XLOC_010239 (gene) - C. hemisphaerica

Overview
NameXLOC_010239
Unique NameXLOC_010239
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:137240..145082-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010239 ID=XLOC_010239|Name=XLOC_010239|organism=Clytia hemisphaerica|type=gene|length=7843bp|location=Sequence derived from alignment at sc0000291:137240..145082- (Clytia hemisphaerica)
ATCAAATAAAATTAATGTATTTATTGGAACTTTTCATAAGATACAATGTC ATAATACATTCAATCGTTAGTTGCTATCTGAAATGTGGTACCCTTAAACA TACCTATTCGTCAGGCTATGTTGGACCAGTATTTATATACGGGAAGCCCG ATACAGAGGACTTATACTGTGTTTATAAGATCAATCCTGGACAGTATTAT CCTGAGAGTAAATCAGGTTATCTTTTAACATGGAAAACGTTTGATGTACG ATCAAACATGCCTGATTGCTTTGGTAATAATGTACTAGTTTATACAGGGT AGGCTTTTTGTCATTTTTTTGTTGCACCTTTTCACAATGTTCCCATTGAA TTTCATACACACTTGTCATCTAGAAGTCAGTTGTCTTTGAAACCTAAATT TCAAAAATAATTTGATAATTTGATGTTAGTTGACTTCAGAAATCATCCAG TTTATCAAGATTCTACTACTATTGACTCGAGTTTTGATTGATGTAAAAAA ATTAAGAATGCTTTTATTTTATGTGATTTGATGATAATATTCCAATTATT CCAGTTTGGTACTGTCTCAAGCATTTTTTTACTTTTTTAGATGTGGGTCT AACCAAAAAGAAATTGGATTTTTTTGTTCATTGAATGCTGATAAGCCATT TCCGATATATTCACGTGAAGGATGTTTTACCATTGTCTATAGACTTTCAA AACAAGGGCAAGGTGGTGAATTTACTGCTTTTTACAAGCCTATTGACGAC AATAGACTCGATGAAATCTCCAGTGATTGGTATGTAATATTTCTTCTTCC TAGAAAATGAAGATTTGTTTTGTTTCTTTCATTGTTACTACTTCTAGCCG TTTTTTTATCAACCCTTCCAACCCGCGGCAAACCCGGCTATAACTCCTGA CCACTTGATATAAAAGGGCTTATAGAAAGTAATTCAAAATACCTTGCAAC TTGTACCAAAATCAATGTCTAACTCCCCAGTTAGCTGTTCTAACCCTCTG AGGATTCCTGTGCCATTGGTTGTTTTAGTCAGCTTTTTACAAACTTTTTT ACAACCTCTTATAAAATGTGCTTTAATGAAATACCTAATTTCGATAATTT CAACTATCGCAAAGTCTCGTAAAATTCGAAGTTAAGATTTTATCAAAAAT GCCCAGTTAAAAAGTTTTTTTGACCTGAAGATTACCTAATTGAATTTCAG TTCATAAAACTTATACTTTTTAGGTACCTATACTTATGTTAGGTATGAAA AAATCATTTTCTTCTTCTTGGTTAGACCCCAAAGAAATCGTAAGGCCCTT GAAGTTCTATTTGAAAGCTCATTATGGTAGTGGATAATAAAATTGACTTT CCCAAAACATGGTCATATTGCATACCAGAATGTTTCAAATTTGATGTAGA TTTAGAAAAACATTAGTACCATACGTCAAAAATGAGGTCAATGAATATTT TGACCCTTCAAAGCCGTTTTTTGACAAAAAACAGGCGCAATTGCATTAGA CATGAAGTCCTGAGTTCGAATCAGTAGAAGTAGGGTATAGACATCTCTAT AAATAATATTAATGAAAGCAAAGAACAATTATAGGATCAACGTGCTAAAA TATATAAGAACAGGCAAACCTTAACGAATATTAACCCTTTCAGTCCCACG CGACCGCACTGCGGTCCCTTTAGACCCGTCGTTTTTTCCCAGAGGACTGC ATAGCGGTCCCTGATTTATTTTTCAAATTGTGATGTTTTGGCGGGAAATA