaagaaacatGTTGAGgttgagaatgagaaa
ataacattttttaaccttCTAATCAAAacacatgttttttttctttgcat
gaaaataggctgattatgtcaaaaagtttagaaacatgtaagaaacattt
aagactcaaaaggccgatttcttaagaaatattgaggctgcttggtaaag
ctagtttcttaaaaataaaacgtgtagCCTCGACCAAGGCTGATTTTAGT
TTCTCATTTCAGTGGCACAAAAGTCTATTGTAATGAGTTTTCTTATATTC
TTCCGTTTAGCGTCAATGATGCTATTCATAGTTTTTTAAATCGCGATTCA
TCCACATGGTCATCCCACCCTGCTCCTGAAGAAAGACCGCCAGGGCGTGG
GGCGGCTTTTCAAAGTCCACAATTGCTGGAGAATTCTGAAGCATCGGTTC
GTTCTAATGGTGGACGACTTTCACGTTTATCGCGCACTTCAATACGCAGT
AAGACTATGATGTGAGAAAAGGTGGAAGATTTTAACGTTGGAACGGGATA
GTGCAAGGGCTCtctcttgttaatttttcgaaaattttctaaccaccgga
ccttattaggacccctcgtttattaatttttaagaatattttcagttagc
AAGAAGAAGTcgccttattttgctccaaaaagcctgatcttagc Coding sequence (CDS) from alignment at sc0000276:4138..14831+ >TCONS_00017777 ID=TCONS_00017777|Name=TCONS_00017777|organism=Clytia hemisphaerica|type=CDS|length=4455bp|location=Sequence derived from alignment at sc0000276:4138..14831+ (Clytia hemisphaerica)
ATGTTATTCTTTATTCACGAAGTTGGTGGAACTATACAAATGTGGGAACC
TCAGATACATTATTTCCTTACTCTTGGTTATGAAATTATAGCATTAGATT
TGTTGGGGCATGGTCAAAGTGGGAAACCACGTGTATATAATGCATATCAA
TTCACAGAGCTGGCCTCTGatgtaatgtttatttttgatcGATTTAGTAA
ACGTAGGAACGTTTTGATTGGACACTCTTATGGGAGTTCATTTTGCACAA
TGTTATCGAAAGAACGAGCACGTAAAGTTTGTAAAACTGTTTTAATTTCT
GGTGGAGGACCAACATTATTGATGCCAGATCGTTGTAGTGCTTTTTGTTT
ACCATTACCTTTCTTTGTTTGTATAAGAAAAAGTGTGGTCAAGATGTTTC
AAAGGATGGCATTTCATgaagaaacaagtgatactgtTCGTCAAAAGATT
TCAACTTTTGAGATTTCATCTTTCGCTCTTAAAGCCATCATGCAAGGACA
GAATTGGCACGAGTCAACAGAAGAATATCATGCTAGTTTGAATCTACCTG
TACTGTTGGTTTATGGGAAAGGTGACCAGTTTGTTACTCTGGGTGAAGAA
CAATGGATGCAAGAGACGATATTTGGTGCAGACTTGGAGGTTATCGAAGG
CGCTGGTCACATGGTCATGTTAGAAAAACCTACACACGTCAATGATGCTA
TTCATAGTTTTTTAAATCGCGATTCATCCACATGGTCATCCCACCCTGCT
CCTGAAGAAAGACCGCCAGGGCGTGGGGCGGCTTTTCAAAGTCCACAATT
GCTGGAGAATTCTGAAGCATCGGTTCGTTCTAATGGTGGACGACTTTCAC
GTTTATCGCGCACTTCAATACGCAGTAAGACTATGATGTGAATGTTATTC
TTTATTCACGAAGTTGGTGGAACTATACAAATGTGGGAACCTCAGATACA
TTATTTCCTTACTCTTGGTTATGAAATTATAGCATTAGATTTGTTGGGGC
ATGGTCAAAGTGGGAAACCACGTGTATATAATGCATATCAATTCACAGAG
CTGGCCTCTGatgtaatgtttatttttgatcGATTTAGTAAACGTAGGAA
CGTTTTGATTGGACACTCTTATGGGAGTTCATTTTGCACAATGTTATCGA
AAGAACGAGCACGTAAAGTTTGTAAAACTGTTTTAATTTCTGGTGGAGGA
CCAACATTATTGATGCCAGATCGTTGTAGTGCTTTTTGTTTACCATTACC
TTTCTTTGTTTGTATAAGAAAAAGTGTGGTCAAGATGTTTCAAAGGATGG
CATTTCATgaagaaacaagtgatactgtTCGTCAAAAGATTTCAACTTTT
GAGATTTCATCTTTCGCTCTTAAAGCCATCATGCAAGGACAGAATTGGCA
CGAGTCAACAGAAGAATATCATGCTAGTTTGAATCTACCTGTACTGTTGG
TTTATGGGAAAGGTGACCAGTTTGTTACTCTGGGTGAAGAACAATGGATG
CAAGAGACGATATTTGGTGCAGACTTGGAGGTTATCGAAGGCGCTGGTCA
CATGGTCATGTTAGAAAAACCTACACACGTCAATGATGCTATTCATAGTT
TTTTAAATCGCGATTCATCCACATGGTCATCCCACCCTGCTCCTGAAGAA
AGACCGCCAGGGCGTGGGGCGGCTTTTCAAAGTCCACAATTGCTGGAGAA
TTCTGAAGCATCGGTTCGTTCTAATGGTGGACGACTTTCACGTTTATCGC
GCACTTCAATACGCAGTAAGACTATGATGTGAATGTTATTCTTTATTCAC
GAAGTTGGTGGAACTATACAAATGTGGGAACCTCAGATACATTATTTCCT
TACTCTTGGTTATGAAATTATAGCATTAGATTTGTTGGGGCATGGTCAAA
GTGGGAAACCACGTGTATATAATGCATATCAATTCACAGAGCTGGCCTCT
GatgtaatgtttatttttgatcGATTTAGTAAACGTAGGAACGTTTTGAT
TGGACACTCTTATGGGAGTTCATTTTGCACAATGTTATCGAAAGAACGAG
CACGTAAAGTTTGTAAAACTGTTTTAATTTCTGGTGGAGGACCAACATTA
