XLOC_010450 (gene) - C. hemisphaerica

Overview
NameXLOC_010450
Unique NameXLOC_010450
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000304:190773..200715-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010450 ID=XLOC_010450|Name=XLOC_010450|organism=Clytia hemisphaerica|type=gene|length=9943bp|location=Sequence derived from alignment at sc0000304:190773..200715- (Clytia hemisphaerica)
GTTTGGACAATCAAAAAGATCTTTGCATCCTACACAGTGTCCGCGACGTG
CGAGAGTGATATGGTTGTTAAATTTTGATTCAAATCTTCAAGCAATTAAA
ATAAATTTTCTAAATTTTCATAAAGAATTATGTACAAGAATAAAAATCAT
AATTTCAACTCCCTCCCCTATAAGATCTTCTAAATCGTGCTCTCGTTAAG
CAAGAAGTCTGTAATAATAAATTGTTAGCTTTTCGATGGTATGATTTTGA
GCTACTAATGCTCTGAAAGTCAATGTGTAAACTATGTGGTACCATCTCTT
CCAAAGGTCAGCTTCGAGAAGCTCTTTCTCGACTGGAAACAAAAAGTTTC
AATCCAATTTCCCAGTGATTATTAGTAAACCATTATCTTCAATAACAGGA
ATACGTTACACGNTTTCATAAAGAATTATGTACAAGAATAAAAATCATAA
TTTCAACCCCCTCCCCTATAAGATCTTCTAAATCGTGCTCTCGTTAAGCA
AGAAGTCTGTAATAATAAATTGTTAGCTTTTCGATGGTATGATTTTGAGC
TACTAATGCTCTGAAAGTCAATGTGTAAACTATGTGGTACCATCTCTTCC
AAAGGTCAGCTTCGAGAAGCTCTTTCTCGACTGGAAACAAAAAGTTTCAA
TCCAATTTCCCAGTGATTATCAGTAAACCATTATCTTCAATAACAGGAAT
ACGTTACACGTGTAAAAAGAAATTAATCTCAATGACGGTACAATTTTATA
CCCATCGGAGCATGAGCAGTCACTGTTCACTTTGCCTGACCCTTCCCCAT
GCCTCTCACTCTGACATGGGTACCAGCAAAACTCTTCTGGGTACCCACAT
CCAGAAGTCATCGGTTTTTGTACTAATTCAGTACTCTTTTTACAAGTAGC
CCATTGGTACGACTCATAACGGGTCAATTTAACACAGCTTCTTTTTTCAG
CGTCTATAGCGGCTTTACAGTATTTCTTACTAGCTTCTGTACACGTGCAT
GCTTCTACGATTTCTCTCTGAAACTCATTGTTGGTCAATCTCATTTGACA
TTCGGGATACCAACAGTATCCTGTCTTTGAATTACAAATATATTGCCTCG
CTGATTCAGTCTCGATTTCTGCTCTGGCCATACATTTGACTTCTTGATAA
TCGAGATAATAAGGTAATATTTGACATTCCAATAAGTTTTTTTGTGATTT
GTAACAACTAGAAGCTTCCTCTGTGTTGACCAACTGGTGAAAAAATACCG
TGTATATTAAAGACCTGTAAACAAGCCTCATTTTTATTTTTCCTTACTCT
CTGAAAAGAAGAAGATTTAAGAAGCAAAAGACCAAGAAAGCTAAAATGCT
CTCCACCTAAATCTGCTAAAAATGTTGGAGCCTAATTGTTACTTCAAGTC
TATTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTTTCT
TCAATCTTTATAAATTTGGTATCATTGGAAAGATATTAGTGAGTGGAACA
ATTTGAAATAAAAAACTCTTTAAAAAATTCTAAAAGTGAAGATGAAAATG
AAGAAGAAAAAGAGGGAGATCTTGTAGAAAAGTGCTATAACTTTCATTTT
CACTGGAGAGATTCTTTGATCTTAGGAGATCATCATTGTGAAGAAATTTC
ATTAAAATATTTATTAAATATAAAGTTATGATACAAAGTTAATAAGTGAT
TGTCCCTAAAAAACAGCAAAAAATTGCAGAAAACAGCATTTTTAGACGTC
AATCAGCTTATAACTTTGTTTGATATCTATTGACTGAATGATTATATTTG