AAGAGATGTCTTTAAACAGCTTTCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCTATCAA TCGTTATGATTTTTCTATGAGGGCTAATCAAACAATTCTTTTTTCAGTTA GTAGATACTGTTGTGCTAAACATTTATCAGAAGAATGAATGGGTTTAAAT TATTTTTTCATAAAAAAAATTACAATTGAATGGCAAAAAAATGCTGTTTT CAAATTATTTTTTGCCTTTCTCTGGTCATGTGACACGCTGGTGACGTCAT TTTGCAAGTTTTTTTCTATTAAAATGATCCTCATACTATAAGTGAAAAAG GGTGAAAACTTGAGAGGACTAGGNTTTCTCTGGTCACGTGACACGCTGAT GACGTCATTTTGCAAATTTTTTTCTGTCAAAATGATCCTCATACTATAAG TGAAAAAGGGTGAAAACTTGAGAGGACTAGGTTTAGTGATTCCAGAGATA TTGAAGCATGAGTAAATGCATTCAAAAACTCATTTTACGGCTCTGGGAAA GTAACTGTGAAAACTCTGGGACTGAAAGGGTTAAAAACTGGCTCTTACAA AAATAAGGACATAGTTGTTTGAAGAAATTATCGTGTTCCAACTTACGAAC AGTTTTTACTTTTTGCCCACAGTCCTTTTCTTCGCAAAGAGCTGATTGCA TCAAATGGTCTTATATCAACACCGTATTGGCCAAGTCCTTACAGAAAAAA AGTAGGATATCAGTATTCACAATCGTGCAAATGGGAAATCGCTCCTGAAC ATACAAACATCGTGGTTGTTATAATGGATGTAGATTTTGCTTCGGATAAG CGTCCTTCAGCTCTATCAAGTCGTAGAGACGTTTTGAAGCTTGGATACAG TCTAGACAATAAACGAGAAGGAGTCACTTGTAAGTCGAGCATTTCTTGCG CATGGCTTCAAATTGGGATACCTGGCTCGAATCTCGCTCCCGCTTTCCGC GCCAAGCCAGTTGGCCGTTGACCTCGTCAAAACAATCCAACGACTGTCTA AAAGTCCTAGACTATAAAGCCCCTGAACGTAAATATCGACTTTATCATGT TAGAGTAAAACTCTTTATGTTAGGTATATGCGATCTAACTTTCCCAGAAA AGCTTTGGGAGAATTTTTCTTTAAAAAAAATTGTCCTATTGACTTTGATT TATTTTAGACAGCACTGAATACAGCCATTGGATTGAGAAGAAGCTCTATG CAAAAGACGAAGACACTGAAAAATTGTACACGGCTTCAGGTTTCAGGGTG ACTTTCAAAGTATATGAAAATCATTATTTGGATCACAAAAATGGTAGAGG GTTTCTGATTGGTTACATGTCTTACAAAAAAGGTAGCTTAATACACTTCT TTCTGGTGCAGTGCAGTCTCTTTAACTCGAACCTCTAACACTCGAATGTC TCGAACAAGTTTTGTCGTCCCTTATTCAGTGAACAGCGTCTTATAAACCT TACTTTGTTGTGTCGTCTATCTTCAGCATAATTATGGCATTGTGTGTATA TGTATACAATTAAAACTAAAATATTTAATAAAAATGGGAATTTCATACAA AACTTTTGAGGTTTAACATTAGACTTGAGGATCACAGGATCATAAAGCTC AAAATTGTTCCAATAAGGCAAAGAAGAGTAGTAGAAAAACCTTAAAGCCA CTAAACTCCTCCCAAATCGAAATATCCGGTGAAAAAAAAGTTCTTAAATC GCAATGCTCGCACAAACTGTAAATTCTGAAAAGCGTTTAAATACTCAAAA TTTTTAATAAATTTTGACATTTAGACATTCAGGCACAAATGAAATTAACA AGTAATAACATGAATATGAATTAATAATTTCTATATAATATCTTCTTTTA TTTCATAATTTTATCTTTCAGTGACAGACTCGGAAAAGAAGGATGACGAC GATGGTCTCTCTCCTTTCATCATTTTTGTCATTGTGGCATGTAGCATTGG TGTACTTGGTGTTTGTTCGTGGTATTGTAGCAGACACTCAACACGAAGAA ATGAAAATGCTTCAAGTAATGAGTTAAATGAGGAAGAAAGAAGATCCTTG AATAGACCAAGTCCTAATCTACAACCAAGGTTAATCATTCATGTCCGTCA GGGTGATCAAGAATTGCATCATATAGACCAGAGAAACTCGATTACTAGCG