TTGATGCCAGATCGTTGTAGTGCTTTTTGTTTACCATTACCTTTCTTTGT
TTGTATAAGAAAAAGTGTGGTCAAGATGTTTCAAAGGATGGCATTTCATg
aagaaacaagtgatactgtTCGTCAAAAGATTTCAACTTTTGAGATTTCA
TCTTTCGCTCTTAAAGCCATCATGCAAGGACAGAATTGGCACGAGTCAAC
AGAAGAATATCATGCTAGTTTGAATCTACCTGTACTGTTGGTTTATGGGA
AAGGTGACCAGTTTGTTACTCTGGGTGAAGAACAATGGATGCAAGAGACG
ATATTTGGTGCAGACTTGGAGGTTATCGAAGGCGCTGGTCACATGGTCAT
GTTAGAAAAACCTACACACGTCAATGATGCTATTCATAGTTTTTTAAATC
GCGATTCATCCACATGGTCATCCCACCCTGCTCCTGAAGAAAGACCGCCA
GGGCGTGGGGCGGCTTTTCAAAGTCCACAATTGCTGGAGAATTCTGAAGC
ATCGGTTCGTTCTAATGGTGGACGACTTTCACGTTTATCGCGCACTTCAA
TACGCAGTAAGACTATGATGTGAATGTTATTCTTTATTCACGAAGTTGGT
GGAACTATACAAATGTGGGAACCTCAGATACATTATTTCCTTACTCTTGG
TTATGAAATTATAGCATTAGATTTGTTGGGGCATGGTCAAAGTGGGAAAC
CACGTGTATATAATGCATATCAATTCACAGAGCTGGCCTCTGatgtaatg
tttatttttgatcGATTTAGTAAACGTAGGAACGTTTTGATTGGACACTC
TTATGGGAGTTCATTTTGCACAATGTTATCGAAAGAACGAGCACGTAAAG
TTTGTAAAACTGTTTTAATTTCTGGTGGAGGACCAACATTATTGATGCCA
GATCGTTGTAGTGCTTTTTGTTTACCATTACCTTTCTTTGTTTGTATAAG
AAAAAGTGTGGTCAAGATGTTTCAAAGGATGGCATTTCATgaagaaacaa
gtgatactgtTCGTCAAAAGATTTCAACTTTTGAGATTTCATCTTTCGCT
CTTAAAGCCATCATGCAAGGACAGAATTGGCACGAGTCAACAGAAGAATA
TCATGCTAGTTTGAATCTACCTGTACTGTTGGTTTATGGGAAAGGTGACC
AGTTTGTTACTCTGGGTGAAGAACAATGGATGCAAGAGACGATATTTGGT
GCAGACTTGGAGGTTATCGAAGGCGCTGGTCACATGGTCATGTTAGAAAA
ACCTACACACGTCAATGATGCTATTCATAGTTTTTTAAATCGCGATTCAT
CCACATGGTCATCCCACCCTGCTCCTGAAGAAAGACCGCCAGGGCGTGGG
GCGGCTTTTCAAAGTCCACAATTGCTGGAGAATTCTGAAGCATCGGTTCG
TTCTAATGGTGGACGACTTTCACGTTTATCGCGCACTTCAATACGCAGTA
AGACTATGATGTGAATGTTATTCTTTATTCACGAAGTTGGTGGAACTATA
CAAATGTGGGAACCTCAGATACATTATTTCCTTACTCTTGGTTATGAAAT
TATAGCATTAGATTTGTTGGGGCATGGTCAAAGTGGGAAACCACGTGTAT
ATAATGCATATCAATTCACAGAGCTGGCCTCTGatgtaatgtttattttt
gatcGATTTAGTAAACGTAGGAACGTTTTGATTGGACACTCTTATGGGAG
TTCATTTTGCACAATGTTATCGAAAGAACGAGCACGTAAAGTTTGTAAAA
CTGTTTTAATTTCTGGTGGAGGACCAACATTATTGATGCCAGATCGTTGT
AGTGCTTTTTGTTTACCATTACCTTTCTTTGTTTGTATAAGAAAAAGTGT
GGTCAAGATGTTTCAAAGGATGGCATTTCATgaagaaacaagtgatactg
tTCGTCAAAAGATTTCAACTTTTGAGATTTCATCTTTCGCTCTTAAAGCC
ATCATGCAAGGACAGAATTGGCACGAGTCAACAGAAGAATATCATGCTAG
TTTGAATCTACCTGTACTGTTGGTTTATGGGAAAGGTGACCAGTTTGTTA
CTCTGGGTGAAGAACAATGGATGCAAGAGACGATATTTGGTGCAGACTTG
GAGGTTATCGAAGGCGCTGGTCACATGGTCATGTTAGAAAAACCTACACA
CGTCAATGATGCTATTCATAGTTTTTTAAATCGCGATTCATCCACATGGT
CATCCCACCCTGCTCCTGAAGAAAGACCGCCAGGGCGTGGGGCGGCTTTT
CAAAGTCCACAATTGCTGGAGAATTCTGAAGCATCGGTTCGTTCTAATGG
TGGACGACTTTCACGTTTATCGCGCACTTCAATACGCAGTAAGACTATGA
TGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017777-exon-sc0000276-1491911889:4138..4213 | TCONS_00017777-exon-sc0000276-1491911889:4138..4213 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:4138..4213 | TCONS_00017777-exon-sc0000276-1510915933:4138..4213 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:4138..4213 | TCONS_00017777-exon-sc0000276-1575043694:4138..4213 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:10620..10707 | TCONS_00017777-exon-sc0000276-1491911889:10620..10707 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:10620..10707 | TCONS_00017777-exon-sc0000276-1510915933:10620..10707 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:10620..10707 | TCONS_00017777-exon-sc0000276-1575043694:10620..10707 