AGAATTTTTTTCACAGTGATGACTTTCGATGATCAAGGATTCCCCTCAGG
GAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCGTTTTTTTCTTCT
TCATTTTCATTTTCATTTTTAGAATTTTTTTAAAGATTTTTTTATTTCAA
ATTGTTCCACTCGCTAATATCTTTCCAATGATACCAAATTTATAAAGATT
GAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAATAAGAGTGTACACTTA
TCGTGAATAGACTTTATATTTGGATTTAAAGTCACAAAGAGCGAAAAGTA
GACGGTTTTTCCATTCCTGGTTTTTCCATTCCACTTGTTTTAATCTTGCT
GCGGTGGCAACAATTAGTTTCAAGTATTCCAAAGAATCTTGATGTATAAG
TTATCGACAAAATTTTCCAGCGTTTTTAGTTCCATAATTAAAGCATTTAC
TTATGCTTACTTTCCAATCTGTATTCTTGAAATCCTTGAAGTTTTGAGAA
GAATAAGAACAATCTTTTTCAAATTTTAGGGCGCAGCGTGATACAAGGAG
GAACGGAGAAGAAACATGAAAGTTTATGTAAACAACGAAGATCCCGAATT
AAAATGAAGTGAAATGTCGAGATTGTCTTCCATCACGTCACAATGAAGAA
CTCTTTAAAAAATGTTATCGAAAGTAACCCGTGCCGGAAGAACTATGATA
AAGACGGCCATTTTTGCTTTGATTACCAGGTATGCTAATTGTCTTTCTTC
AGCCCTGTAACATTTCTTTATTAGTTTCTTCCGCCGGCATCTAAATTTTT
GTTGACTCCAGACTTATATTTGTCTTCTCTATTGTATCAACTCCTCATCC
GCATCCGAGATATTTTGTAAAACGTCTGATAAAATTTCCGTTTGCATTCG
AAAATTTATGCTACTATTTGCAAAAAGATTTGTGAAATATGAAATCGATT
GATCTCGAAAACTCCATGAGAAGGAGTTTGGTTCTTCAGAAACACTATCA
AATATGGCATGGAGGCTCTCCGTCGTAGATGATTAAACAGTAAATTTTGG
TGTGCAAATTCATTGACTTAGTAAAACAAACAAGAAGATCTCATACCACT
AGATTATTAGTCATGTCAAGTAACACGATATCGTATTTCAACATACGGTG
TAAGATTTTGAAACTGTGTTTGTTGCAATTCCGTGAAAGGAAACATTTTA
CACCAGTATATGTTTTGATAGATTTATACAGTTTATAGAATACACTATCT
ATACACTCCCTTCTCACAGACCCGGTAGGATCGTTCCAGCCAGTGGGGGT
AAGAATAGGACTAAAACTTGATTGGGGATTTAAATTCCACTGATTTCAAA
CAGTCAGACAAATTAGTAGGGATGGGGAAAATAGCATAATATTTTGCAGT
GAGGATTAGTTGATTTGATTATTTTACAGTGGGGACAAAAATTAGACTAT
AATTTTCCAGTGGGAAGGGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTAT
CTATCATCAAGGTGTCTGACTAGATTCTTCAGCCCACAAACCAAAACTTG
CTAGTGCACTCGGTATATTTTGGCATCTTAGCTCCCTCATTCCCTGGTGT
TACACTTTGTAACGGAGATCTAACCAACGTTATCTTTCGACACCGTCAGC
ATCATAACGGACTACCGACATCACAATAATAATTTTCCATCCCAAAGTGA
CTCCTCCACGCCTTTACCTGTTTCTTCCAAAGCCATCAACAAAGTCGATA
TGTTTTTTTTTGATGTGCGTTTATAGAATGCATTTGCTGCTCAAAAATAT
CAATGCTATGTCCTCTGGTTTGAAGAAAGGTTATCAAATCCAGATATATG
TTCAATCAATTTCTATTTCACGTATTTTCAATTCAAGCTAAATTTTGACA
CTTTGAAAACTGAATCAATCGACGTAACACCTTAAGATAAAGATCTGTTC
TCATTTAATAATGTAACTCGAGGCGCAAGTTCACTTTCTTATCAGAAATT
AATCATTAAAACATGATCTAAATGATGGTTTTCTTACAATCCCCAATGAT
TGCACCTGTGCAGTTGGTTTGGACAATTTCCCCTCAACCAGCCAAATATT
AAACCAAGTTATTTCTGTTTAGGACAATTGTCTTCGAGGACTAAATTTTT