TAAACCAGACTAATGGAAATTTACCTGATGCTCAATTATCCGGTAAGTTA TATTGCTTATCATATTATAAATTATAGGCGTATTGGTGTGGTGGCTATCG CTCTTAACTCCCGTCTGGGAGGTCCGAGTTCGATTCCCACTGTAGTACCA CGGTTCACTTGACAAGTGAACACACCTTCGCCCGGGTCAACCCATACCAT GTGAGGGGAATCGGGTACCACTACTCTGATGCAAGGGTGTGGGTGATATG CCAGACATTGTGGTGTGTGGTGTCACTCATCCCGTTCTGCGCCTGCGACA AGCTATATGCTCTCCCGCGCAGTTCGAATGTCATCGCTATGAATCGTGGT AATTGTGTCTCGCGTGCACAGAACCAGCGGTGTCTGTACAACGCTAAGCG TTCCAACTTGGAAAAGGAGGAATTCCTACTTCGCAAGGAGTAGGACGCAT AGATTTAAAAATCCCGAAGGGCTAGATGGCGTACTTTTGCTGAGAAGTGT GCCGTGGTTAGGTAGGAAATTCTACCTAAGTCAGCGATGGCTTAAAGCAC GACATCAAGTCCTTCAGGCTTTATAAATCTATGGTAGAACCCATTCCCCA GTGGGGAGGGCTCATATCATCATATTATGAATTGATAGAGTTGCTAATTT CGTTTTTCCTTTAATANACTTATGTTAGGTATGAAAAAATCATTTTCTTC TTCTTGGTTAGACCCCAAAGAAATTGTAAGGCCCTTAAAGTTCTATTTGA AAGCTCATTATGGTAGTGGATGATAAAATTGACTTTCCCAAAACATGGTC ATATTGCATACCAGAATATCACAAATTTGATGTAGATTTAGAAAAACATT AGTACCATACGTTAAAAATGAGGTCATTGAATATTTTGACCCTTCGCAAT TGCATTAGACATGAAATCCTGAGTTCGAATCAGTAGAAGTAGGGTATAGA CATCTCTATAAATAATATTAATGAAAGCAAAGAATAATTATAGGATCAAC GTGCTAAAATATATAAGAACAGGCAAACCTTAACGAATATTAAAAACTGG CTCTTACAAAAATAAGGACATAGTTGTTTGAAGAAATTATTCTGTTCCAA CTTACGAACAGTTTTTACTTTTTGCCCACAGTCCTTTTCTTCGCAAAGAG CTGATTGCATCAAATGGTCTTATATCAACACCGTATTGGCCAAGTCCTTA CAGACAAAAAGTAGGATATCAGTATTCACAATCGTGCAAATGGGAAATCG CTCCTGAACATACAAACATCGTGGTTGTTATAATGGATGTAGATTTTGCT TCAGATAAGCGTCCTTCAGCTCTATCAAGTCGTAGAGACGTTTTGAAGCT TGGATACAGTCTAGACAATAAACGTGAAGGAGTCACTTGTAAGTCGAGCA TTTCTTGCGCATGGCTTCAAATCGGGATACCTGGCTCGAATCTCGCTCCC GCTTTCCGCGCCAAGCCAGTTGGCCGTTGACCTCGTCCTAACAATCCAAC AACTGTCTAAAAGTCCTAGACTATAAAGCCCCTGAACGTAAATATCGACT CTATCATGTTAGAGTAAAACTCTTTATGTTAGGTGTATGCGATCCAACTT TCCCAGAAAAGCTTTGGGAGAATTTTTCTTAAAAAAAATTGTCTTATTGA CTTTGATTTATTTTAGACAGCAGTGAATACAGCCATTGGATTGAGAAGAA GCTCTATGCAAAAGACAAAGACACTGAAAATTTGTACACGGCTTCAGGTT TCAGGGTGACTTTCAAAGTATATGAAAATCATTATTTGGATCACAAAAAT GGTAGAGGTTTTCTGATTGGTTACATGTCTTACAAAAAAGGTAGTAATAC ACTTCTTTCTGGTGCAGTGCAGTCTCTTTAACTTGAACCTCTAACACTGG AATGTCTCGAACAAGTTTTGTCGTCCCTTATTCAGTGAACAGCGTCTTAT AAACCTTACTTTGTTGTGTCGTCTATCTCCAGCATAATTATGGCATTGTG TGTATATGTATACAATTAAAACTAAAATATTTAATAAAAATGGGAATTTC ATACAAAACTTTTGAGGTTTAACATTAGACTTGAGGATCACAGGATCATA AAGCTCAAAATTGTTCCAATAAGGCAAAGAAGAGTAGTAGAAAAACCTTA