TCONS_00018684 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018684
Unique NameTCONS_00018684
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1324

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018684 ID=TCONS_00018684|Name=TCONS_00018684|organism=Clytia hemisphaerica|type=transcript|length=1324bp
GTTTGGACAATCAAAAAGATCTTTGCATCCTACACAGTGTCCGCGACGTG
CGAGAGTGATATGggcGCAGCGTGATACAAGGAGGAACGGAGAAGAAACA
TGAAAGTTTATGTAAACAACGAAGATCCCGAATTAAAATGAAGTGAAATG
TCGAGATTGTCTTCCATCACGTCACAATGAAGAActctttaaaaaatgtt
atcgAAAGTAACCCGTGCCGGAAGAACTATGATAAAGACGGCCATTTTTG
CTTTGATTACCAGGCATTGAACTTGTGCGAATGGTGAATTGTACAGATGA
ATTCGCCTATCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCgaag
atttttgtcaaaaatacgGAGGTCATTTGACGAGTATAAAGGATGCACGT
GAAAATGATTTTATCGATGCTTATGTTGTTGGCAGGAATTTGCAGAATCC
ATACATCGGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGGAAAT
GGCTAGACAATACAACCTGGACCTGGCAGCCATCTATTTGGTATGGGTGG
GAGGATGGTAGTAAAACAACTGCTGATATCTATGGGTATTATTTTGGAAC
CAAAGACAAAAAATGGAAATGGACAGCTCAACCACTGGATAAAAGTCCTT
TCATCTGCAAAGTTCCATCATCTGGCATAGATGtgcaaaaagaaaaggaa
aaaggcgtTGAGTTCGTGAAAAAAACGGACTGTTCGAAAGATATAGCTTA
CCATTTCTCAACCGTTAAAATGAATTGGACGAATGCAGAAAGTTTTTGTC
AAGAACATGGAGGTCATTTGACAAGTATCTCAAGTGAAGAAGAGAAAGTC
TTTATTGGAGCCAACGTTGAAAGCAGgaACCTCTACAGACCATACATTGG
AGCATTAAAACAAGGAATTGGTGCAGCACGAAAATGGCAATGGATCGACA
AAACATTTTGGACTTGGGGACCATCTGTCTTTTGGGGACGAAATATTGGG
AGCGGAGCCAATCAGGATAACTATGGTTTTATCTATCGTGAATCTAAATT
ATTGAGTTGGATGACGCAACCAAACCTTGAGCGTGCTTTCGTGTGCAAAG
TACGTACCGATGAAACGACGTCGTCTGGGTTTCTTCTACAAACGGACAAA
ATGTTGGTATTGCTTGTTTTGACCATTTGTCTTACTTTGTTTACTTCGTA
GACCTTTGTTTAGGTCAGCCTAATTTTTCTTAACGACGTACCGGCTGCTT
TTGAAACTGACTCTATTTGTAGATCTTAAATTGTAAAATTATagttaaat
aattttttgttgaaaatatttatc
Run BLAST on NCBI

protein sequence of TCONS_00018684-protein

>TCONS_00018684-protein ID=TCONS_00018684-protein|Name=TCONS_00018684-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
MVNCTDEFAYHFSDVKKSWREAEDFCQKYGGHLTSIKDARENDFIDAYVV
GRNLQNPYIGAVRRGVGAARVWKWLDNTTWTWQPSIWYGWEDGSKTTADI
YGYYFGTKDKKWKWTAQPLDKSPFICKVPSSGIDVQKEKEKGVEFVKKTD
CSKDIAYHFSTVKMNWTNAESFCQEHGGHLTSISSEEEKVFIGANVESRN
LYRPYIGALKQGIGAARKWQWIDKTFWTWGPSVFWGRNIGSGANQDNYGF
IYRESKLLSWMTQPNLERAFVCKVRTDETTSSGFLLQTDKMLVLLVLTIC
LTLFTS
Run BLAST on NCBI

transcript from alignment at sc0000304:190773..200715-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018684 ID=TCONS_00018684|Name=TCONS_00018684|organism=Clytia hemisphaerica|type=transcript|length=9943bp|location=Sequence derived from alignment at sc0000304:190773..200715- (Clytia hemisphaerica)
GTTTGGACAATCAAAAAGATCTTTGCATCCTACACAGTGTCCGCGACGTG
CGAGAGTGATATGGTTGTTAAATTTTGATTCAAATCTTCAAGCAATTAAA
ATAAATTTTCTAAATTTTCATAAAGAATTATGTACAAGAATAAAAATCAT
