XLOC_010263 (gene) - C. hemisphaerica

Overview
NameXLOC_010263
Unique NameXLOC_010263
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000295:225769..230892+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010263 ID=XLOC_010263|Name=XLOC_010263|organism=Clytia hemisphaerica|type=gene|length=5124bp|location=Sequence derived from alignment at sc0000295:225769..230892+ (Clytia hemisphaerica)
TTAgggaaaaaggggaaaaaagaagaatataaaatataaagaaagaagaa gagatATCTTCTTTTTTGGGCTTTCTTGATGATCttttttttctggtttt tcGAAATCGCATCAAAAAAGATAAGAGAATATTTTGGGGAAGACGTGATC GTATCATAGCAATCCATAGATTTGATTTTGGACCCATATAGTTGTTTCTA GAAGCTGATCAAAGACTTCCAACTACTATTACTTTGCTTTGGAATAACTA AAGTACTTATCTTATCATCGTATCATCAAGCAAGGTAAAGCCTGGTCTCT AAAttcacaacaaaatcaaacaaagagaCGACTACTTACCTGAATTGCTG AGGATGTGAGGACGGATTTAGTACGCCGTGCAAGCCCTCTTTGTAGAAAG GATTGATGTAATCAGGTAAGTTTTGCCACATATAGCCCCATAGTGAATAC GTTCGTCTATTGAGCCTAAAAAGAAAGTTGAACATTTGAACTTGAACTCG CTGATTCTTTCCATAAAAGCTGGGCCAACACCCTTCCTTTATTTTGTGAA AAGGCTAAGGGCGCATATATCCTTGCTCTCCGCCATTTTGGTCTTGTGAC ATAAACGAACCTGAAAGTTGGATTTGGAACGTTTCTTAAAATTCTATTTT AACAGAATATCCTCGAATCTTGTTAGTAAACTCTtgtaattcatgatatt atatTACCCTGAAAACGTTTTACCAATATGAAAGATTCGTATCAGAAGCT AAAAGCCGAAAACCAAAAGCTCGCGCAAGTAATGACGCATCTTTTCCAGA GTTTACtttgagaagtttgaattacgggagGGATGTATGACTGATTTTTA TTGAGAACTTAATTCACTTTTCTAGCTCATTTTAGTCATTCAAATAAAGT GGTCCGTGCTTAATGCTTGTTGCAAAGTCTTGAGTAAGTAGtacaacccg ggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNccacgagtcccaggtagggtcgcaaaaacaccaa aatagaaaaatcagtccctcgtagggtgcctttttttggaaaatttggga aaaaagtagaaaatttgggaatttcagtcccattcagggtcacttttttc gctaatttcgagtcccacgtagggtccatttttcgaacctcagcggagca cccccgtcggtcgacaagggtagtacccccccgggagtACAACATTGTAG ATTTCGTCAAATATTTCGTCAAATATTGTCAATTCTTCCCCGAGTGTGCC CAGAAAGAAAATTACTGAATAAAACCATTCTGGTTCTTTGACGGAACTTC GACTGAGTGTTTTGGACCTTTAACGACTttgtaaaataatatttttgatt gccaTTTAGCATGGCTTCAAGTGTTAAAAGTTTCGGAAAATACACTGCAA ATTACAGTTCGTTTGTTACATTTGTTGCCCGGTCTACATAAGTATCATTT AAGAACATCTGTTGAATTTTTCAATATCGCATCATTGTCAAGTTTCCACA ACCCGAATGCCAATAAGGCAAGCGAGTAATCGTTCAGGTCATAGAGAGCT ATCGAAGTTAGAGGGAAACAGTTAGTTTGGCCAGTAGAGTAGTTCTAGTA AAGATGCGAATGAGGTTCGAATTATATGTAGAGACTCGACTGTAGGAAAG TcgtaaaaataagaaataaatgaTTTCAATTTTAAGAGGTGTCAAACAAA AGTGGTTTGCTAAATGTTGTCCTTACCAGGATTTTTGTTCAAATCTTCTT ACATAATTCAAGGAGGAAAACTGACCTCACAACAACACTCTATTAACCTT TCACTGACCATAATTGTCCTAAATGACTGAGAAAACACACTTAGAGGTCA TGAAGTAGGATGGCCTAAAGTGCGTCAAGGGGTTAAACTAAAACACAGTC AAGTAGTAAATCGGATTCTCTTTGGAGAGAGGAAAAAAAGAGGTACTTGT GAAATGTAGTTCTAGATATTCGTGACAAGTCTCACCTCAGTTTTTAAATA GGACTCCTTTATTTAATTGCGTACTCCTAAACTGAAACCacaacaagaat tttttttggagacttttgcttttatttttctaaatgaCGTAGAAAGGGTT AAGGTTTTTGGTTTCAAAACATCCAAGTTCTTGATGGTTGGTGCTGAGAG TATAATGTTTTATTTCTttggaaaaataaaatcttttgcaGACTTTGAAT TCTGAGTGAGCTCACTGAACTTTTGTGAGGAGGATCTATTCAGGTCACTC TTGGAGTCTCGGAGAAGTTTGAAGCGAAACAGATGAAGTTATTCCTCAAC ATGTGAAGATAATTTTGAATTGTTGCTAGTTTTGATAGTTATATCGTGAA ACCCGAACCNGAAACAGATGAAGTTATTCCTCAACATGTGAAGATAATTT