XLOC_010238 (gene) - C. hemisphaerica

Overview
NameXLOC_010238
Unique NameXLOC_010238
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:129274..136142-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010238 ID=XLOC_010238|Name=XLOC_010238|organism=Clytia hemisphaerica|type=gene|length=6869bp|location=Sequence derived from alignment at sc0000291:129274..136142- (Clytia hemisphaerica)
TAGTAGTAAAAAAAACAAACAACAACAACAAACAAATTAACAATAAATAT CTAAAGAAATGACATTGGCAGAATCAACATTGTTGAAAGTCGGGTTTTGG TGATTGGTTTCTGGACCTTGTTTTATATACTTCTTTACCAACAAGAAATG AATTCATTTGATTTTTTTATAAGACACTATGTTATAGTACATGTTGTTAC TTGCTATTATACATATTATAAATGTGGTACCCTTGAATATAACGGTAGTT CGGGCATTGTTGCACCAATGTATACAAATAAAAAGCCTGAGTCAGATGAC TTGTACTGTGTATACAAGATCAATGCTAACCAGTTCAATTCCGACAATAT CAATTTTATTACCTTAACATGGTCCAGATTTGATATACCATCAAACATGC CAGATTGTTTCAATAATTTCGTGCTAGTCTCAACCGGGTAAGCTTTTTGT TGATACCATACAGTTTTCAGCTAAAAAAGTTTATAAATCTTTATTCATTC TGGCAGAATTTTATTTTATTTATTTGAATATAATCTAGATTTCACTTTTC ACCAGAATTTTATGCAAACATGAACATTCAGATATTTTGGTTTGTTTTCT TTTTCTTTTACAAATGAAAGCCAATTTAGCTCTTTCAAACTGTTTGACNA AATACAAAATTCTAATTCTTAGTTATTTAGCTAGTAGTAGTTTTTCTCAC ATGAGTATTTATATATGCATATAACTTGTAAAAAGTATAAATAAAAGTAT AAAATTGTCAATACAATAATAAACACGTTTCTTCCAAGAAGACTCATTCA ATTTTGGCTACGAGAAAAAAATCAGTATATAACGGCGTGCTATAGCTATC CAGCAAGTAACTTGCAACATCCATCATCATTATATTTATAGGAGAATTAA TACCCTAGGCTCTAATAAACTTCTCGATATTAAAGTTTAAATTTCAATGT AATTGATATGGTTTATCTTTAATTAATTCTTTTTTCTTTGCTAGTAGTAA AAAAACAAACAACAACAACAAACAAATTAACAATAAATATCTAAAGAAAT GAGATTGGCAGAATCAACATTGTTGAAAGTCGGGTTTTGGTGATTGGTTT CTGGACCTTGTTTTATATACTTCTTTACCAACAAGAAATGAATTCATTTG ATTTTTTTATAAGACACTATGTTATAGTACATGTTGTTACTTGCTATTAT ACATATTATAAATGTGGTACCCTTGAATATAACGGTAGTTCGGGCATTGT TGCACCAATGTATACAAATAAAAAGCCTGAGTCAGATGACTTGTACTGTG TATACAAGATCAATGCTAACCAGTTCAATTCCGACAATATCAATTTTATT ACCTTAACATGGTCCAGATTTGATATACCATCAAACATGCCAGATTGTTT CAATAATTTCGTGCTAGTCTCAACCGGGTAAGCTTTTTGTTGATAACATA CAGTTTTCAGCTAAAAAAGTTTATAAATCTTTATTCATTCTGGCAGAATT TTATTTTATTTATTTGAATATAATCTAGATTTCACTTTTCACCAGAATTT TATGCAAACATGAACATTCAGATATTTTGGTTTGTTTTCTTTTTCTTTTA CAAATGAAAGGCAATTTAGCTCTTTCAAACTGTTTGACTTCTATTAAATT GTTACCTTGTTACTTTGAAAAAACATATTTGAGGGGATCGTTTGTAAAAA GAGGGCATTTGTTACATAATTTTGAAAATTTTACATAATTTAATAAAGCT AAGGACCTTGTTTTTACCTTCCCGTTTATCTATTTACGCTCAAAATGTCA TTTTAAATACTAAAAGAATACAACTATCTAAGTTTCCATCTTAAGACACT TCTAACTACTTTTTTTGTTCAAATAAACGTACCGCCTAGAAGGGAAAATC TTTCCTCCTTCTGTTAAAAATTGCAAATATATATTTTTTAATTTGGCCAT AACTTTTGATAATCTGAGTGTACTTAAATTCTCTTGTAGTTGCAGGAAGA TTGATCTTTTAAAAATACAAGGATCTCGGGAGATTCCCCTTATTCTAAAA GAGAGAAAATTTTGTGGCGCCCGAAACAGTACTTGAATTTTTGTTATTAC