XLOC_010371 (gene) - C. hemisphaerica

Overview
NameXLOC_010371
Unique NameXLOC_010371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000301:128918..138919+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010371 ID=XLOC_010371|Name=XLOC_010371|organism=Clytia hemisphaerica|type=gene|length=10002bp|location=Sequence derived from alignment at sc0000301:128918..138919+ (Clytia hemisphaerica)
agttgATAAACTATCGTGGCATTGGAGACAAGAGTACGTTGCCTACTTGA
ATTTCCACTACTGGCATCGTAATGGAAATATCACTTTCCAAAGTTGGGAA
CAGAGATCGAATCATGAAATTGTAGTAGACGGTGTAGCACAGACGTAAGA
ATTACGTATAGATTTCAAGGAGCCCCGTTCACgagattttaaatcaaaag
attTAATGCGGTTTTCTTGATTGAAATGATGAAAGCCACTCTGAATCTGG
ATATATCAGTTCGTGCAAAACTTTCTTTTCTAGTCTGACAAGCGTACATA
ATCCGTGCATCGAAAGTATAATTCAATCGAGtagaaaatttttctaattt
cttttttcttttttcaatatgtgaaacaaaattgaaaaataagtctaatt
tctattttctatttgaaataggaaattaaactaaaatgatatattttggg
aaaatttagGACGAGTTAGGGCGCTCGGTGTGTTCTTCGTCTTTATTTGG
GAATCCTCCTCCTCTGCAAGGTGCCACCACCTTGGCCCAATCCTAATACC
GGCAGGTCATTGCATCGTCTGTATTTCTTATCTGTGTATCGAAAgtatac
agcacctgaccccgagaatgaaGGTCCTGACCTGGaagacctgaaagatg
tagatttgaatttttaaaaacaatgaatgttttcaatgaaattttgaacc
tccaaaatcctttcccaggggttagtttcattacttttgataNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtataacccccagaatgtaggtttggtt
ttatggctttaaatctagtaatagtaaaatgttgatattttttcaaatgg
attaattataacagcaaattttacaaatattttgtgccaaaacaatattc
taaagagcattttgttattctgaaaaatggatattttcgctttttaaccc
ccagaatgtaggtgaaaagatttggttgttgagagcagaatttcagtatt
catccgAAATTATTAATTTCTAagagaaattcatactttagaaataatac
ttaaaatttaacaaagatattaattttatgtgctacaaatgaggaaaagt
aaaagaaagtaagaaaagaagagacaagaacgttgtttttattttgtagg
ttgaaaattttttgttaaaatatgtgaataatgtaactaTACTTCTGCCT
CATAGCCCCGTTGGAACTTTTCCCACAATGGGGACAAAGATTTCTACTAA
AGTCCCAAtgtggatagaaattctattgttccaaacttaaGCAAGTTTTC
TTATTGGGGttgggtcccagcgggtctgggatACGtcgaaaaagctcaaa
atgtgAACAtcaatcatctctcaggtagtactttcatgttatgaaagtac
aacaatgaaagtacaacaaataAGTTTTACATAATTTGACAAACATTTTT
GTGTCAGATTATGAAGGCCCAAAATTgaaggtcaactaaccccaaaaagt
aggtcaaacattttcgtcaaaatatctgacttagaacaataaattttgaa
atggactatttttcccattttctttgTTCATTAGgagtaagaaaataccc
tatcatcataacttaattccaatagatttcgatttagagaggatttattt
aaaaaaatgcctCAATTCGGGTTGTATCCGATCAACTTTTGATTCAGATT
TCCGTTGGAAAAAACTAATTCaagtttaaattttatttctatAAATGATA
AGTAATATGTATCAGCAGGCTCTGatacaactttttatgaagttgaacta
tcgttagggctacaatgctaaaaaagaaaaacctacattctcggggttta
ctgcattctcggggtcaggtgctgtacacgcttttttttttataagaata