TCTTTGGAAAAGGATTTCAAGATTCACAAGGTCCTTGCATGGAGTGTATT
TAACAAATTACATAGAATATGGTCATCCGATCTTCTCGAGCAAAAGCTCA
AAGTTAAAGTTTTCAAATCTGTTATTGAACCTATTCTTCTCTATAGTTCG
GAAACATATGGTCTCTAACTCGAAAATTGGGAAAACAACTAGACGGAACA
GATACAAGACTTTTAAGAAGAGTTAAAAATCTCTCTTGGCATGATAACCC
CAACAAAAACACCATATATGGTTCGCTTAAGCCTATTCTACCATCTTAAA
AGCTAAGCGAGTCCAATCCACTGGTCATTGCCTTCGCGTGACCTCAGAGG
TTGTCTCGTCTCTAATTCATTGGAAGCCCAAACTTGTTCCGCAGAGGTTG
AGGAAATTTACTTTCACTGACGCAGTGAGCAGGGTCACTGGACTTAATTA
CCGTGACCTGGATACTGCTATGCGGGACCACGACTCCTGGTGCCAGAGGG
TAGAATCCACCGTGGTCGAAAGATGATGATGATGTCCTTGAGGGTAATTG
TTCGGGGGTAAACTTTCCGGGGATGTTTATAACACTTCGAGGCGAAGATG
CAAAGACAGCGGAAATTTCATAAGAATATTTTTGGATCATCACATTCTTC
GAATTCGAGTAAATAAGTCAGCTAGTAGAATGGCTCCAGGGATGGATTGC
CTGGTGTGAGGTGACCATGAAAAGACAAAAGCCAAGTTTTTCATTAACTT
GATACTGTAGATCCGCTTCGATCCGCTCAACTTTAAAAAATACCCCCTGA
CTTTACAACGCCTTTCCCGGGTGTTTATTGGTTCATTGACTTTGTTTTCC
TCTGTTACCTTTTTCCAAGCTAAAAGATCTCAAATTGGTTTTACCAAGAG
TCTCCCTTATTAGCCTAAACAAGCACAGTAAATTATTAATGAAATCATCT
TTTTCTCACAAATTTTAACATGCTGACTGATTAAAAGATGAAGCAATGTT
CTAGATAATAGGACGCTTAAGGGCATTAAAAGTTTTTTTATAAGAACACC
CAATAGACCATTTTGTCCATTTCCCCAAGAAATCGCGTGTTTCAGAGTCC
GTAAAGCCTCAAAATGTTCTTAAATTTTGGTCATCGAAGCAATTGAAGCC
ATGTTCTTATAATTGTAGATATCAGCATGCGTTCGAATGATCAAAGATGA
AGAAAAGTTCTAGGTAACAGGACGTTTAAGCGCAATTTCTTTATCCCTTT
AGAAGCAAGGCTGAACTGGTTTTAGAAGCTTATTTAGGAGATCATGGAAT
TTAAATAATTTGCAATTTAGCAATCTTGAAAGCATGCATTAAAGGGACCT
ATTATGGTATTATCAACAATCAAAGAAGTAGGAAATTTAGTTTTAAAGAA
ATTAAGTAGGAAGTTTTTTGGCATTAAATCTTTGAAAAAAATTGACCAAT
TATCAAAATAGGAACATGCAGTGATTTCATAAGTATTGTTGAAAAGTGGG
AAGTGGGAAACGTACCAAAATAGGTATAAAGAGGCCTGAAAGATCAGTAA
GTGTTCAAAGCACATCATTAGAAGTTCGAAGATTGTACTTAAAAAAGAAG
ATTGGTAACTACTTTAACTGTACGAGGATATATTGGAAGTTTCGTACACT
TTGAAGGACCTTTTGAAGATATGGCAATCATTTCATTGGCGCTTGTAGTG
TTTCTCACATATGCTTCGGCATCTGATTCGGAAGGTGAGAAAACCATTCC
ACCTCCAGGCTAAGCTTTTTGCTTTAGAACTACTCTATTTCTAAATGAAA
GAAGCAAGGAAAGACACTGTATAAGTAAGCAAGTGTGTGACCGCAGTTGG
AGGTGACCCGAAGGCTCCTCTTTCGATAGCTATCTACCCGAAGGTAGGGG
AGGGCGCCACTCCTTTCCCTGGATTTCTCCACTTACCCTTGATCCTTCTC
TTTAATTCCTGAGCATCAAGCAGAGAGGCATCGAGTACCATTTTGGGAAT
CTTTGGTAGGACCTGGCTGGGGGTTGAACGCACAACCTTGCGCACCGTAG
CCGGATGCTCTACCACTACACTACGGTCGCTAAAATGATTCAAAAACATC
TATGTTTGAAGTATTCAATATTGAAATTAAAGAATATTTAAACCAAAAAA
TATTACTGGAACCTTCCAATAATCAATAGGGCTCAAATTTTGAGAAATTT