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:11116..11772 | TCONS_00017777-exon-sc0000276-1491911889:11116..11772 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:11116..11772 | TCONS_00017777-exon-sc0000276-1510915933:11116..11772 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:11116..11772 | TCONS_00017777-exon-sc0000276-1575043694:11116..11772 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:12092..12188 | TCONS_00017777-exon-sc0000276-1491911889:12092..12188 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:12092..12188 | TCONS_00017777-exon-sc0000276-1510915933:12092..12188 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:12092..12188 | TCONS_00017777-exon-sc0000276-1575043694:12092..12188 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:12995..13108 | TCONS_00017777-exon-sc0000276-1491911889:12995..13108 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:12995..13108 | TCONS_00017777-exon-sc0000276-1510915933:12995..13108 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:12995..13108 | TCONS_00017777-exon-sc0000276-1575043694:12995..13108 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:13795..13865 | TCONS_00017777-exon-sc0000276-1491911889:13795..13865 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:13795..13865 | TCONS_00017777-exon-sc0000276-1510915933:13795..13865 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:13795..13865 | TCONS_00017777-exon-sc0000276-1575043694:13795..13865 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1491911889:14448..14831 | TCONS_00017777-exon-sc0000276-1491911889:14448..14831 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1510915933:14448..14831 | TCONS_00017777-exon-sc0000276-1510915933:14448..14831 | Clytia hemisphaerica | exon |
| TCONS_00017777-exon-sc0000276-1575043694:14448..14831 | TCONS_00017777-exon-sc0000276-1575043694:14448..14831 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000276 | supercontig | sc0000276:4138..14831 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00017777 vs. Swiss-Prot (Human)
Match: ABHD8 (Protein ABHD8 OS=Homo sapiens GN=ABHD8 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.475e-69 Identity = 121/284 (42.61%), Postives = 170/284 (59.86%), Query Frame = 1
Query: 328 NRTIHVVHYAQREQDLYTQSTEDESYESKVMLFFIHEVGGTIQMWEPQIHYFLTLGYEIIALDLLGHGQSGKPRVYNAYQFTELASDVMFIFDRFSKRRNVLIGHSYGSSFCTMLSKERARKVCKTVLISGGGPTLLMPDRCSAFCLPLPFFVCIRKSVVKMFQRMAFHEETS--DTVRQKISTFEISSFALKAIMQGQNWHESTEEYHASLNLPVLLVYGKGDQFVTLGEEQWMQETIFGADLEVIEGAGHMVMLEKPTHVNDAIHSFLNRDSSTWSSHPAPE 1173
RTIH+ D + T + ++ V+LFFIH VGG++ +W+ Q+ +F+ LGYE++A DL GHG S P+V AY F LA D+ IF R++K+RNVLIGHSYG SFCT L+ E V K ++I+GGGPT L P CS F +P C+ + F + F + + + ++ + F +SSF L+A+M GQ W E E YHA L +PVLLV+G D+FV + E+Q M E + A L++I+ HMVMLE P VN +H FL W P+P+
Sbjct: 155 KRTIHI--------DCEKRITSCKGAQADVVLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEGDEVYHAELTVPVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFL-----LWEPEPSPK 425
The following BLAST results are available for this feature:
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