TGAATTGTTGCTAGTTTTGATAGTTATATCGCGAAACCCGAACCAATTTG TTAAAATGGGTAAAATGACAGTACATAGATTGTTCGAACGATAGAAATTT AGTATAGTTTCATGCGTGTAGCCTGTGCTATTTGGCCATCCATTATCTGT ATTATTGAGTGTGGGAGACATAAGAATTGGTCGAAAAAGTCTAAAGTCTA AAACCGTTCAAGCTTGAAACATGATAGTTTTGAAGATTCGAGTTATGATG ACTCATCTGCAATGGAGAGAATTATTCTTTGGGACTTATAAGCTTTCTAA ACAGATGATTGACGTAAAAAATGCTTGGTTAATCTAAGTGCGGAATCGTA AAGCTATATCTACCGGTAGCCTTTGAAAAATGATAAACATTTTCTTGGTT TTTCTGATTGAGATGATCTAGTTACTAAGTCGATTGTTGTGTTTCATAAA CCTCTgataaaatcttttcaaatcgCCTTTCCAAGTTGATTGACATGATC ACTGAACCAACTTTCAACTTTGCGTTGAAAGTAAAAAGGAAACAGTAACA ACCATCTTAAATGTGTTTCATGTTGCTTCGGCCTTTGCCGACCTTCGCtc gaaaaaagatatttgtaTCACAGATGGCTCTCGCCAATTCGAACTCGAAT TCGAACTGGGAATCTAGTTTGTTCGAATTcaagagagattcgaattatag aaagtattttaagagggtttctcctttACGGGGCTggaaaaaagttcgaa ttatagagagattcGAATGAGTTTATTGTATCTCTCTTCCCAGCTGACTT TTAGTACTTTATCTGTGTAATATCTCCTCGATCAGAATCAGAATCAAAAT CAGCAGGATAATGATTACAGTATTTATCAATCAAGAGCATACATTCCGAA AGGCTTCTGTTTTCTTGTATTCTAGTTAGCTGTTTTTGTCACATGATGCG ATTCACCGATTATTCAACGTTACTAGAAAAGAGCTGGGTTCTAGAGAAGT ATCAATTGGATTAGCATTATTCTAGTCCAAAGGTTTACTTTTTATACAGT AAAAAGGGGAAGGCTCGTTCAAACAGGTTAAAATCTCACGTTaagaattt tctattttgttttaggatttcgaaaaaaaaaagagaagaagaaaaCCACT CGAAAAAATATTGCTCAAGAAAACACAAGATACGAAATTTTCTACTTCCA TTAGAGTGACAAAGAGCATCCCAGTACCGACGAGATGGTTAGCGCATCGA ACATTTTGATGATCTGTTTATTTATTACACTGGTACTACTCATGATtgtt tacgccattttgaaatgTCGCGTCAAAAATGAATACATTCGAAAGTTGGA ACAAGAAGGAGACCAATATTTGACGAAAAACGATTTCGCGAAATGTTTAG AAGACAGTAGAGATCAAATGCTCGTTTATCTATGATGGACAAAAGAGCAA TTTATAGTAGTTGAAGAGTTTCTTAAAACATGCTTTTCAAAACACAACTA ATTGTTTGAAGATCGAATCAGGATGTCGTCGAGGTTCAATTATGCAATAC GTTCATGGTTTATGCAGAGAACTATTTCATTTTAACAATCAATGAATAAA ACATTGAACAGTTAAGTTTCTTGGAGTATGGTATGCTAACAAGCTATGTA TACAGTGGTTGACCCCGAGGACGCTTTATCAAATTTGTAGCCCTGTTGAT TATTTAAGTTCATATTTCATTGGGCGGTAATGAACTAATTTGCATATATT TATAATGGAAGCTGAACAATATGATATTTACCGCGTTGTGAAACGTATAA ACGTCTGCCTGTATATAAGATTTTGTGAATAGCACTCACTGCTTAGTGGC ACACACAATTCATACCATCATGGGTAAGATTTAGCTGGGGATATCGAAAA TGACAAAGCAAGGCTTTCAGTAGCTCTGGTCGAAACGGTAGTCAGCTGAA TCCTTCAAAATTACTGATGAGAACACGTGTGGTTACAATAATACTTTact gggataaattttcgcgtgcattcaatttcgcggttgagctcatccgcgaa attttaagattttgagacagtatttttactatttttagcCTCCCTAATTG TTGGAGTACGTATTATTAGCGCTtgtttgatgccagtaaacatgcaaaaa aaattttatttgacaCTTTTTGAATTGTGTTTAAAAACATTTCGCGGATA AATTTCCACTaggacttaatttcgcagatGACACTCAAATCTTCAAAATC CACGAAATGTTATCGCATAAAAGTATTCTTTTGCTGCATTGTGTTTGTGA TTTTCGATTGGAAAAAAGagtaaaaatgattttatttatattcGAGTTTT CAACCAGACCCAATACCAAGTCCCAATATCATTAAAATCAGGTGTAATAA AAAGCATTGTAAATTAAAACTGTATATAGTTTTTTAGGTTACTACTAATC ATTTCTTGTTTAGGAAGGCGAGAAGTTTTGACTGTAATATAATAACATTT TAAGTTGTTTGACTTAAAAATCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018263TCONS_00018263Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:225769..230892 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.35 1.04 1.2 0.27 0.31 10.96 11.3 7.24 4.82 7 5.93 1.5 1.89 1.42 2.02 2.09 2.7 2.79 2.65 12.27 9.37 5.11 7.79 3.14 3.38 0.39 0.49 0.25 0.13