AAGAAGAGTTATAAGGTTTTAAAAATGGAATCCAATCAAAACTCCATGGA
CCTTTTCTTTTCAGGCATTGAACTTGTGCGAATGGTGAATTGTACAGATG
AATTCGCCTATCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCGAA
GATTTTTGTCAAAAATACGGAGGTCATTTGACGAGTATAAAGGATGCACG
TGAAAATGATTTTATCGATGCTTATGTTGTTGGCAGGTATGTACAAGTTT
CTTAATCAACATTGAACCTGAGCTTAACAACTACTGACCAAGGATTTATT
ATACACTGGATATACAAGTACCTGATTTTTGCTGATTTCTCGTGTACTAG
CTATGTCCGCAGTAATGATATTATTGTTCANACACTAGATATACAAGTAA
CAGATTTTTGCCGATTTCTCATGTTCTAAGCCATGTCCACAGTAATGATG
TTATTGTTCACCCTCCTTCCCTCATTAAATGATTTTTCGAAGCATTTTTA
TTGCATTTCTTATCGAAAATCACTCATCCAATTCCCAAAAGAGACTTAAA
ATTTTCCAGTGAGAGTCAAATTCTTCAAGTTAATTGCTAATTATAAGTCG
TTATGATGTTTCAAGTTGTGAGAAAGATGCAAAAGATGTCTTATGTGTAA
GAAATTGAATGCTGACACCGGAAATTTTCAAACTTCAACCACAAAAAAAC
CACCTTGCCACCGCGTGCCTCCAAAAGATTTTCATACCACAGTGACACCA
AGACACTCAAGTCTAATGTTTGTTACTTTTATATCTCGTGGTAACAGTTT
TGGAAAGATATTCCCAATTGAAAATTTCGTGTTACTATAAGCATTTTGTT
AGATTTTTCTTGTCTAATGATGTTTTTCTCACATTAGATCTCACAAATGT
ATCCGGCTTGGTATTCTAGCCTTACTTTCAAAATTTTTTCCCTGCAAAGG
TACGAAAAGAAAACGCTAGGGAACTTTTTTAAAATGAGATTAATAAGCAT
TTTTAAAAATCAGATACTTTCGAGCCGCCGTGACAGTTGTCCTTTGTGGA
CAAAGCTAGAACAACAATTGTTTTCTGAAACAAAGGAAATACAATGGTCG
CTCTCCACCGTTTTATGAGTCATTTATCCAAGAGTGAACAATAATATCAT
TACTGCGGACATAGCTAGTACACGAGAAATCGGCAAAAATCTGCTACTTG
TATATCCAGTGTATAATAAATCCTTGGTTATTCTAATCACGCTAACATGG
TTTCCACATTTTAGTAAAAAGAGTGCACACTTAAAGCGAAAGTTCTTGGC
CTAACAAAAGTTTTGATTTATTTCGCAGGAATTTGCAGAATCCATACATC
GGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGGAAATGGCTAGA
CAATACAACCTGGACCTGGCAGCCATCTATTTGGTATGGGTGGGAGGATG
GTAGTAAAACAACTGCTGATATCTATGGGTATTATTTTGGAACCAAAGAC
AAAAAATGGAAATGGACAGCTCAACCACTGGATAAAAGTCCTTTCATCTG
CAAAGGTAAAACTCCATTGTTACAAGGTCCCATTCTCTCCGATCTGCAAT
TTCTCAAGCATTAATTCACATGACTAATTTCAAGCTACCAGACGCACTTT
TTGAGTTTCGGTATATTTCATATCCTTTGTGTCGTACTTGCAGTATTTCC
ACTGGGAATTAAGATTTCTGCAAAATTCGAGTGGCGCCATCCTGGTTTTA
TCTTATTACAAAATGGCTGTACCACAGCACTTTTCCGAATCTTTTGTCAT
TTTGACGCGTTTGAATGCTGAGGGGACTCTAAGAAAGAAAGCCGAAAGTA
CGGTATTGCAAAGGAGATAATCATTGTATACAAAAATACCCGTGACCAAG
CTTGTAACTAACATTTTTCAATTACTTTTACTTCGAAGTTCCATCATCTG
GCATAGATGTGCAAAAAGAAAAGGAAAAAGGTAAGATTTTCTTTATAAAA
AAAATAATTTTAAAAATGGCCAAATAATACATTTTGGGGGAGGGGATAGA
GTCAAAATCAAGGATTACAAAAAATAAACAGAAGTTCAAACATTTATCCC
AAAAAAGATTAAATTTTAGGAAAAGAGTCTGGTAAGGGTCCCAAAATTCA