cactttataagaatgtccatgatgaaaatggccaaaaattaagaatatgg
taagaatatcaccatcatggaatttagcaaccgaacctaagaatgccatt
tttaatgtattttaacctgtagattgccaaattcgatcttaacctaagaa
taccgtaagaatattttttgatgattttcgccaaaaagttaagaatattc
atgatgaaatgaaaaaacaccattcttataaaaaaaaagcgtgtaattca
tttttttaatgGAATTAGAAATTCGGAAtaaattctgttttttctttttt
cattttgaagagtaatattgaaaaattgaaccaattttctattttctatc
aTAGATATCATAGAATCACCATTTTTTGGGCGTACCGGGGCGTTTTTTCT
CCTCAGGGGTCTCCTCCCTTGTTCACTGTTGTTACATATGTTCCTTTTTC
ATTTGGACCCAGATTCCCCAGGGGCTTGCGATGGCATTAGTGGCAAAAAA
GTGACGCGTTTCTTTCTAGATTTTATTGCAGTTTCTtggtttttaatatt
tttcaattttctattcaatttcaaaaagaaaattgaattataCTTTCGAT
GCACGGATTGTAcatgttgtgttttttttcattgtcaTTTCTCAGAATTT
TGTAAGCTCCTCGCAGATTTTAGGCCTTTATAGTCTATAGAAAATGtaat
ttaaaaaagtgtttgttaaaaaaagtctgacataaaaaatgaaatttcta
cTCCCTTAAATGTGAGAAGTGGTGTATCGTGCAAGGAATGAATTACTAtg
aaccaacgatgtaaaaataatagataaccaacttcctctagaaggcactt
ctccaaagagaacaaccattgttttcctattgaaatgagcactctattaa
aaagctctgtgtgcagtgcgtgttatgcttttagctagattttgacacac
tttttgacatccactgaattgatagaaaattggattgttatttactgcaa
attttggaattttccaACCtttaccaatctttagacaaattgactacgga
tcggcctgataccacttaatcttcatctggataaataaacgctcataaaa
tgctgttatctgaaaattgtatgtgtgatttgaaatgtgatatctcacgt
atgaaaagtgcatgaaggttgcatgatacaaaataaacagatgaatgttt
atagaacaataatatctaattaaaaatttttttctgtgaggctgcctata
ggaaaatacactttttctaacccaaattttggaaaaatatacatcacgtg
attgATTCTGTCCAAttgaaggttgcaaatgaagcaagtttttatttaat
tccactttttacgatgcaaaatgtcattatttttacaaccgtaacacgga
tgttttttgagaatcaaggcaagttggtgttctattatttttacatcgtt
gtaTGGATGAACAGTAGTTAAATACTACAACAAGGATAAGGTTATgaata
acattttctttgatgGTTTCAGGAATACTCAATTTACTGTGGCATTTGCT
GGATACAGAAAGTTTGAATGTTTCGTTGCAAGTGAAGGGAAATACAAAGA
GGATAAATTTCGATTGAAATATCTCGATGGAAATGGAGATTCACAAATCC
ttgaaaaacataaaatggCTTATTTTACAGGACGTGAGTTCTctttatga
taaaaaaagaaGTTTGCCGCTAGAGTCCTGCGAGTTTGCAGTTAAACCAA
ATTCTTTCGaattttgaataataaaaatataaaagctcGAAGAACAACTC
CTGAAGTTATCTTAATCACTTTAAGTTGCAGGAAATTTGTTTTCTCtata
taatttctttttcaaataaatttatttccAACAGGGGAAAACCTTAACAC
GCCCGAAGGAAGTGCAATCAATGAAACAGCTGTTCAATTTGTTATCCGGG
TTCCTCATCTGACAGGTGTCTCTGATTTCGGAAGCATCCAATCATACAAG
TTGGTAGTATGGGGTCCAGGCCTCCCTTCAACCACTGTTGAGATTGCAAG
CAATGGTGAAAAGACTCAAGTGTTTTCTGGGTTGAATATTTGGTCCATTT
ATTGGGCGTACACGATCTTCGAAGGGAGTGGTTTTATAACTAGAAGTAAG
AAAGTGGAACAACGAACTGATGAATCTTGTAAGATAATCTTTTCTCACCT
TTATTCTTTATTGATGATGACAGTTAGGTCTTTGAATACCTTCTTGATTT
TAAGGCTTGATCACTTGATTATTTTAAGCAACTATCAAATATCTTTTGTT
