XLOC_009976 (gene) - C. hemisphaerica

Overview
NameXLOC_009976
Unique NameXLOC_009976
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000276:160617..166862-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009976 ID=XLOC_009976|Name=XLOC_009976|organism=Clytia hemisphaerica|type=gene|length=6246bp|location=Sequence derived from alignment at sc0000276:160617..166862- (Clytia hemisphaerica)
ACGGGATTTGACGAAAAAAAAGACGGGAAAACGGTATTTTAAAATCAGAC
AGTGACGGTATTTGACCTTATGCCGGTATTTGAACCTGTACAAACCGGTG
TGACGGTGTTATTATGCATTATTTTGATATACCGTGACCGAAAATGGATA
AACGGGATAAACAGCAAATCACTCTCCACAAAAAATCCACTTTTATAAAA
AAACATCATAGCATTGATTTTGAATAAAAAGGAGTATGGACATTTTTCTT
TTGTGTTTCTACGGTAATTGATCATTATGTCAAATTGCTCTTTTCTTATT
CATATGCAAATGAGCGTCATTCCATTGTTTCACAGTCCTATACACGAGAG
AATTTGATTTTAATTGCAATGTCAAAGAGCGCAAGACAAGTAAATTTATT
TTAGCTCAAATACACGCTACAGGAGACAAGGAGCTTAGAGAAGGGCTTTT
GTATATTGGTGCTATTTTTTTGTTTGTGTGTGGAAAGGACTCACATTTGA
CGACTCTTGTATAGAACAAGAATTCTAATTAACAGAGACACATCACTGAC
GCTGATAATCTATTTAATTCACATCGACTGCAAAATATTGAAGGAATTTG
AAGCAAAAGGATATCCACATAGAGTGAACATCGAGTTTCATTTGCAAGAA
TGGTTGTAACAAGCGATGAAAAACCTAGCGATGCTATTTCACCAAGTTTA
GCAAGTGCGGCAATGAGTTTCCCACCGCCACCACAATTTCAAGGACTACT
GCCACCTTCTGGGTTGAAAATTCCCCGATTTGGTGGAATGATGATGGACG
ATACAATGAAAATGAATCCATTCGGATTCTCGTTGCCTTTTACAACGATG
TCACATGTCCCGTATTTGAAACCGGTTTCCCCGAAACCAGAAGATCAATC
TGAAGATGATAAAGCTGGAAGTTCGGATGATGGTAAGAAAATATTTGAGT
TTTATTTTGAAATTCTTTTTATTCTTGTCTAAATCGTAAATAAACTGTAA
GTTGGTCTAATGTCGACATCCCTCTTATAATTTTTTTTGAATTGTGAAAC
AAGAATATATTTACCAGTACATCGTTTTAAACTGGTGTAATAAGGCTAAC
TATATAATACAAATTTACAGAGTTAAAAATGTTTGGGTCAAATATTTACA
GTTAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAAAAAAACTAGAATAAAAAT
ATAGTATACATACTAAGGATATTTCCTAAGCGCCAAAAATAGGGAAGTAA
ATGAAAATAAAAATATATTTAGATTTTGATATTTGTTGTTAAGAGGCTTG
TTGATATATCCTCGTTAATGTTCAGGTCTTTCTTACAGAAGACTGATCTG
CTACCACGTAGACAGATACCTACAGCTTTGCAAAGCCCAATGGATAGCTT
TTGCCTCATCCAGGTGATTACTTCACTGTATGGCTTGTCCTGTTTGCTTG
CCATCATTTCGGCCAAACGCGAGATAAATTTTGTACATTCACGTCCCATG
CCGCCAGTCGCAGAGAAGACCAAAGGTGTGAACGATCCATGTTCAATCTC
TAACACACGTTGGTTGTATGCTCTCTTCTTTTCCCGTTCGTTTGAATCAA
AACACTTCTTGAGGTCCTGGGAGACATGTCGTTTTGCAAGTGGGTTAAAA
ACCCTTATGTCGAAATCGCTTGTACAAAAGATTTCTCCTCTCTGACCGCT
AAGCAAAGAAATATAGTTTCCATCAGCGACTCCAACCCTTCTACTATTCC
TATCTCTAAAGAAGGGTGTCGACATTAGACCAAGTTACGGTATAGGGTGT
AAAGCATAAAATACCTCAATTTTGCGGTAAAAATAAAGGACACAACAAGA
ACAATTGGAGACTTAAATGTGTCAGAAAGGTTCATTTTTTAAAAATTTTA