CAAAATTTCGGGTTTTTTCATGTCGATTACAGTATAGACCCTATAATTTC
ATACTTTCAAAAATCGCGCGGGCACTCCTCGTCATTTTGCATGCAAACCT
AGTACCCTCCCTCCTGGGAAACAGAAAATCGGACAAAATATTTCTTAATT
TTTCAGGCGTTGAGTTCGTGAAAAAAACGGACTGTTCGAAAGATATAGCT
TACCATTTCTCAACCGTTAAAATGAATTGGACGAATGCAGAAAGTTTTTG
TCAAGAACATGGAGGTCATTTGACAAGTATCTCAAGTGAAGAAGAGAAAG
TCTTTATTGGAGCCAACGTTGAAAGCAGGTATGCATAACTCCGGGGATTT
CTTAACGTTAATTGTAAGAGTCGAAATGAGAGAAAGTGCTGAATGTGGGT
GTAATAAGTGAGAGCTGAGTTGAGTGGTTTTGGGCACAAAGTCTAACAAT
TTATTCTCCTAAAATCGTCAAAAAAAATTCAGAAATTAAAAAAATAAGTA
CTGTTTAACTGTGGATTGGAAATGTTTTGGCTGAACAACATTACAATTAC
TGTGTAACTTTATAGTCGGAATGATGCTAAGTATAGTGACAAAAGATAGT
CTGTTGCTTAAATTATTTTGAAGATTTTTGCATTTGAACTCATCTGAAAA
AAAAATTTCAATAGTTTTCAGAAAGACAAAGGTTCCTACTTTACTTTACT
TTTAATTCATTTTTTTATAAAGGAACCTCTACAGACCATACATTGGAGCA
TTAAAACAAGGAATTGGTGCAGCACGAAAATGGCAATGGATCGACAAAAC
ATTTTGGACTTGGGGACCATCTGTCTTTTGGGGACGAAATATTGGGAGCG
GAGCCAATCAGGATAACTATGGTTTTATCTATCGTGAATCTAAATTATTG
AGTTGGATGACGCAACCAAACCTTGAGCGTGCTTTCGTGTGCAAAGGTAA
GATTTCAAAAAAGAATTTTAGACAATCAAACACTTTGCTAGGGTCAGTTA
TAGTGATTTGATTCCACCCTTAAGGATAAATTATACCCCAAAACAGGAAG
TTTCTACAAATCACTCGATTCCAAGAGATAGCTACCTTGAAAAGTCAGTT
ATCATTTATTGGTTGATGAACGGCCTAACCCAGCTGGTACACAGCGTTGT
TTTAACGTTTTTCTAGCGTTATATGGACATTTTGAACGTTAGAAAAACGT
CGAAACAACGTTGTGTGCCAGCTGGGAAAGCACACTACTTAAGAATCTAC
TGGTCTCAGATCCAATCGTTAATTATTTGCATTCCTTAACTAATTTTGGT
GCTTCCCACTTTAATATTTTTAAATTATTATTTTTCCACAGTACGTACCG
ATGAANATTTCTTAACTAATTTCGGTGCTTCCCACTTTAACATTTTTAAA
CTATCATTCTTTTCCACAGTACGTACCGATGAAACGACGTCGTCTGGGTT
TCTTCTACAAACGGACAAAATGTTGGTATTGCTTGTTTTGACCATTTGTC
TTACTTTGTTTACTTCGTAGACCTTTGTTTAGGTCAGCCTAATTTTTCTT
AACGACGTACCGGCTGCTTTTGAAACTGACTCTATTTGTAGATCTTAAAT
TGTAAAATTATAGTTAAATAATTTTTTGTTGAAAATATTTATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018686TCONS_00018686Clytia hemisphaericatranscript
TCONS_00018685TCONS_00018685Clytia hemisphaericatranscript
TCONS_00018684TCONS_00018684Clytia hemisphaericatranscript
TCONS_00018683TCONS_00018683Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018684-proteinTCONS_00018684-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:190773..200715 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.09	0.06	0.09	0.05	0.04	1.42	2.43	1.29	1.7	1.52	1.12	20.14	24.17	8.59	17.96	3.55	3.59	54.51	44.11	4.16	3.79	3.15	3.07	3.84	4.67	2.6	1.25	12.06	4.84