CATAGATGTGGAATTAACAAAGAAGAAGTTGGAAGATTTTGTTCATTGAA TTCTGACAAGCCTTTCCCGATTTTATCTCGTGACGGTTGTATTGAAATTA TTTACAGAATTTCAAAACAAATTGCTAACACGCCTGTTCAATTTAAAGCA TATTATGACAATGAAAATCTTTACAGATATGGTCTTGACAATAAATGGTA TGAACAAATTTTCATTTATTTGAAATTAGGACCCCTTCCTGATTCCCAGT CATTTGAAACAACTGACATATATGTGCCAAGCTGTCAACAACAATCATTC ATGTTTTGAGGTCTTCATATTGAATCATTATGAAATAGAGAAATAGAAAC TAGGCTAGCGGAATTACTCCTTGATTTACGAATCACATTTTAAATGGGTT CCTTATAAATACTTAAACGTATTAAAATATTATAATTAGAGGAAAGTTCG GCCGTTGCAGCATGATTGCATCATAGGGTAGTCGACAATAGGAAATGGGT GCCCACACAACTACAAATAGTTAAAGGATTTTGAATTAATCCCAAATAAT TTATGTCCTTGAGTTGATTAGTGGATAATTAAATTAGATGAATTATGGAG GAAATTTTATCCCCTGAAATTTAGTTCCATTACAATGAAGCTCTGTTCTG TTTTCTTTTGTAAACGCTGCCTTACCAAGCATATATTGATTATACCCTAT TCATTTAGCCCTGGTCCTAAGCAAGAACTGACTTTGTCAAGTGGTCTAAT AGCAACACCACATTGGCCAGACCCTTACAGAAGTCGAGTTAGCTACACTG AAACCTGTGAATGGCGGATCACCCCACAACGTACACATATGATGATTGTT ATAATCGATTTAGACTTATCTCAAAGAAATTTTATTAAATTGAAGTATTA TAGTAAGTATTATTAAAATATATAACAATTTCTAAAACCAAGAAATTCTG CACTCTCTGACTCGGTAGTCTTTAAGACTCTCGACATTCCAGACTTCTTA GTTTACTGGTGTGTCTACTATTCCTATCATCGGTTGTTTATAACGAACCT AAAAGTAAAATCAACTATGTTTTACGATACCTGAAGAAGTTCAGAAGTCT CGTAAAAAAAGTTGAATTACTTTTTTGTTCGTTATATTTACAATTTGTTT CTCTTGCTTTACCTATGGTTGTTTCACACACGTACACTATCAAAGCATTT CTTGTAATTTTAGATACGAAAGATTACAATCGTTGGACTGAGAAAAAGCT GTATGCTATTTACTCTGATTCAGAAAAACTTTATGCAACTTCAAGTTTCA CAGTGTTGTTCAAAGCTTATTCAAACCATCAAAAAGAAAACAGAGGATTT CTTATTGGTTATATGGCTTACGGGGATGAAGGTATAAGACCTAATGTACA CGTGTCATTTTTGGACCTACCTCTGGGTACCCCGGTGGAGGTCCTTTAAA TTAAACCATGTTCGTTCGTTCCTTCGTTCGTCTGTTACCAGCTTTTCTCG CGGGATTGGCTCATTACCTTTTTCTGTTTTTTTGGCACAATGATGCAAAA TGATGATTCCTAAAAAGTGACGCAGCCCGATTTTCGAAAAAAAAATTTTG CCGGAAAATCTGTTTTTTTGGCATTTTCTCGAGATTTTATCATTAGTTTT TTCTTATTTTTTGCTCAAAGATTAACAATGCCCAACAATGCCCAAAACAT GGCCGAGTTCGATTTTTGAGAAATTTTTTTTCCCGGTGGAAAATGCCGGA ATTATGCCGGAAATCGTCGTTTTTCAATATTCAATATTTTCAATAAAATT GATTTTTGAAGCCGGAACTATTTAAAAATCGCTGGAACAACCTATTTTCG CCGGAAAGACAGTTTTTCTTGAATTTCTTGAGCTGTACTTTATATTTATT TATGAAACTTTGCACACTGATGCAAAATGACAATACCACAATTTTTCACA CAAAATCATTATTGATAACAACCCTCACCATCAAGCATGATTCAATTGTC AATAAAACTGATTTTTGCGACCAGAACTTTCTATTTATTTTTCCCTACAA CCCTACCCTCTCCCACCATCAACAATCAATGATGAAAATTTGGCAGTATA AAATGTTGACTTGGTATAGGCTTTGAGAGGTTGACTTTTCTTTCGTCAAA ATTGAGGAGCGTCGAAAGTTGTTTTTTTATCATTTAAATGACGTCAATTT GCTTAAAAATGCAGCCATTCCAGGCTCAGTATTTTTGTTTCAATTTGCTT TTGGAGTTTTTAGCTAAACTGTTCTTATAAAATCAATATCGTTTTTTTTA GTGACAACTACGACTGTTGCTCCTACAACTTCATACGATGACGAAGAAGA CGAAGATTTTTCCTCGTCATCATCTTTCATTTCCATCATGGTGCTTGCCA TATGTGCGGTTATGGTGTGTCTCTGTTGTTTATATTGTAGGGTTAAGAAG GGTACAGGTGGGAGTAATGGTGAAGTCACAATACCGATAAATACACCTAG