ATAATTATTTCAAGAAAATTATTGAAAAAGACCTTGGGAAATAATTCAAA
CGGCGTAAAAATAATGATAATCTTTGGATGACATTCAAACGCTAGATTTG
ATTTTTATATTAGGCGTAGAAGTATTTGAATTTAAAGATGTTGTTAAGAA
TTGAAAATCTCAAAGACTGTGAAATATTTTTGTACGATATCATATGTCGC
TCGCATGCCCAATTGGGACTTGATAAGTGCAATGCAATTAAGATGAAAGA
AAGACCGCTAAATTACATCGGGTTATTGTTTAATTCACATCACTAATTAT
CGCCGTTTTATTATTCGAGAAAATACGAATTCAAAAAAAAAATTGTACAA
TAAAAGCATAAAGCACTGTGAAAGAAAATCTTGTCAAAAAAACTTGTCTC
ACAAAAATAATTTTTGAATATATTGCTGTGTTTATTTCAAAAATGACAAT
ATTCAAATTGCAATCTATTCCTGTTTTCACTCTAGCATTCCTTATTTTCC
TAAAAACTTAATATATAAAATTAATATTGGATTTCAACTTCTCAAAAGTC
TTCGTAAATAATTCAAATTCAGTTGCAATTCAACGTAAATGTCTCGACGT
TTATGACCGTTAACAAGACCTTGTGACGGGACTTTAATAAAGTAGCTTGA
CAGAAAATTTTCTTCGACGTGACTCTCCAAATTTTATCTAACACTGATAA
AATTGACTTAATTACCCATGGGAGGTCTTTAAACCATTCCATCATCAAAT
TTAAGGAGGTCTCTCAATTTAACTTAAGCAATATTTTCTTGGCATGGCAA
TCACTTTCGTTTTCTATTCTAAAATTTTCTTCTTCTTTCGAAACCTACAT
CTTTTGTTAACATGTACTACAATAACAAAATTTAACAAAAATCCTTAAGA
GGGAACATCTTCTTCGGCATAGTCAAGTCACTAGTAAAATATCTTACACG
TTTTTTTTATAAGAGCATACAAAAGTTTCGAAACCTTTGGATGTTTTAAT
TTTTTTGAGTTTTAAAAATGTCTAAAAATGTTCTTAACTTGTTCTTAAGA
TTTTGGCCATCGAAGCCTTGTGTTCTTATAAAAAACGTGTAACTGAAAAG
CCTCTTCTGTAAGTTGTAAAACTGAAACTTTGAAAATAATTTCGCCTTGT
TTAATCTTTCTAGAATCAAAAGATGGTGATGATAAAAACNCTTCTGTTTA
ATCTTTCTAGAATCAAAAGATGGTGATGATAAAAACGACAAAAACAACAA
CAAGAAGGGCGGAGCTGGAGGGCGGAAATCGCGCAAGCCAAGAACGATAT
ACAGCAGCCATCAACTTCGTGAACTTAACCGACGATTCAGTAGAACACAA
TATTTAGCTTTACCAGAACGAGCTGAACTAGCAGGTATGTAATTTGAATC
TCTAATCTTTCGATGTTTTTTTCCATACTTACAATACTTCAATCCAATAT
TTTTGCCTGAAAATCTTTACTTTGTTGGAAATCGCAATACTAGAGTAGAC
TCTCGCTTATTCGAACTTTTATTATCCGAATCTTTCTATAATTCGAACTT
GTTCCAAGTTTCCGTCAAGGACAAACCCTCGTAAAAATACTTCCTATAAC
TCGAATCTCTCCGTAATTCGACCGAATAAGATTCCCCATTCGAGTTCGAG
AGTTCACTGTGCTTGAATTCGTTGCGTTCATTGGGGGTCATTGGGATAAT
ATGTTCAATAAAAATCATCTTATTTAATCTGTTTCAATTTCATTTTCAGC
TGAACTCAATCTCACACAAACACAAATCAAAATCTGGTTTCAAAACAAAC
GATCCAAACTGAAGAAGATCGTCAAAAGTGGAGGCGTCCCACCTATTAGT
CCAACTATACAATCAGTATACAACGGTGAAACGCGGGTCCCTGTCACTCA
ATGGGAGAACTCACTAAAGGCTGCGTCCGCACTGGCAGCTAGTCATCTAA
CCCCTCCATCACCTTCAGCAATCACCTTTTCATCGTCTGCACCCACCTAC
TCGCATACTCCGGCCTCTTCAGTACACGCAATCCCGACTACTGCATCCAG
CTTCTTCCAGTCTGCAGTCCAATCATCAATGTATGCAAACATGTGGTATA
ATCCTCCCCCAGTTCCCCCACCAACAGGAGGAGACCTAACAAATGCAGAT
AGCTCCCCGGAAGCAGCACTTCCGACTACCTCAACGACATCATCTTTTCC
AATGTTTCCAAACATGGACTTACTAAGTCAAGCAGCTCAATCTATGTATA
ATCAATCACAATCATGCATTTAAACCTTTTTTCTAGATTTTTTAATGAAA
