XLOC_010217 (gene) - C. hemisphaerica

Overview
NameXLOC_010217
Unique NameXLOC_010217
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:12343..16185+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010217 ID=XLOC_010217|Name=XLOC_010217|organism=Clytia hemisphaerica|type=gene|length=3843bp|location=Sequence derived from alignment at sc0000291:12343..16185+ (Clytia hemisphaerica)
ATCAATGCTTATGTAAGGGACGAAATACCTTAAagaaaaataggaagtag
accACCTGTAGTGGTTTGTGAGTGGGTAGTATTCAACTATAAAAAGGATA
GTCAGAATCAAGGATGGTTTAGTCAACAGTGTAATCACATAAACCTTCAA
GTCTTGTCAAAAGCAAAAAGTCAGGAGGACTAGCAATAAGGACGACCATG
AAGCTGAGAGGTAACAttttattaaaatctttttaataaaaatcttttta
attttattaattATCATGATTTTGTCAGTTCATGTAAAGATTTGTGATAT
TTTGTTGGTCCTAACGGCCCTTTTAAAGCCGTCTCTTATACAGCAGGTCC
GAATATAGCGCTAAcattattaaaaaattgagtgaaACATCGATCCGCTT
AAAACTCACCTCACGGTAGTGGAATTATTTAGTAATACTTATACATCAGC
GGCTATAACATGAAAGCGGAGCATCCGCGATGTGCGTAAAGAGGCGGATC
AAGTGTCGGTGGCGACATCCTAGGGAAAGGAGCAGGCCCTCCCCTACCTT
GGTAGACAGCTAAAGAAAATAGAGCCTACTTTCGGATATATGTAATTTTC
TAAATATAATAGAAGTGtataggggccgtccacatagtacgtacgcacta
aaatgtcgaaaatcgagtaccccctcccctctgtacgcaagcgtacgcaa
attgctataccccctggtaagtacgtactttttcaatCAGCTCCCCCacc
ctcggttgaagaaaatttctaattcaaatcgtttggttaagagctttatt
tcatacatgaaactcaatgtttattagccctattcatactaggctttaaG
AGgtggttcaaaactagggggggcttttcctgcaccagcccttaactttt
gatctagtgggtctttttggatgaaatgtggcacacaagatccttgtcac
ataaggtaacttttgacaaatttttttttgataacgtcactcatcatgct
cAAAGTNgaaactttttcttttcctcgaTGCGTATAACaagaagcgtaaa
agtcgaaagaaaaacaagcaaaaaagggccatgaaaagtttttctttgcG
TACGTACGTTTTCCTTTGACctctcccctccccctgtacgcaagcatacg
cttttgagaagacccctcctcccggggggggggcactcaaggtaaatgac
ctaccagacgttcggcccttaagggtaggtttttcatagttcagctagtg
cactgtaagggtaggaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTTTGGgtcg
aacgtatggtcgttttcagatcgagtgcccccccgggcccctcctccccc
cttagtgcgtacgtactatgtggacggccccaaaGGAGTGGCACAAAAGC
GAGACATTGGACTGGAAGTCTTTCTTgcatttttcaataatttttcaaag
tacCTCGCCTAAAAAGTTgccattttttttttagatttcatcATCTTATC
CTTACTGGTAACAACCTGGTTGGGAATTTGTAACACAATGACTGTGCAAT
CAATCAACGAGCTACAAGCTCTTCTAAACGTCTACAAAGAAGAACTAATC
GAAACGGAGACCGCCAAActacaacaaaaaaacaaacaaacacttCCCGT
GATCAAATCTGAAGACAGTCAAATTTGCGGCCGAAAAATCcgtgaaattt
atcaaaaatgtaaaaatgagaCTTCAGAAAAGGCAGTAGACTGTGACAAA
AGATACAGCGAAAATTACCCAGTTTGCTTTTTCGGGAATTCTATCATACC
GGGAAAATCGAGCGGTGGCAAAAGTTGTTCAAAAACCTGTTTACGATACA
TGAATAATTGCCTAACACAATCTAACAAATTGGAAATCTATTTATGTATG
GGTGGTAGGGATACTTGTATGAGACAATGCGGTGCAAGTCAAAAACAAGG
AAGTGTAGTGGAGGACAGGAGACGGGAAGTGGAAAAGACACCAACCCTTA
GTAAGAGAGTCTCATGTAAACTTGAATGTAACAATAATTATAAGACATGT
AAAACTTGGGGTGATATTGGTAAAGTGTGCGACGCAGCCCATATGGTATG
TAATAATAATTGCCAAAAAACTTTCCAATAATTTGTAttcattttgttta
tttatttcgcGCGTAACAATTAGGTTTATCTTATTTATTATTGTATTTAT
TATTAAGAAATAGTTTaagaaatattataaatttgtaaaataaaatctga
aatgaataattgaaattgtaaaatattttgataacattttaCGTTCACCC
CAACTTATTTACATATAAAGAGAAATTTAAGGAACCATGAAACTCCATGA
AATCAAGAGTCACTCTTTTATTGTTTTCCCATGTGAAATCCGTAAATTAT
ATGGCTTACCATTGTTTATTAGAGTCTACAACACTTTTAACGTCTCATGC
GTTTAGGATCAAAATGACATAATATTTTTACTTGTGATTcactttcataa
aaaactggaaaatttgatagTTGAGTGCGCTTACTTAGGTTTAactcaaa
actttgaaacactGACGATTACATTGGGACTGTAGGCGGTCACAAACGTT
GAATTTGTATGATGCAACAGCATTCGACTTTGCACAATGTCGAAAAGTCC
ATGTGCATTTCTTAAAGCATCTATTCGATCCTCCAGCACTGCTGACCATC
CTTTTCTTTTGTAGAAATACATTATCCGAATTCAATTTTGCCAGCGAATT
GTATTTCCTTTCTAGGGAATCTAAAACATCAATCGGGGAATCTTCTTTCT
CGTCTCTTTCTTTCAGGGAATCGCAATCAGCCTCGCATGCATCCTTTCCA
ACAACACAAGTGAAAGATTCAACGCTCTCAGCTTTCAAATAACAATTATG
AAATGCGGTTCCACAAGACAGCTTACATTTGATTGGGTCTGTAATTTGAC
CATGATCTTTGGGAATGAAGCAGGCTGGGAAACATTTGATGAACACGTCA
GCCCCTTGAGTTTGTACTTCCGTCTTACTATCCAGTAATGCTGTCATGTA
ATTATTGCGGCATTTCTTGATGCACCCGTCTGCTGTGAGCTCTTTTTGAG
TTGAATTTGGATCGGAATCATCATTTTGTTTCAACTTGATTGTTTTTTTC
ACTAAGGACAATAAATCTTCGATTTCAGAGACTGAGGTTATATGTTTGCA
TGGTGCTTGGCGAACCAACAGCAACAAACTTATCGATGTAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018187TCONS_00018187Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:12343..16185 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.11	0.13	0.07	0	0	0	0	4.2	2.92	0	0.11	0	0.1	8.66	17.47	0	0	0	0.06	0	0	0	0	0.08	0