AATTTCAACTCCCTCCCCTATAAGATCTTCTAAATCGTGCTCTCGTTAAG
CAAGAAGTCTGTAATAATAAATTGTTAGCTTTTCGATGGTATGATTTTGA
GCTACTAATGCTCTGAAAGTCAATGTGTAAACTATGTGGTACCATCTCTT
CCAAAGGTCAGCTTCGAGAAGCTCTTTCTCGACTGGAAACAAAAAGTTTC
AATCCAATTTCCCAGTGATTATTAGTAAACCATTATCTTCAATAACAGGA
ATACGTTACACGNTTTCATAAAGAATTATGTACAAGAATAAAAATCATAA
TTTCAACCCCCTCCCCTATAAGATCTTCTAAATCGTGCTCTCGTTAAGCA
AGAAGTCTGTAATAATAAATTGTTAGCTTTTCGATGGTATGATTTTGAGC
TACTAATGCTCTGAAAGTCAATGTGTAAACTATGTGGTACCATCTCTTCC
AAAGGTCAGCTTCGAGAAGCTCTTTCTCGACTGGAAACAAAAAGTTTCAA
TCCAATTTCCCAGTGATTATCAGTAAACCATTATCTTCAATAACAGGAAT
ACGTTACACGTGTAAAAAGAAATTAATCTCAATGACGGTACAATTTTATA
CCCATCGGAGCATGAGCAGTCACTGTTCACTTTGCCTGACCCTTCCCCAT
GCCTCTCACTCTGACATGGGTACCAGCAAAACTCTTCTGGGTACCCACAT
CCAGAAGTCATCGGTTTTTGTACTAATTCAGTACTCTTTTTACAAGTAGC
CCATTGGTACGACTCATAACGGGTCAATTTAACACAGCTTCTTTTTTCAG
CGTCTATAGCGGCTTTACAGTATTTCTTACTAGCTTCTGTACACGTGCAT
GCTTCTACGATTTCTCTCTGAAACTCATTGTTGGTCAATCTCATTTGACA
TTCGGGATACCAACAGTATCCTGTCTTTGAATTACAAATATATTGCCTCG
CTGATTCAGTCTCGATTTCTGCTCTGGCCATACATTTGACTTCTTGATAA
TCGAGATAATAAGGTAATATTTGACATTCCAATAAGTTTTTTTGTGATTT
GTAACAACTAGAAGCTTCCTCTGTGTTGACCAACTGGTGAAAAAATACCG
TGTATATTAAAGACCTGTAAACAAGCCTCATTTTTATTTTTCCTTACTCT
CTGAAAAGAAGAAGATTTAAGAAGCAAAAGACCAAGAAAGCTAAAATGCT
CTCCACCTAAATCTGCTAAAAATGTTGGAGCCTAATTGTTACTTCAAGTC
TATTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTTTCT
TCAATCTTTATAAATTTGGTATCATTGGAAAGATATTAGTGAGTGGAACA
ATTTGAAATAAAAAACTCTTTAAAAAATTCTAAAAGTGAAGATGAAAATG
AAGAAGAAAAAGAGGGAGATCTTGTAGAAAAGTGCTATAACTTTCATTTT
CACTGGAGAGATTCTTTGATCTTAGGAGATCATCATTGTGAAGAAATTTC
ATTAAAATATTTATTAAATATAAAGTTATGATACAAAGTTAATAAGTGAT
TGTCCCTAAAAAACAGCAAAAAATTGCAGAAAACAGCATTTTTAGACGTC
AATCAGCTTATAACTTTGTTTGATATCTATTGACTGAATGATTATATTTG
AGAATTTTTTTCACAGTGATGACTTTCGATGATCAAGGATTCCCCTCAGG
GAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCGTTTTTTTCTTCT
TCATTTTCATTTTCATTTTTAGAATTTTTTTAAAGATTTTTTTATTTCAA
ATTGTTCCACTCGCTAATATCTTTCCAATGATACCAAATTTATAAAGATT
GAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAATAAGAGTGTACACTTA
TCGTGAATAGACTTTATATTTGGATTTAAAGTCACAAAGAGCGAAAAGTA
GACGGTTTTTCCATTCCTGGTTTTTCCATTCCACTTGTTTTAATCTTGCT
GCGGTGGCAACAATTAGTTTCAAGTATTCCAAAGAATCTTGATGTATAAG
TTATCGACAAAATTTTCCAGCGTTTTTAGTTCCATAATTAAAGCATTTAC
TTATGCTTACTTTCCAATCTGTATTCTTGAAATCCTTGAAGTTTTGAGAA
GAATAAGAACAATCTTTTTCAAATTTTAGGGCGCAGCGTGATACAAGGAG
GAACGGAGAAGAAACATGAAAGTTTATGTAAACAACGAAGATCCCGAATT
AAAATGAAGTGAAATGTCGAGATTGTCTTCCATCACGTCACAATGAAGAA
CTCTTTAAAAAATGTTATCGAAAGTAACCCGTGCCGGAAGAACTATGATA
AAGACGGCCATTTTTGCTTTGATTACCAGGTATGCTAATTGTCTTTCTTC
AGCCCTGTAACATTTCTTTATTAGTTTCTTCCGCCGGCATCTAAATTTTT
GTTGACTCCAGACTTATATTTGTCTTCTCTATTGTATCAACTCCTCATCC
GCATCCGAGATATTTTGTAAAACGTCTGATAAAATTTCCGTTTGCATTCG
AAAATTTATGCTACTATTTGCAAAAAGATTTGTGAAATATGAAATCGATT
