XLOC_009982 (gene) - C. hemisphaerica

Overview
NameXLOC_009982
Unique NameXLOC_009982
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000276:280343..284029-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009982 ID=XLOC_009982|Name=XLOC_009982|organism=Clytia hemisphaerica|type=gene|length=3687bp|location=Sequence derived from alignment at sc0000276:280343..284029- (Clytia hemisphaerica)
GGCTATTAGGTACCCGAGAGTATTTGATTAAACAAAATGATGATCAACTG
CTTGATTTTAGATTATTATTTCTTTTCATTAACTGAAGGTCCAAATCAAC
CAGATGGTTCTGGCCATGTGTATTTCAACCCAAACTATTCTGCGCAAGTT
GCCTACGTTCCTGGTGCTGCAGGATACGTGGCACCACAGCCCTCACCTCA
ACAAGGAAATCCCTATGCTGCTGTTTATGCCGCCTATGTACCTGGTAGTA
CTGGCACCCAAGCTAGTCCAATTGTGGCCTCACCAGGTCAAGTCCCTAAT
GCACAGTATTATATGCATCCATCTGGTAGTATTGTTTGCGTCCCAAGACA
GGTATTATTATTTTTCTTTTGGACTTCGTCAGATTGTTTATTAATTTGAC
AGGAAGTGTTTGAAAAGCTTTGTTATGTGTACGACTCCAATGAGTTGTTT
CAAATTATATAAATTTTCCTAAATAGTGAAGCTATATAAACTGATATAAC
TAAGTAGTAGATGATTCATTCCATCAAAGAGTGCTCGATGATTAGGACCA
GTGCTTCATAATGTGTGTAAGAAAAACCATTTGAATATTATTTTACTTTT
ATTGATATTCATGGTCTTTTTATTTATTGTTTTTGCCCCAGGCTGGTAAT
GTTAGTGACGGGAACGTACAATTTATGACTCAACAACAGCATCAACAGCA
ACAAGTACAACAACATTACCAAGATGTTGCTAACCAAATGAACGCTATGA
ATATTGATAATCAAAATAGTAATACACGCACAGATAATGCAAGCCAACAA
CAAACTCAGCAACAAATTATTTCACCGACAAGCCCCTCTACACCGACCGA
ACATCCAACACCCGCTCAACAACAAAGAAAAATAGTTTATGTTCCTAGTC
CCAGTGATCAAATTCAACAAAGCGCCACTGCTGCTGCCGCTCAATACACT
AATTATCCTGCTGGATACCCAGTTCAATATTATCAAAACGTTGTACCAAA
TTATCCGGGTTATCAAGACACAACCCAAGTTGCAGCAGCTACTGCAGCGG
TACCCAGCAACATGGCACAACATGTTACCACGCCCCAACATGGAGCTTTG
ATGTACCAACGGGGTGGTAATTCCTTCTATGTACCGGTCACCGCAGCCGG
TGGTGCTCAAGCCCAACAACAAATGATGTTAGTTTCTGGAGGTGCAGGGC
AAATTATTAATGGACAGAAATGGACTGATTTTTATACGAGAAATAATAAA
TTTAGTAATATGGACAATAGTACTACTAACGAATATAGAAAAGTTGACGC
CTCATACCAACAAGGCTATGCAATACAACAGCCTGCACATCAACAGAATA
TTTCGATGGCTCAAAGACCATTAATGCAAATACCAGCAAACTATCAACAG
TATGCTTACATGCAAGGACCTCCCAAAAGGTAATCTAATATTAATTGCAT
AGCTGACAACTCTTTTGCATTTCAGCGCATCTCCCACATCAGGTATTTGT
TCCCAAATCATCCGCATATGTCCATCCATTCATTCATTCATTTATCAAAA
GAAAATATAGGTCATTTAACCAAGAATGTTGCCCTAAAAATAACTTATTC
TCTCTTTATGAATCTCTTTCTCGATATATTTCTCCACAGGTTTATGCACA
ATCAGGTGCTTGGTCAGCACTTTGTTCGTCCAAACATTCCAACTCAAAAG
AAATATCGTCCACACCATCGAGTTTCGGCAGGAAATGAACAAATACGTAT
CAGTCGTCCCAACTCACAACCTTCAGACTCCTCTGAACAGAATAGTAAGT
TGTTTTCCAATTATTTCTTTTTGACATAATTTTAATGAAAGAGTTATTAT
TTTTCTTTATTAACTGGTAAAAGCCGGTCAATACAAGAAAATGCGCTATT
