XLOC_010264 (gene) - C. hemisphaerica

Overview
NameXLOC_010264
Unique NameXLOC_010264
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000295:244373..250111+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010264 ID=XLOC_010264|Name=XLOC_010264|organism=Clytia hemisphaerica|type=gene|length=5739bp|location=Sequence derived from alignment at sc0000295:244373..250111+ (Clytia hemisphaerica)
CCACAGCATAAACACAGGTAATACCAAATTTCGTAATAAAGATATACGAA
AAGTGCACACTTTGACTTGAGCAAAAACACATGATGTTGGGTAGAATATT
TCGACTCTTGGCTTTTCTGTTGGTGATTTCTAGTTTAATTCTAGCGGTAA
GGTATTTCACTTAAATATCAATATGTGCTTTTTGACTAGAAACATGCAGA
AAATCTAAACGAAGAAGTAGGAACGGTTGGGTTGATTTGCTctattaaaa
atgaaagtgcAACTTTATCTTCTTTCATAGGACGGACTTCAAATTGAAGA
CACAGAATGTAAAGAAATTCCAAACGGTCATTACTTTTGCAATGAAACCA
CCGGCCAAAAGCAATGTTATGAGAACTACTTTGGAGTGAACTGTACAACA
TATTGCAAAGTTGAAGATGGAAGCAATTTCATCTGCAACAAAATTACTGG
AGAAAAGGAGTGTTTTGCTGATTATTACGGAATGAATTGTACAACATACT
GCAAAGTTGAAGATGGAAGCAATTTCATCTGCAACAGAATCACTGGAGAA
AAGGAGTGTTTTGCTGATTATTACGGAATGAATTGTACAACATACTGCAA
AGTTGAAGATGGGAGCAATTTCATCTGCAACAAAATCACGGGAGAGAAGG
AATGTTTTGCCGATTATTACGGAGTGAACTGTACAAGATACTGCAAAGTT
AAAGATGGGAACAATTTCATCTGCAACAAAATCACGGGAGAGAAGGAATG
TTTTGCCGATTATTACGGAGTGAACTGTACAACATACTGCAAAGTTGAAG
ATGGAAGCAATTTCATCTGCAACAAAATCACTGGAGAAAAGGAGTGTTTT
GCTGATTATTACGGAATGAATTGTACAACATACTGCAATGTTGAAGATGG
GAGCAATTTCATCTGCAACAAAATCACTGGAGAAAAGGAATGTTTTGCCG
ATTATTACGGAGTGAACTGTACAACATACTGCAAAGTTGAAGATGGAAGC
AATTTCATCTGCAACAAAACCACTGGAGAAAAGGATGTTTGCCGATTATT
ACGGAGTGAACTGTACAACATACTGCAAAGTTGAAGATGGAAGCAATTTC
ATCTGCAACAAAACCACTGGAGAAAAGGATGTTTGCCGATTATTACGGAG
TGAACTGTACAACATACTGCAAAGTTGAAGATGGAAGCAATTTCATCTGC
AACAAAACCACTGGAGAAAAGGATGTTTGCCGATTATTACGGAGTGAACT
GTACAACATACTGCAAAGTTGAAGATGGAAGCAATTTCATCTGCAACAAA
ACCACTGGAGAAAAGGATGTTTGCCGATTATTACGGAGTGAACTGTACAA
CATACTGCAAAGTTGAAGATGGAAGCAATTTCATCTGCAACAAAACCACT
GGAGAAAAGGATGTTTGCCGATTATTACGGAGTGAACTGTACAACATACT
GCAAAGTTGAAGATGGGAGCAATTTCATCTGCAACAGAATCACTGGAGAA
AAGGAGTGTTTTGCCGATTATTACGGAATGAATTGTACAACATACTGCAA
AGTTGACGATGGGAGCAATTTCATCTGCAACAAAATCACGGGAGAGAAGG
AATGTTTTGCCGATTATTACGGAGTGAACTGTACAACATACTGCAAAGTT
AAAGATGGGAACAATTTCATCTGCAACAAAATCACTGGAGAAAAGGAGTG
TTTTGCTGATTATTACGGAATGAATTGTACAACATACTGCAAAGTTGAAG
ATGGAAGCAATTTCATCTGCAACAAAATCACTGGAGAAAAGGAGTGTTTT
GCTGATTATTACGGAATGAATTGTACAACAAACTGCAAAGTTGAAGATGG