GATCTCGAAAACTCCATGAGAAGGAGTTTGGTTCTTCAGAAACACTATCA
AATATGGCATGGAGGCTCTCCGTCGTAGATGATTAAACAGTAAATTTTGG
TGTGCAAATTCATTGACTTAGTAAAACAAACAAGAAGATCTCATACCACT
AGATTATTAGTCATGTCAAGTAACACGATATCGTATTTCAACATACGGTG
TAAGATTTTGAAACTGTGTTTGTTGCAATTCCGTGAAAGGAAACATTTTA
CACCAGTATATGTTTTGATAGATTTATACAGTTTATAGAATACACTATCT
ATACACTCCCTTCTCACAGACCCGGTAGGATCGTTCCAGCCAGTGGGGGT
AAGAATAGGACTAAAACTTGATTGGGGATTTAAATTCCACTGATTTCAAA
CAGTCAGACAAATTAGTAGGGATGGGGAAAATAGCATAATATTTTGCAGT
GAGGATTAGTTGATTTGATTATTTTACAGTGGGGACAAAAATTAGACTAT
AATTTTCCAGTGGGAAGGGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTAT
CTATCATCAAGGTGTCTGACTAGATTCTTCAGCCCACAAACCAAAACTTG
CTAGTGCACTCGGTATATTTTGGCATCTTAGCTCCCTCATTCCCTGGTGT
TACACTTTGTAACGGAGATCTAACCAACGTTATCTTTCGACACCGTCAGC
ATCATAACGGACTACCGACATCACAATAATAATTTTCCATCCCAAAGTGA
CTCCTCCACGCCTTTACCTGTTTCTTCCAAAGCCATCAACAAAGTCGATA
TGTTTTTTTTTGATGTGCGTTTATAGAATGCATTTGCTGCTCAAAAATAT
CAATGCTATGTCCTCTGGTTTGAAGAAAGGTTATCAAATCCAGATATATG
TTCAATCAATTTCTATTTCACGTATTTTCAATTCAAGCTAAATTTTGACA
CTTTGAAAACTGAATCAATCGACGTAACACCTTAAGATAAAGATCTGTTC
TCATTTAATAATGTAACTCGAGGCGCAAGTTCACTTTCTTATCAGAAATT
AATCATTAAAACATGATCTAAATGATGGTTTTCTTACAATCCCCAATGAT
TGCACCTGTGCAGTTGGTTTGGACAATTTCCCCTCAACCAGCCAAATATT
AAACCAAGTTATTTCTGTTTAGGACAATTGTCTTCGAGGACTAAATTTTT
TCTTTGGAAAAGGATTTCAAGATTCACAAGGTCCTTGCATGGAGTGTATT
TAACAAATTACATAGAATATGGTCATCCGATCTTCTCGAGCAAAAGCTCA
AAGTTAAAGTTTTCAAATCTGTTATTGAACCTATTCTTCTCTATAGTTCG
GAAACATATGGTCTCTAACTCGAAAATTGGGAAAACAACTAGACGGAACA
GATACAAGACTTTTAAGAAGAGTTAAAAATCTCTCTTGGCATGATAACCC
CAACAAAAACACCATATATGGTTCGCTTAAGCCTATTCTACCATCTTAAA
AGCTAAGCGAGTCCAATCCACTGGTCATTGCCTTCGCGTGACCTCAGAGG
TTGTCTCGTCTCTAATTCATTGGAAGCCCAAACTTGTTCCGCAGAGGTTG
AGGAAATTTACTTTCACTGACGCAGTGAGCAGGGTCACTGGACTTAATTA
CCGTGACCTGGATACTGCTATGCGGGACCACGACTCCTGGTGCCAGAGGG
TAGAATCCACCGTGGTCGAAAGATGATGATGATGTCCTTGAGGGTAATTG
TTCGGGGGTAAACTTTCCGGGGATGTTTATAACACTTCGAGGCGAAGATG
CAAAGACAGCGGAAATTTCATAAGAATATTTTTGGATCATCACATTCTTC
GAATTCGAGTAAATAAGTCAGCTAGTAGAATGGCTCCAGGGATGGATTGC
CTGGTGTGAGGTGACCATGAAAAGACAAAAGCCAAGTTTTTCATTAACTT
GATACTGTAGATCCGCTTCGATCCGCTCAACTTTAAAAAATACCCCCTGA
CTTTACAACGCCTTTCCCGGGTGTTTATTGGTTCATTGACTTTGTTTTCC
TCTGTTACCTTTTTCCAAGCTAAAAGATCTCAAATTGGTTTTACCAAGAG
TCTCCCTTATTAGCCTAAACAAGCACAGTAAATTATTAATGAAATCATCT
TTTTCTCACAAATTTTAACATGCTGACTGATTAAAAGATGAAGCAATGTT
CTAGATAATAGGACGCTTAAGGGCATTAAAAGTTTTTTTATAAGAACACC
CAATAGACCATTTTGTCCATTTCCCCAAGAAATCGCGTGTTTCAGAGTCC
GTAAAGCCTCAAAATGTTCTTAAATTTTGGTCATCGAAGCAATTGAAGCC
ATGTTCTTATAATTGTAGATATCAGCATGCGTTCGAATGATCAAAGATGA
AGAAAAGTTCTAGGTAACAGGACGTTTAAGCGCAATTTCTTTATCCCTTT
AGAAGCAAGGCTGAACTGGTTTTAGAAGCTTATTTAGGAGATCATGGAAT
TTAAATAATTTGCAATTTAGCAATCTTGAAAGCATGCATTAAAGGGACCT
ATTATGGTATTATCAACAATCAAAGAAGTAGGAAATTTAGTTTTAAAGAA