TTTTTCATTTTCTTTTTCAAAATTTTCTCATACGTTTGAACTAAAAATTA
TTACTCATACCGCTTTGTAGAGAATTGGAGCTTTGAAACGTGACGCATTT
TTGAATGAATAGAAGTTGCAATGGCAATATAGATGTCACCGTTTCTAAAA
ATATGACATTGGCCGATCATAGGTTAAATTTCGGTCACGAATCAGTAGCG
TTTAATTTTCAAATGTCAAAATTTAGTCGTCACTTAAATTCTGAGTTATA
AAAAGAATTTTGTCAGTAGCTTGTATGCCGGTTTACAATGTCACGCTCGT
TTCTTTCTATTCGTCATTTCCTTTACATCTAAAATTAAAATAAATACAAA
AAGGTTGTGAATTTTAATGAAATTTTACGAAATGTTTTTATCTTAGCATT
TAATGTATATAATGTTTTTGCTAGAAATACCTCTTGTGTAAATACTAACT
CCATTTTTTTTGTTAGTTAATTTTTAATTTAGGATATATCCTTGAGAATT
TAATGATAAAAAATGTCGAAATACCGTAGCAAAGTTAACTTCACGACAAT
GTTTCCTTTCATGATGTTTCAAAGCTGTCACATACTTAGACATCCCTGCC
TCGATAACCCGTCGTGGAAATTTAAAAGTCATGATCTCCCGCCCCTACTT
TATATTTAGAAAAGCGTTAAAACCTATGCAATACACTCATTTTTTTTACA
AGAACTAGTAGATTTTTGACGAGGCTTTTTTTGGTAATTTGAGCCTCAAA
TTGTTCTTATCCTGTTCTTATTCATAGGGTGAAATTGGGGTGTCTTAGGC
TTTAAACCCAATTTTTACTACTTTGACCACTAAATTGCTTTAAATTGAGT
AATTCTAGGCTCAGCATTGTTCTTATTTTCTTCCGATTTCAAGCCTCTTT
GTTCTTATAAAATCAATAGTGTCCGTCAATGGCGAATCTCTTATTCTTTT
CTTTTGAACCAACCACCCTAACTTAAAGACAAAAATTAGGGTAAGTTTCT
CTTGGGGTTATGGTGACTTAAAATCTTTCAAGCTAAAATAAATTCCAAAA
ACAACCCTCAGAAAAAGTAGGCCAACGCGCAAACGCAAACGCAAAATTAT
GAGATGTTTGCCCAACTTCCTTATGCGTGAAGCTACGAATGATGTGTTTT
TATAAAAGTGGATTTTTTGTGGAGAGTGATTTGCTGTTCATCCCATTTAT
CCATTTTCGGTCACGGTATATCAAAATAATGCATGAACCAAATTTTATGT
ACATTGTGCAACTGAAAAATGAAAAAAAAATTCGTAAATTTCATCAAATT
TTCCTGAAAGTAAACAATTATCTAACTTAAGTGGATAAATTTTGGCGTGG
ATTTAATTTGGCGATTGGCCAAAATACGATTTTTGGTGGGGATTTAATTT
GGCGATAGATCAATTTCGTAAAATTTGGAGGGGATTTAATTTGGCGAATT
GGAAACTTTGTCACACTGAAATGGGTGAAAATTACTCAAAAATATACTAA
AAAGCTGTGATTTTTCACATAATTCTCTTTTTGTTAAATTTGGCGGGGAT
TTCATTTGGTGAATTTTAATGAAATTTTACGAAATGTTTTTATCTTAGCA
TATAATGTATATAATGTTTTTGCTAGAAATACCTCTTGTGTAAATACTAA
CTCCATTTTTTTTGTTAGTTAACTTTTAATTTAGGATATATCCTTGAGAA
TTTAATGATGAAAAATGTCGAAATACCGTAGCAAAGTTAACTTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017799TCONS_00017799Clytia hemisphaericatranscript
TCONS_00017798TCONS_00017798Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Dll2 distalless homeodomain proteinTCONS_00017798-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000276supercontigsc0000276:160617..166862 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.82	9.33	2.32	2.13	318.73	240.88	228.62	249.18	101.94	133.34	61.06	53.96	24.46	25.88	17.57	24.76	4.15	4.21	15.46	9.33	0.22	0.26	16.96	15.93	0.02	0.14	1.8	1.36	13.65	15.74