GATGTGTTTGGAAATATTGCATTGGACAGTTTGCGGAAATGTATGGttaa
tatctattttttatgGTAAGAAGTCAGAATATAttaacatttcaaacaaa
aattctgTAATTTTAAGCTTGATTTTTGAACATATCTCTTCAGATCCTTT
CGATCCACCCAGCTATTTGAATACAGCAGCTCTCACGTCAACTTCCATCA
GAGTGAACGTTGGTCCTATCCttcagaatcaaaatggttATATCGTCAGC
TATTCTTTGTATTACGCCAAAGTCGACACTGACGGCAGCACCGTCATTGG
GGATTGGACCTTGAAAACTTCTGCCACGCCCCAAATTGATGTTGTGGGAT
TGGAATTCTGGACGCATTATGCTTTCAAAGCTGGAGGAGCGACTGCTATT
GGCGCAGGACCAAACACTACCACACTTCAAATTGAACGAACGCTTGAAGA
TCGTAAGATGAAATTAATCTTGATAGTTTTATTTCGAATGATTGTTTTTG
TAAGATACTtctgcagtgccgtagcaacttggggggcaagggggggctat
gccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccaaaccatggttg
gccctcgcggtgtcactaaacttcagccccccaatatgaaaatgcttcct
acggcactgttcTGTATTCATGTTGTTGAATGACCAAAGTTAATTGAATT
ATTCTACAACAAAATTCTGTGTTTAAATGCAATCCCGCCCATGAACACAA
AGTGACTTTCGCTTCCTcatttttaaagtctattcGCTTTAAGTGAGCCA
TTTTTCAACGAATGCTTCGATTTTAACATATTAAATACACTGTTAACAAG
ATAAGTCAGAGCACTGTAAAttctaagaaaaataattacaaaacatTTCG
AAAATGGAAATGAATCATGATTTCGCATAAACTTCTTGCATCGAAAATCT
CTAGAAGAAGTTTCATCGTCTCAAAGAACAAAAAGCTCATTTttgttctt
cattttcgaaaagtTTCGAAACTGTTTATCTCAAAAAGTATAGGTAGTGC
TCTGATTTATCTTTTAAATGGTATACGAAGCATTGGTTAAAAAAAAGAGT
TGTGCAAACTTGAAGCAAAAGGACTAATACTTCATGCTTGCTATAAacta
cttttttaatttttaacatatGAACTGCTTCCATTGCATGCATTTGCTCG
GACTAACGTTTTCTCCTTTATTTTGTCTGTAGTACCGACAGGAGGACCTT
TGAACATTATTGGGAAAAATTTGACAGAAACTTCCATTGAGATCATTTGG
GATGAAATCGCTGAAGCAGATAGAAATGGTATCATCCTCGGATATAAAAT
TCACTACAAAAATCTTCGGACTAATGCCGTAAATGAAATTGAAGTTGGAA
CTCATCGCGTGGCAAATATTTCAGGTAATCAATTGTATCATTCTTCTGTG
CGTTTTTGTAGCTATAGAAGACCGTCATCTCGTTTGgctaatattttttt
taaatcacctGAAATTACAATTTCCAACTAACGTTAACGATATCGGAAAA
ATATCATATCAAATCACTCTTCTCGTGATCTTAGTTGAACAATccaataa
aaaaattgacactgATTCGACTGTGATTTTCCAGGCTTGGATTGGTTTCA
AGAGTATGAGGTGAAAATGAGTGGCAAAACAAGCGTTGGTTATGGAGTGT
GGAGCAATCCTCTCATCACCATCTCCACTGACGAATGGAGTAAGTTACAT
CAGTTAGATAAATGAACGAATCCGAAATGCACGTGTGTATATACCGACAA
TCATTCTGCATTCCTCTTCTCTATTCAAATGTCTGTTGGACGAAATCGAC
ATTCTTAACCTTTTCAATCACGATTTGTGTGTCAATCAAAATTATTGGAT
TTTCTTGATTCATTCTTCTATATTTGAAATGGAGTAACATGTCATTTTAC
TacatttcaatttcaacttATTTTTCAGTTCCGCAATTACCACCGTTGAA
TGTTCGAAGTGGTAATATCACTGGAACAACCATTCAATTACTTTTCGACA
ACATTGCTGATCCTTTTTCTAACTTCGGATATCCTATCGCTTCCAAAATC
AACGTCACTGCAGTTTCAAAcatatttcaacaacaagaaatCCAATATGG
TGGACCGAACAGCGCAATTATAACAGGACTTAACGAATATACTAATTACA
GTTTGAGTGTAGCTGTCGGAACACGACGTGGCTTTTTAGTTTTTGCACAG
TCTATTTTGGTCAGAACAGACTTTGGACGTgagtagtttttgttttgata