TTGATTGGTTCTCTAGCGGTCAATATAATACGGTAAAGACCACTTCAGTG
CTTTGGTCAAACTGACGATGATTTTGAAAAAGGAAATTTGTTTCATAAAA
AATTTTCGTCAGTTTGAACATGATTTTAAAAACTGACGTTGCAATGAATT
CTCATAAGAAAGTGGCATCAGAATAAATCAAAGAAAATACTGGGTAAAAA
AGAAACGAAAAAAATCATGGGAAATGAGTGGAAAATGCATTTTTTGGCCA
GAAACACACAAAGAATGTTCACCAGTTAATAAACACAATAATATAACTGT
TTTCTCGGTCAATACGTCAAATATTGGCTTTATCCTGCGCACAGACCTCG
CAAGCTCGATCTGTACTTCGGCTGCGGTCAATATTTTACCGTATTGACCT
CCAAATCAGTTATTATTGTATCATTAAAGATTGAACAGAGTTACCGTAAT
TTGTTTTTTCCTCTTTTTAGCGGTTGGACATATTTTAGAAATATACGATT
TCCCTGACGCTACTGTCTCTGACCAAGACACTATCTTCGATGCCGTTCGC
AACTACTCGAGTGGTGCACGCATCTTAAAGATCAACAGCTCGAGTTCACA
AACATCACACAACTCTAATCAAGTCAAACCAACCATCTTGGCTATATTTA
AGTCGGCAAGCGAAGCTCAGAAAGCATTAGAGTCTGTGAAAAGCCCTTAT
TACAAGTTACGCGTTTCGAAAAAGTCGCCAACCCATCTGTCTACAAGCGA
TTACTCAGGTCACTCATCCAAGACCAAACCAACATAAACACCGTTCTTGG
ATATTCTAGTTTGGTTAGTACAAAATGCACGTTAGACCATGCCGTGGTGA
TGCTTTTATGAAAAGTGTAACTCTAAAACATTCCTCTTCCTGCCTTTGGT
TCTTTCGAATCCAAAGAAAAACAAACAAACAGTTCGATCGAAAAGATTTT
TCCAGTAATCTACTGCTAACTTTTTCAACGAATGCTTGCAACGAAAAACC
TTTTGACTCACATGAGATCTGATGAGGTAAGCGTGAAAAGGCTTTGTTCG
CTTTTAGTTGATTTTCTCGAAAGTTTGAAATCTTTTCTAGCCCTCGTAGC
TTCTCGAAACTTCAATCAGGATAATTACAGTCAGCCTATAAAACCTGTTG
TTTTTTTTATTTATTAAACTATTTAAAAGAAGAAAAAAGTATGCAAAATG
GGTGCAGAATTTTATGGAATAGCAAAACATTCAATACTCTTAAATTATGT
TTATAATACAAAAAAGTGAAAAGGATGGAATATTTATTTGAATATGTATA
GCCCAGATGTTTATCAACTTGCATTTTAGCATATTTTCAAAATTTTCTAT
ACCCGATCCCGTTTTAGCGCTTTGCATCACTTTCATACAGTAACCCCTCG
AGTCCTCTACCCTCCCTATTCATTGATTCTATCTTACCGGCCTTAATACG
GTATATTGACGCTCACAGAACCTTCCCTTCCCCAAACTCTCCCCTCTCAC
TCTTTCCCATTTTTACATAAGTATAAAGGGGACATTTTTACAGCCAAACC
ATACAAAAATAGTTGTCCAAATTCCATTTTGTATGGTTTGGCGCTGTAAC
AGTACTTTTTTACATCCAAAAGTTTTTTTTAACGAAATCTTGATTCCGGT
GTACTTACCTTGTACCTTTGGAGATTTTATTATTAATTTTTCTAGAGCAT
TGATATAGTAGGAATATCAGAAATTTCTTGTTATACTAGTAGTATTTATA
AAGAAAGAGATCATTTTTCTCACTTTACTTAAAAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017807TCONS_00017807Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017807-proteinTCONS_00017807-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000276supercontigsc0000276:280343..284029 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.43	48.01	13.96	9.06	73.04	55.64	69.79	78.52	42.72	55.78	51.16	34.66	47.48	48.01	49.42	63.16	43.15	46.44	37.31	38.69	37.84	36.8	54.02	62.48	69.47	73.72	60.21	58.83	56.64	56.07