ATTAAGTAGGAAGTTTTTTGGCATTAAATCTTTGAAAAAAATTGACCAAT
TATCAAAATAGGAACATGCAGTGATTTCATAAGTATTGTTGAAAAGTGGG
AAGTGGGAAACGTACCAAAATAGGTATAAAGAGGCCTGAAAGATCAGTAA
GTGTTCAAAGCACATCATTAGAAGTTCGAAGATTGTACTTAAAAAAGAAG
ATTGGTAACTACTTTAACTGTACGAGGATATATTGGAAGTTTCGTACACT
TTGAAGGACCTTTTGAAGATATGGCAATCATTTCATTGGCGCTTGTAGTG
TTTCTCACATATGCTTCGGCATCTGATTCGGAAGGTGAGAAAACCATTCC
ACCTCCAGGCTAAGCTTTTTGCTTTAGAACTACTCTATTTCTAAATGAAA
GAAGCAAGGAAAGACACTGTATAAGTAAGCAAGTGTGTGACCGCAGTTGG
AGGTGACCCGAAGGCTCCTCTTTCGATAGCTATCTACCCGAAGGTAGGGG
AGGGCGCCACTCCTTTCCCTGGATTTCTCCACTTACCCTTGATCCTTCTC
TTTAATTCCTGAGCATCAAGCAGAGAGGCATCGAGTACCATTTTGGGAAT
CTTTGGTAGGACCTGGCTGGGGGTTGAACGCACAACCTTGCGCACCGTAG
CCGGATGCTCTACCACTACACTACGGTCGCTAAAATGATTCAAAAACATC
TATGTTTGAAGTATTCAATATTGAAATTAAAGAATATTTAAACCAAAAAA
TATTACTGGAACCTTCCAATAATCAATAGGGCTCAAATTTTGAGAAATTT
AAGAAGAGTTATAAGGTTTTAAAAATGGAATCCAATCAAAACTCCATGGA
CCTTTTCTTTTCAGGCATTGAACTTGTGCGAATGGTGAATTGTACAGATG
AATTCGCCTATCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCGAA
GATTTTTGTCAAAAATACGGAGGTCATTTGACGAGTATAAAGGATGCACG
TGAAAATGATTTTATCGATGCTTATGTTGTTGGCAGGTATGTACAAGTTT
CTTAATCAACATTGAACCTGAGCTTAACAACTACTGACCAAGGATTTATT
ATACACTGGATATACAAGTACCTGATTTTTGCTGATTTCTCGTGTACTAG
CTATGTCCGCAGTAATGATATTATTGTTCANACACTAGATATACAAGTAA
CAGATTTTTGCCGATTTCTCATGTTCTAAGCCATGTCCACAGTAATGATG
TTATTGTTCACCCTCCTTCCCTCATTAAATGATTTTTCGAAGCATTTTTA
TTGCATTTCTTATCGAAAATCACTCATCCAATTCCCAAAAGAGACTTAAA
ATTTTCCAGTGAGAGTCAAATTCTTCAAGTTAATTGCTAATTATAAGTCG
TTATGATGTTTCAAGTTGTGAGAAAGATGCAAAAGATGTCTTATGTGTAA
GAAATTGAATGCTGACACCGGAAATTTTCAAACTTCAACCACAAAAAAAC
CACCTTGCCACCGCGTGCCTCCAAAAGATTTTCATACCACAGTGACACCA
AGACACTCAAGTCTAATGTTTGTTACTTTTATATCTCGTGGTAACAGTTT
TGGAAAGATATTCCCAATTGAAAATTTCGTGTTACTATAAGCATTTTGTT
AGATTTTTCTTGTCTAATGATGTTTTTCTCACATTAGATCTCACAAATGT
ATCCGGCTTGGTATTCTAGCCTTACTTTCAAAATTTTTTCCCTGCAAAGG
TACGAAAAGAAAACGCTAGGGAACTTTTTTAAAATGAGATTAATAAGCAT
TTTTAAAAATCAGATACTTTCGAGCCGCCGTGACAGTTGTCCTTTGTGGA
CAAAGCTAGAACAACAATTGTTTTCTGAAACAAAGGAAATACAATGGTCG
CTCTCCACCGTTTTATGAGTCATTTATCCAAGAGTGAACAATAATATCAT
TACTGCGGACATAGCTAGTACACGAGAAATCGGCAAAAATCTGCTACTTG
TATATCCAGTGTATAATAAATCCTTGGTTATTCTAATCACGCTAACATGG
TTTCCACATTTTAGTAAAAAGAGTGCACACTTAAAGCGAAAGTTCTTGGC
CTAACAAAAGTTTTGATTTATTTCGCAGGAATTTGCAGAATCCATACATC
GGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGGAAATGGCTAGA
CAATACAACCTGGACCTGGCAGCCATCTATTTGGTATGGGTGGGAGGATG
GTAGTAAAACAACTGCTGATATCTATGGGTATTATTTTGGAACCAAAGAC
AAAAAATGGAAATGGACAGCTCAACCACTGGATAAAAGTCCTTTCATCTG
CAAAGGTAAAACTCCATTGTTACAAGGTCCCATTCTCTCCGATCTGCAAT
TTCTCAAGCATTAATTCACATGACTAATTTCAAGCTACCAGACGCACTTT
TTGAGTTTCGGTATATTTCATATCCTTTGTGTCGTACTTGCAGTATTTCC
ACTGGGAATTAAGATTTCTGCAAAATTCGAGTGGCGCCATCCTGGTTTTA
TCTTATTACAAAATGGCTGTACCACAGCACTTTTCCGAATCTTTTGTCAT