cgTTGCTTCCtgtgttttttctttattttttttggagcATGTCGTAattg
ttatttcttttttatttctccAGCACCCTCATTGCCACCTGATAACATCT
TTGCACAAAAAATCAACTCCACCGCTTTGAGGTTTCGTTTTGAATTGATT
CCACCTGATGATCGAAATGGTCTCATCACAAAATATCTGGTCAACATTCG
CCAACTCAATGTTGACACCAGTTGGACCACGTATGAAGTCTTGGAAAATG
GTGCGGTGAAAAGTTTGGATATTGGAGGGCTTGAGAAATGGCGTGATTAT
GAATATACAGTTGCAGGATGTACAATCGTTTGTGGTGTTGAAAGTGCCAT
TGCAATTATCAGGACTGATCAAGATTGTAAGTGCTTCCAGTGAGATTGTA
TTTCGCAATTTTATTGCTATTATTCTCAACGACACCCCTCGATTCATTTG
AGCTGATAGTAATAACAATGAACAATGCCAAggcgaaaacaaaaaaatgt
agtgtttccggaatgtgggtgaaggaaaaaagctctcgtGCGGCtggccg
gaaaaaaattatttttgccattttttataacttaagatcattgaaataga
aactttgaacataacttttatgtacaaacagtatgaagtaagccctgaat
actaatgcaTCAACTattaacgaacaaaacttgatttacaagcgggaata
tctagCCAAACGatgtttgatagcttgaacggtcaacttgattttcttta
tgatgaaccgtatagatgaacccatagtctgcggccgggtcagaaaattt
gtttttttcaccCGGTCGGGTGGAAACactgcatttttttattttcgact
aatgatgaactttttttttgttccaaaaaaCACAACTGAAAATCTTCATC
TTTGCTAGACTAGCTTTAGATAGAATTTGGAGTTTTGAATGATTAACaat
gaatgtttttgttttccagTGCCTGAGATGCCACCTGCAAACAGAACTGC
TGGTCCAGAAACATCAACTTCCATCAAAGTTCAATGGGATGTTGTTCCTG
AAGGCTTCAGGAGAGGTGGGTTTGATTTGCTCCTCTTTCTTTGTCCTTCT
TAATAATCTAATTCATTAACTCTACTGACAACTCACAACCTCTCGACTTG
ATTTTTTGTAGGTATTATAACGGCATACCACGTGATGTACAAAGATGATA
CGATTGAACCACCTGATTGGAAAGAAACTAGTATCACAGCACCTACACAA
GAAGTCGTTTTGTCAACTCTAAAGTTCTTCACAAGTTATTCATTCAAAAT
TGCAGCTGAAACGGTGAAAGGACGTGGAAACCATTCCATTGAATTCTCGA
CCAAAACGTTAGAAGATGGTATGACTTTTAGATTTCTTGTGAATATTGTA
ATCTGAAAAATGTTACATCATATCGGTTAAAAACTCATGTTTGTAATACA
AAAAACTGATACATTGAcatctttatattttttgtagTTCCGGAGGTTTT
CCCTTCCAACTTGACATGCATCAATGGAAGCTCTTCAACTATCGATTGCG
GATGGGATCAAATGTTGCAAGTCCACGGTCAAGTTAATGGCATTGTAAGG
ACTCTCATTTTAACAATCAAAACATTGTCTAAACATTAACCGCCTAGTTT
GAGTACATCACACTCTtggtcttttttgttttttcagatTGCGGGATATC
GGATATATTACAATGTGTTGGATTGCTCTAAAGCAGAATTAGCAGATTGC
AATGAGAACACAACGTTTGTTGATGAAGTGACCGTACCTGATCTCCTCCA
CACGATCAGCAATTTGAAGAATTATACTGAATATGAGATTCAAATTGAAC
TGTTCAATTCTCTGGCAACGGGACCAAAATCACCCAAAATCATAATTTCT
AC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018496TCONS_00018496Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018496-proteinTCONS_00018496-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:128918..138919 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.42	7.18	3.28	2.8	0.69	0.33	0.88	0.52	0.42	0.56	0.57	0.43	13.74	16.1	5.51	4.09	0.11	0.35	23.27	21.48	0.24	0.36	5.01	5.25	7.74	3.41	0.46	0.62	3.27	4.69