AAGCAATTTCATCTGCAACAAAACCACTGGAGAAAAGGATGTTTGCCGAT
TATTACGGAGTGAACTGTACAACATACTGCAAAGTTGAAGAGGGGAGCAA
TTTCATCTGCAACAAAATCACCGGAGAAAAGGAGTGTTTTGCTGATTATT
ACGGAATGAATTGTACAACATACTGCAAAGTTGAAGATGGAAGCAATTTC
ATCTGCAACAAAATCACTGGAGCAAAGGAGTGTTTTGCTGATTATTACGG
AATGAATTGTACAACAAACTGCAAAGTTGAAGATGGAAGCAATTTCATCT
GCAACAAAATCACTGGAGAAAAGGAATGTTTTGCCGATTATTACGGAGTG
AACTGTACAACATACTGCAAAGTCGAAGAAGGAAGCAATTTCATCTGCAA
CAAGATTACTGGAGAAAAGGAATGTTTTGTTGATTACTACGGAATTAATT
GTACAACATACTGCAAAGTCAAAGATGGGAGCAATTTCATCTGCAACAAG
ATTACTGGTGAAAAGGAATGTTTTGTCGATTATTACGGAGTGAACTGTAC
AACATACTGCAAAGTTGAAGATGGGAGCAATTTCATCTGTAACAAGATTA
CCGGTGAAAAGGAATGTTTTGTTGATTATTACGGAGTGAACTGTACAACA
TACTGCAAAGTTGAAGATGGGAGCAATTTCATCTGCAACTTGATTACTGG
TGAAAAGGAATGTTTTGTTGATTATTACGGAGTGAACTGTACAGCATACT
GCAAAGTCAAAGATGGAAGCAATTTCATCTGCAACAAAATCACTGGTGAA
AAGGAATGTTTTGTTGATTACTACGGAATGAACTGTACAACATACTGCAA
AGTTGAAGATGGGAGCAATTTCATCTGCAACAAAATCACGGGAGAAAAGG
AATGTTTTACTGACTATTATGGAATCAATTGCACATTAAATAAACGGAGA
CCTGCAAATAATGGTAAATGTTTATTGCCTTCTTTCAACAATAGacttta
tcggagtttttgatttttcttaaaaagcgatgcattgtgggattgtattg
agtgtattacaatagaaatctctaaGGAATTCCTTGAGGGCATTCTATTG
TAAATCACTCGAAACAATCTCACAAttcatcgcttttttagaaaaatcag
ggatatgttatagcgtagctggataacgcacatttgaaaaagccttgttc
tatctctgtccctgacattaaaatttgataagaaattaaacttttttaat
tacaaattcgtgaaatttggatttctttttagccaatgattctgctgctg
cattgttcacgattaaaaactttgagttatcaagagggtctgtaaaacat
cggtgaatgacaatttaaaaaatgaaaaacattgttttcattagtaaagt
tataagaaatttcttctgtaagattataaatagctctttttcatttgaaa
taccgcgctacaccgtgGGGCGCCTtgctttctaactgatattttcagat
agcaagtcggtatgtctgattatggaaaaaatttcaagtcaattgaaaca
atatttgtcaaaatatttacaatccgaaatttttaaagagaaatcatgaa
agcttctcaaattcataacacacgctgataaaaatagatttcatttacaa
aagcgggaacatcatagcaaaatatatgcaaacgtactgtatgaatactt
tgtctgcttcatttttcttataaaaacagaacactctaggggacagagat
ggatttctattatgaacagtttacaatagaaaagacaaaggagcaatccg
ctaaggaattctcgtccttcatccagctacgctataacatatccctggaa
aaatcaaaaactccgataaggtctattctagcaaaaattcattttcttgt
TTGCAAGTTTTAACATTGACGACTtgtcttttgattttcttgtatTTGTA
ATACCCTATTTGAATGGAATGTATTCTTTCTATTTAGATGAAATGAGCGT
GGCTGATTGGTTAACGAAAACAACCAATGGTATTGTTTTGATTGCNTTTC
TATTTAGATGAAATGAGCGTGGCTGATTGGTTAACGAAAACTACCAATGG
TATTGTTTTGATTGCAGTTGTATCTTCTGTTTTCCTTATCATAATTATTG
TCGCATTCATTGTTCGACGAAGGTAAGGAAATTTCCGAGCATACATTTTG
ATACAAGCcaattattttcattaaatCCGGTATGATCGGGGCGGCTGCTA
TATTCACTCTGGTGTCAAGTTTTCTTGGTGGTACGTCAGAAAGTGAATGA