TTTGACGCGTTTGAATGCTGAGGGGACTCTAAGAAAGAAAGCCGAAAGTA
CGGTATTGCAAAGGAGATAATCATTGTATACAAAAATACCCGTGACCAAG
CTTGTAACTAACATTTTTCAATTACTTTTACTTCGAAGTTCCATCATCTG
GCATAGATGTGCAAAAAGAAAAGGAAAAAGGTAAGATTTTCTTTATAAAA
AAAATAATTTTAAAAATGGCCAAATAATACATTTTGGGGGAGGGGATAGA
GTCAAAATCAAGGATTACAAAAAATAAACAGAAGTTCAAACATTTATCCC
AAAAAAGATTAAATTTTAGGAAAAGAGTCTGGTAAGGGTCCCAAAATTCA
CAAAATTTCGGGTTTTTTCATGTCGATTACAGTATAGACCCTATAATTTC
ATACTTTCAAAAATCGCGCGGGCACTCCTCGTCATTTTGCATGCAAACCT
AGTACCCTCCCTCCTGGGAAACAGAAAATCGGACAAAATATTTCTTAATT
TTTCAGGCGTTGAGTTCGTGAAAAAAACGGACTGTTCGAAAGATATAGCT
TACCATTTCTCAACCGTTAAAATGAATTGGACGAATGCAGAAAGTTTTTG
TCAAGAACATGGAGGTCATTTGACAAGTATCTCAAGTGAAGAAGAGAAAG
TCTTTATTGGAGCCAACGTTGAAAGCAGGTATGCATAACTCCGGGGATTT
CTTAACGTTAATTGTAAGAGTCGAAATGAGAGAAAGTGCTGAATGTGGGT
GTAATAAGTGAGAGCTGAGTTGAGTGGTTTTGGGCACAAAGTCTAACAAT
TTATTCTCCTAAAATCGTCAAAAAAAATTCAGAAATTAAAAAAATAAGTA
CTGTTTAACTGTGGATTGGAAATGTTTTGGCTGAACAACATTACAATTAC
TGTGTAACTTTATAGTCGGAATGATGCTAAGTATAGTGACAAAAGATAGT
CTGTTGCTTAAATTATTTTGAAGATTTTTGCATTTGAACTCATCTGAAAA
AAAAATTTCAATAGTTTTCAGAAAGACAAAGGTTCCTACTTTACTTTACT
TTTAATTCATTTTTTTATAAAGGAACCTCTACAGACCATACATTGGAGCA
TTAAAACAAGGAATTGGTGCAGCACGAAAATGGCAATGGATCGACAAAAC
ATTTTGGACTTGGGGACCATCTGTCTTTTGGGGACGAAATATTGGGAGCG
GAGCCAATCAGGATAACTATGGTTTTATCTATCGTGAATCTAAATTATTG
AGTTGGATGACGCAACCAAACCTTGAGCGTGCTTTCGTGTGCAAAGGTAA
GATTTCAAAAAAGAATTTTAGACAATCAAACACTTTGCTAGGGTCAGTTA
TAGTGATTTGATTCCACCCTTAAGGATAAATTATACCCCAAAACAGGAAG
TTTCTACAAATCACTCGATTCCAAGAGATAGCTACCTTGAAAAGTCAGTT
ATCATTTATTGGTTGATGAACGGCCTAACCCAGCTGGTACACAGCGTTGT
TTTAACGTTTTTCTAGCGTTATATGGACATTTTGAACGTTAGAAAAACGT
CGAAACAACGTTGTGTGCCAGCTGGGAAAGCACACTACTTAAGAATCTAC
TGGTCTCAGATCCAATCGTTAATTATTTGCATTCCTTAACTAATTTTGGT
GCTTCCCACTTTAATATTTTTAAATTATTATTTTTCCACAGTACGTACCG
ATGAANATTTCTTAACTAATTTCGGTGCTTCCCACTTTAACATTTTTAAA
CTATCATTCTTTTCCACAGTACGTACCGATGAAACGACGTCGTCTGGGTT
TCTTCTACAAACGGACAAAATGTTGGTATTGCTTGTTTTGACCATTTGTC
TTACTTTGTTTACTTCGTAGACCTTTGTTTAGGTCAGCCTAATTTTTCTT
AACGACGTACCGGCTGCTTTTGAAACTGACTCTATTTGTAGATCTTAAAT
TGTAAAATTATAGTTAAATAATTTTTTGTTGAAAATATTTATC

Coding sequence (CDS) from alignment at sc0000304:190773..200715-

>TCONS_00018684 ID=TCONS_00018684|Name=TCONS_00018684|organism=Clytia hemisphaerica|type=CDS|length=5526bp|location=Sequence derived from alignment at sc0000304:190773..200715- (Clytia hemisphaerica)
TACGTACCGATGAAACGACGTCGTCTGGGTTTCTTCTACAAACGGACAAA
ATGTTGGTATTGCTTGTTTTGACCATTTGTCTTACTTTGTTTACTTCGTA
GGAACCTCTACAGACCATACATTGGAGCATTAAAACAAGGAATTGGTGCA
GCACGAAAATGGCAATGGATCGACAAAACATTTTGGACTTGGGGACCATC
TGTCTTTTGGGGACGAAATATTGGGAGCGGAGCCAATCAGGATAACTATG
GTTTTATCTATCGTGAATCTAAATTATTGAGTTGGATGACGCAACCAAAC
CTTGAGCGTGCTTTCGTGTGCAAAGGCGTTGAGTTCGTGAAAAAAACGGA
CTGTTCGAAAGATATAGCTTACCATTTCTCAACCGTTAAAATGAATTGGA