AAGCCACTAAACTCCTCCCAAATCGAAATATCCGGTGAAAAAAAAGTTCT TAAATCGCAATGCTCGCACAAACTGTAAATTCTGAAAAGCGTTTAAATAC TCAAAATTTTTAATAAATTTTGACATTTAGACATTCAGGCACAAATGAAA TTAACAAGTAATAACATGAATATGAATTAATAATTTCTATATAATATCTT ATTCTTTTATTTCATAATTTTATCTTTCAGTGACAGTCTCGGAAAAGAAG GATGACGACGATGGTCTCTCTCCTTTCATCATTTTTGTCATTGTTGCATG TACCATTGGTGTAATTGGTGTTTGTTCGTGGTATTGTAGCAGACACTCAA CACGAAGAAATGAAAATGCTTCAAGTAATGAGGGAAATGAGGAAGAAAGA AGATCCTTGAATAGACCAAGTCCTAATCCACAACCAAGGTTAATCATTCA TGCCAGTCAGGGTGATCAAGAATTGCATCATATAGACCAGAGAAACTCGA TTACTAGCGTAAACCAGACTAATGGAAATTTACCTGATGCTCAATTATCC GGTAAGTTATATTGCTTATCATATTATAAATTATAGGCGTATTGGTGTGG TGGCTATCGCTCTTAACTCCCGTCTGGGAGGTCCGAGTTCGATTCCCACT GTAGTACCACGGTTCACTTGACAAGTGAACACACCTTCGCCCGGGTCAAC CCATACCATGTGAGGGGAATCGGGTACCACTACTCTGATGCAAGGGTGTG GGTGATATGCCAGACATTGTGGTGTGTGGCGTCACTCATCCCGTTCTGCG CCTGCGACAAGCTATATGCTCTCCCGCGCAGTTCGAATGTCATCGCTATG AATCGTGGTAATTGTGTCTCGCGTGCACAGAACCAGCGGTGTCTGTACAA CGCTAAGCGTTCCAACTTGGAAAAGGAGGAATTCCTACTTCGCAAGGAGT AGGACGCATAGATTTAAAAATCCCGAAGGGCTAGATGGCGTACTTTTGCT GAGAAGTGTGCCGTGGTTAGGTAGGAAATTCTACCTAAGTCAGCGATGGC TTAAAGCACGACATCAAGTCCTTCAGGCTTTATAAATCTATGGTAGAACC CATTCCCCAGTGGGGAGGGCTCATATCATCATATTATGAATTGATAGAGT TGCTAATTTCGTTTTTCCTTTAATAAAATAGCCTTCTTTGGGAAGTTTTC CCCGATAAAGCATAGTACTTTTCTTAACCTTATCTTTGTTTCTGTATTCT AGAGGAAGCACCACCAGCCTACAATCCACATTCAAATTATCCAACTGAAC CACCACGATCAAATCGTCCACTTCAAAATAATATCAACGAAGAGGCTCCT CCTCCATCTTATGAAGATGTTTTGCAGGGAACGTATGGATGATATGAGTG ACATTTGACGTATGAGATATATATCCATCTATTTTCTACACACTTAATTT TTATTCTATTTTTTTGTATCTCTATTTATGAAATGTTCAGTATCATTAAG GGTAAATCAATAATAATATGAATAAAAAATGAATAAATAGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018218TCONS_00018218Clytia hemisphaericatranscript
TCONS_00018217TCONS_00018217Clytia hemisphaericatranscript
TCONS_00018216TCONS_00018216Clytia hemisphaericatranscript
TCONS_00018215TCONS_00018215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018216-proteinTCONS_00018216-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:137240..145082 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.55 3.7 2.59 2.5 5.18 3.52 5.77 6.24 4.85 4.49 4.88 4.26 5.27 4.79 2.09 2.77 6.34 7.01 4 5.05 11.07 10.58 3.7 4.9 10.24 6.95 2.99 1.57 1.97 2.1