TCCTAATGAAGATGAAGATGAAGAACTAAATCATATAGACCAAAGAAACT CGATGACTAGTGTAAACAACACCAATGGAAATTTAACTGATACTCAATTG ACAGGTGAATTATATTACTTTTTAGACTCATAACGTCCTTGAATCGCGCC TTCGTATCTTAGCAGGATATGGAAAAAACAGGACCATATACGGCTATATT GCTTTCATACATTTTGAATAGGTTCCTTTTTGGGTATAGATAGAAAGAAG TGTAGGGTAGAAAACTTTTTGTAGTACAATGATAGTTCTGTACGGTCCCT GGACCATAGACTACGACAGGGTCCAATTTTGCGACTACTTGTATGTATAG AGAACATGGCAGCACTTCATGCTAATCTCCAAAGCCGTTGAAATACATTG TAAGGTAGTATAGGTCAACAGGCGAAACTATATATTTTCAAAATAGTGCA GTGCCGTAGCAACTGGGGGGGGGGCAAGGGGGGGGCTATGCCCCCCAANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNATCCTGTGCCCAAGTTCAGGAATTGTCATAAAGCCATTATGG TAATAACCGGGAGGGCACATTGCTATACATTGTATTTTGCAAAATGCAAA GTTTTTCTTTTTTAATTTGTCATAATTGTCACAATTGAGTGCATTTTCAA GCAATCTAGAGCTCAAATTTTCAAAATTTCCCTCCTCGGGCCAAACCATG GTTGGCCCTCGCGGTGTCACTAAACTTCAGCCCCCCCAATATGGAAATGC TTCCTAAGGAACTGTAGTGTACCTTGAAGGAAGAAATTTTGGCGGGAATT TAATTTGGCGGATGGCCGAAAAAGTTTTTTCAGAGGGAATTTAATTTGGC GGTTGCAGGATATTTTTGGCCAAAAGCGTTATTAAATCAACAAAAAACCT GTTTTAAGGTTTGAAATACATAGCTTCAGCCAGGTTTCTAGCTCTCCCCA ACAAAGTAAGGTCCCCCCAATGGTAATCTTAGCCCCAGGTACTTTAAAGG CCAAAATATTTCTTAGACGAGATGCTTTTAAATCTCAGCATTTAAAACTT TGGTACAAAAGGTCTTCATACTTCACTTTTTCGTTCTTTTTCACCTTTTC AGACGAAACACCGCCAGCCTACAATCCACATTCCAATTATCCATCTGCAC TACCACGATCAAATCGTTCACCTCAAAATAATATCAACGAAGAGGCTCCT CCACCATCTTACGAAGATGTTTTGCAGGGAACGTATGGGCATAGTATGGC ATAAAACATTTGAAATTTTTGTAAATATGATGATATAGTACCATTGATCA TTTTGTGAGACGGAAATCTTTTTTAGACTTTCCTGGCTAGGCNCCATTGA TCATTTTGTGAGACAGGGAAATCTTTTTTAAACTTTCCTGGCTAGGCGAG ACCCAGTTTGCAGAGTGTGGTACGTTTGCTGGAGATCTCGAGTGCACCAC TCGGAAAGAGTCGAGTGCAGGTGCAAAATTTGAGGTTTTCACGTGCAAGT GCAGACGGTTTTTTGACCCCAAGTGCAGCTAATTTAACAATTTTTTGCCT TTTTGGGCCAATTTCCGAGGTATAGGTGCACCTTATCCGGACCAAAATTA TCAGGTTTTTCCTCGAGTGCAGCCTTGCCATTCTTTGCAAACTAGGGCAA TACCAATTTAATTTGCTGTTCTTCGGTCCTGGCTGACTAAATGAAAGATT TATTCTTATTTTACCGACCGACTGACCCATATTTTTTTAACGATCTGCCT GTAGAACAGCAAATTAAATTGGTCTCGCCCTANCGACCATATTTTTTAAC GATCTGCCTGTAGAACAGCAAATTAAATTGGTCTCCCCCTAGATGAAACA TTTATGCAGCCTTTGATTAGGTCACAAAATACTCTTCTTTCAGTTATTTA TTATTCATGATCAAAATGGTCAAAACAAAGCTTCAAGACTAGCTTTTTTA AACGGAACGCGGACACACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018214TCONS_00018214Clytia hemisphaericatranscript
TCONS_00018213TCONS_00018213Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018213-proteinTCONS_00018213-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:129274..136142 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.9 1.42 0.68 0.65 1.92 1.61 1.74 2.12 2.05 1.21 2.14 1.68 2.31 1.93 1.61 2.9 2.26 2.37 2.04 2.82 2.78 2.63 1.67 1.91 1.95 2.6 1.13 0.49 0.98 0.87