CGAATGCAGAAAGTTTTTGTCAAGAACATGGAGGTCATTTGACAAGTATC
TCAAGTGAAGAAGAGAAAGTCTTTATTGGAGCCAACGTTGAAAGCAGTTC
CATCATCTGGCATAGATGTGCAAAAAGAAAAGGAAAAAGGAATTTGCAGA
ATCCATACATCGGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGG
AAATGGCTAGACAATACAACCTGGACCTGGCAGCCATCTATTTGGTATGG
GTGGGAGGATGGTAGTAAAACAACTGCTGATATCTATGGGTATTATTTTG
GAACCAAAGACAAAAAATGGAAATGGACAGCTCAACCACTGGATAAAAGT
CCTTTCATCTGCAAAGATGGTGAATTGTACAGATGAATTCGCCTATCATT
TCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCGAAGATTTTTGTCAAAAA
TACGGAGGTCATTTGACGAGTATAAAGGATGCACGTGAAAATGATTTTAT
CGATGCTTATGTTGTTGGCAGTACGTACCGATGAAACGACGTCGTCTGGG
TTTCTTCTACAAACGGACAAAATGTTGGTATTGCTTGTTTTGACCATTTG
TCTTACTTTGTTTACTTCGTAGGAACCTCTACAGACCATACATTGGAGCA
TTAAAACAAGGAATTGGTGCAGCACGAAAATGGCAATGGATCGACAAAAC
ATTTTGGACTTGGGGACCATCTGTCTTTTGGGGACGAAATATTGGGAGCG
GAGCCAATCAGGATAACTATGGTTTTATCTATCGTGAATCTAAATTATTG
AGTTGGATGACGCAACCAAACCTTGAGCGTGCTTTCGTGTGCAAAGGCGT
TGAGTTCGTGAAAAAAACGGACTGTTCGAAAGATATAGCTTACCATTTCT
CAACCGTTAAAATGAATTGGACGAATGCAGAAAGTTTTTGTCAAGAACAT
GGAGGTCATTTGACAAGTATCTCAAGTGAAGAAGAGAAAGTCTTTATTGG
AGCCAACGTTGAAAGCAGTTCCATCATCTGGCATAGATGTGCAAAAAGAA
AAGGAAAAAGGAATTTGCAGAATCCATACATCGGTGCAGTAAGACGAGGG
GTAGGAGCTGCAAGAGTTTGGAAATGGCTAGACAATACAACCTGGACCTG
GCAGCCATCTATTTGGTATGGGTGGGAGGATGGTAGTAAAACAACTGCTG
ATATCTATGGGTATTATTTTGGAACCAAAGACAAAAAATGGAAATGGACA
GCTCAACCACTGGATAAAAGTCCTTTCATCTGCAAAGATGGTGAATTGTA
CAGATGAATTCGCCTATCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAA
GCCGAAGATTTTTGTCAAAAATACGGAGGTCATTTGACGAGTATAAAGGA
TGCACGTGAAAATGATTTTATCGATGCTTATGTTGTTGGCAGTACGTACC
GATGAAACGACGTCGTCTGGGTTTCTTCTACAAACGGACAAAATGTTGGT
ATTGCTTGTTTTGACCATTTGTCTTACTTTGTTTACTTCGTAGGAACCTC
TACAGACCATACATTGGAGCATTAAAACAAGGAATTGGTGCAGCACGAAA
ATGGCAATGGATCGACAAAACATTTTGGACTTGGGGACCATCTGTCTTTT
GGGGACGAAATATTGGGAGCGGAGCCAATCAGGATAACTATGGTTTTATC
TATCGTGAATCTAAATTATTGAGTTGGATGACGCAACCAAACCTTGAGCG
TGCTTTCGTGTGCAAAGGCGTTGAGTTCGTGAAAAAAACGGACTGTTCGA
AAGATATAGCTTACCATTTCTCAACCGTTAAAATGAATTGGACGAATGCA
GAAAGTTTTTGTCAAGAACATGGAGGTCATTTGACAAGTATCTCAAGTGA
AGAAGAGAAAGTCTTTATTGGAGCCAACGTTGAAAGCAGTTCCATCATCT
GGCATAGATGTGCAAAAAGAAAAGGAAAAAGGAATTTGCAGAATCCATAC
ATCGGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGGAAATGGCT
AGACAATACAACCTGGACCTGGCAGCCATCTATTTGGTATGGGTGGGAGG
ATGGTAGTAAAACAACTGCTGATATCTATGGGTATTATTTTGGAACCAAA
GACAAAAAATGGAAATGGACAGCTCAACCACTGGATAAAAGTCCTTTCAT
CTGCAAAGATGGTGAATTGTACAGATGAATTCGCCTATCATTTCTCTGAC
GTTAAAAAGAGTTGGAGAGAAGCCGAAGATTTTTGTCAAAAATACGGAGG
TCATTTGACGAGTATAAAGGATGCACGTGAAAATGATTTTATCGATGCTT
ATGTTGTTGGCAGTACGTACCGATGAAACGACGTCGTCTGGGTTTCTTCT
ACAAACGGACAAAATGTTGGTATTGCTTGTTTTGACCATTTGTCTTACTT
TGTTTACTTCGTAGGAACCTCTACAGACCATACATTGGAGCATTAAAACA
AGGAATTGGTGCAGCACGAAAATGGCAATGGATCGACAAAACATTTTGGA