TAGAGTTCTATAAGTGTAACATACAATTGGAcaaatctgataaaaaaatt
tgccgTAATTCGgcgtaggctgctggcatccactaacggattctaTACGA
CCttgggttttgtagaggtctgcgattcagactaaattCGGCGTTATTCG
CGGAACTCCTCTCAAAGTCTCAAAATCCTATTTTCTTTTGAACTGTACCA
ATCAAATATAGTTGCGTTACACGAGAAATGCTACGTACTACGTAGCTTAC
GTATACTAATAAAGAAGACTTGTTTTCCTTGACTTTGTAGACGGAGACGT
CAGAATATTCTGTTGGATTATAAATCGTTTGATAACGAGGATGGATATAT
TACAGACCCGGCTGAAACACCTGCTGCTGGTTCTGTACGAATGCAAAATC
CTCGACAATCAAAGTAAGCACATATAGTGATGAATTATCGTTAGacattt
aaatcttttttttgtcTAAATTTATTCCCTATTTAGAAAAGGCCGTAACA
CACCCCCTGTCTCGTCTGTGGAAAAAGCACCAACACCCTTTCATGCAATC
CTACCACGAACACTTTTTTGTGATTCTGATGCGGTTCATGTCCTCCATgt
ctatacaccttttcgagcGTAGTCGCATGGTCAGGCGCATGCCacttatt
tatttaattatccccctaaaagtcgatccaatccttttttgacacatttc
tataggtgcaaaaaaaggactgggacggttttagtgggataaagcgaaca
aaaaatgcccacgcggcaattggcggctagtATAATTaaaaagtggtgca
agtggCACTGATACGACGTTGTCCCACTACTTTGCTTAATTATAACAGAA
ATACTTTtgttgaagtttgtttttaataaCGCTTCTTCTCACCAATTATC
ACCTCTATATCCAATTATAACTTGAATTCCACAATTGCTATACCATCTCA
CTTTCAGGTCTTACGATAACCCAGTATTCAGTCAATTTGGGTCACTCAGT
TCGAACACGTTTGATCAATATCCTGATAAAAGTACCGGTGATAGATGATA
ATGACCTTTTCACCATTTCCAACTGGATTTCAGATATCGCATCAATATTA
GATAGATTCCGaaatttttaatcttaaaaTTGTTATGAGAGCCAGGAAAT
TTATAACGATCCTATGCTGTTCTCAGCTCTAGATAGACGGTTATGGTAAT
CAACACGCCTGTATTTTTTTGTCGATAAAATTTCATTATGATTAGAGTTT
ATGTCTCAATCAAGTTAAAAGTTAATTCTATGTCgatttatttgaaactt
tctttAGAAAGATGTGTATTGAAGCTTTCAAACTACATAAAAGGCCTGGA
TGGTAGTTTATGAGGGTTCTTTATATacatttcgttcttttttttgacac
acTCGATAAGGACAATAACGGAGGCTTAAATCATAATTCCTTTGGCGTTT
GTGGATAGCTGGTTACATTACATCAATGCCGTTGATGAAGAGCGTCATGA
TAAAGGGATGTTTTCAGAAATATTTCCAATACATTATCAATAGTTATGCA
TTAATTTAATATGGATAATTTTGTTAAATAGGATTACca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018264TCONS_00018264Clytia hemisphaericatranscript
TCONS_00018265TCONS_00018265Clytia hemisphaericatranscript
TCONS_00018266TCONS_00018266Clytia hemisphaericatranscript
TCONS_00018267TCONS_00018267Clytia hemisphaericatranscript
TCONS_00018268TCONS_00018268Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018264-proteinTCONS_00018264-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:244373..250111 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.17	0.06	0.07	0.28	0.01	2.07	2.25	3.65	4.65	5	5.96	13.22	11.22	18.71	18.29	11.84	15.42	11.4	9.44	20.44	20.78	10.43	11.45	6.64	6.27	1.48	2.75	33.08	28.02