CTTGGGGACCATCTGTCTTTTGGGGACGAAATATTGGGAGCGGAGCCAAT
CAGGATAACTATGGTTTTATCTATCGTGAATCTAAATTATTGAGTTGGAT
GACGCAACCAAACCTTGAGCGTGCTTTCGTGTGCAAAGGCGTTGAGTTCG
TGAAAAAAACGGACTGTTCGAAAGATATAGCTTACCATTTCTCAACCGTT
AAAATGAATTGGACGAATGCAGAAAGTTTTTGTCAAGAACATGGAGGTCA
TTTGACAAGTATCTCAAGTGAAGAAGAGAAAGTCTTTATTGGAGCCAACG
TTGAAAGCAGTTCCATCATCTGGCATAGATGTGCAAAAAGAAAAGGAAAA
AGGAATTTGCAGAATCCATACATCGGTGCAGTAAGACGAGGGGTAGGAGC
TGCAAGAGTTTGGAAATGGCTAGACAATACAACCTGGACCTGGCAGCCAT
CTATTTGGTATGGGTGGGAGGATGGTAGTAAAACAACTGCTGATATCTAT
GGGTATTATTTTGGAACCAAAGACAAAAAATGGAAATGGACAGCTCAACC
ACTGGATAAAAGTCCTTTCATCTGCAAAGATGGTGAATTGTACAGATGAA
TTCGCCTATCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCGAAGA
TTTTTGTCAAAAATACGGAGGTCATTTGACGAGTATAAAGGATGCACGTG
AAAATGATTTTATCGATGCTTATGTTGTTGGCAGTACGTACCGATGAAAC
GACGTCGTCTGGGTTTCTTCTACAAACGGACAAAATGTTGGTATTGCTTG
TTTTGACCATTTGTCTTACTTTGTTTACTTCGTAGGAACCTCTACAGACC
ATACATTGGAGCATTAAAACAAGGAATTGGTGCAGCACGAAAATGGCAAT
GGATCGACAAAACATTTTGGACTTGGGGACCATCTGTCTTTTGGGGACGA
AATATTGGGAGCGGAGCCAATCAGGATAACTATGGTTTTATCTATCGTGA
ATCTAAATTATTGAGTTGGATGACGCAACCAAACCTTGAGCGTGCTTTCG
TGTGCAAAGGCGTTGAGTTCGTGAAAAAAACGGACTGTTCGAAAGATATA
GCTTACCATTTCTCAACCGTTAAAATGAATTGGACGAATGCAGAAAGTTT
TTGTCAAGAACATGGAGGTCATTTGACAAGTATCTCAAGTGAAGAAGAGA
AAGTCTTTATTGGAGCCAACGTTGAAAGCAGTTCCATCATCTGGCATAGA
TGTGCAAAAAGAAAAGGAAAAAGGAATTTGCAGAATCCATACATCGGTGC
AGTAAGACGAGGGGTAGGAGCTGCAAGAGTTTGGAAATGGCTAGACAATA
CAACCTGGACCTGGCAGCCATCTATTTGGTATGGGTGGGAGGATGGTAGT
AAAACAACTGCTGATATCTATGGGTATTATTTTGGAACCAAAGACAAAAA
ATGGAAATGGACAGCTCAACCACTGGATAAAAGTCCTTTCATCTGCAAAG
ATGGTGAATTGTACAGATGAATTCGCCTATCATTTCTCTGACGTTAAAAA
GAGTTGGAGAGAAGCCGAAGATTTTTGTCAAAAATACGGAGGTCATTTGA
CGAGTATAAAGGATGCACGTGAAAATGATTTTATCGATGCTTATGTTGTT
GGCAGTACGTACCGATGAAACGACGTCGTCTGGGTTTCTTCTACAAACGG
ACAAAATGTTGGTATTGCTTGTTTTGACCATTTGTCTTACTTTGTTTACT
TCGTAGGAACCTCTACAGACCATACATTGGAGCATTAAAACAAGGAATTG
GTGCAGCACGAAAATGGCAATGGATCGACAAAACATTTTGGACTTGGGGA
CCATCTGTCTTTTGGGGACGAAATATTGGGAGCGGAGCCAATCAGGATAA
CTATGGTTTTATCTATCGTGAATCTAAATTATTGAGTTGGATGACGCAAC
CAAACCTTGAGCGTGCTTTCGTGTGCAAAGGCGTTGAGTTCGTGAAAAAA
ACGGACTGTTCGAAAGATATAGCTTACCATTTCTCAACCGTTAAAATGAA
TTGGACGAATGCAGAAAGTTTTTGTCAAGAACATGGAGGTCATTTGACAA
GTATCTCAAGTGAAGAAGAGAAAGTCTTTATTGGAGCCAACGTTGAAAGC
AGTTCCATCATCTGGCATAGATGTGCAAAAAGAAAAGGAAAAAGGAATTT
GCAGAATCCATACATCGGTGCAGTAAGACGAGGGGTAGGAGCTGCAAGAG
TTTGGAAATGGCTAGACAATACAACCTGGACCTGGCAGCCATCTATTTGG
TATGGGTGGGAGGATGGTAGTAAAACAACTGCTGATATCTATGGGTATTA
TTTTGGAACCAAAGACAAAAAATGGAAATGGACAGCTCAACCACTGGATA
AAAGTCCTTTCATCTGCAAAGATGGTGAATTGTACAGATGAATTCGCCTA
TCATTTCTCTGACGTTAAAAAGAGTTGGAGAGAAGCCGAAGATTTTTGTC
AAAAATACGGAGGTCATTTGACGAGTATAAAGGATGCACGTGAAAATGAT
TTTATCGATGCTTATGTTGTTGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010450XLOC_010450Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018684-proteinTCONS_00018684-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018684-exon-sc0000304-1575043694:200653..200715TCONS_00018684-exon-sc0000304-1575043694:200653..200715Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:198187..198386TCONS_00018684-exon-sc0000304-1575043694:198187..198386Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:194330..194501TCONS_00018684-exon-sc0000304-1575043694:194330..194501Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:193011..193237TCONS_00018684-exon-sc0000304-1575043694:193011..193237Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:192586..192627TCONS_00018684-exon-sc0000304-1575043694:192586..192627Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:192088..192259TCONS_00018684-exon-sc0000304-1575043694:192088..192259Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:191470..191693TCONS_00018684-exon-sc0000304-1575043694:191470..191693Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1575043694:190773..190996TCONS_00018684-exon-sc0000304-1575043694:190773..190996Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:200653..200715TCONS_00018684-exon-sc0000304-1510915933:200653..200715Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:198187..198386TCONS_00018684-exon-sc0000304-1510915933:198187..198386Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:194330..194501TCONS_00018684-exon-sc0000304-1510915933:194330..194501Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:193011..193237TCONS_00018684-exon-sc0000304-1510915933:193011..193237Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:192586..192627TCONS_00018684-exon-sc0000304-1510915933:192586..192627Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:192088..192259TCONS_00018684-exon-sc0000304-1510915933:192088..192259Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:191470..191693TCONS_00018684-exon-sc0000304-1510915933:191470..191693Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1510915933:190773..190996TCONS_00018684-exon-sc0000304-1510915933:190773..190996Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:200653..200715TCONS_00018684-exon-sc0000304-1491911889:200653..200715Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:198187..198386TCONS_00018684-exon-sc0000304-1491911889:198187..198386Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:194330..194501TCONS_00018684-exon-sc0000304-1491911889:194330..194501Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:193011..193237TCONS_00018684-exon-sc0000304-1491911889:193011..193237Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:192586..192627TCONS_00018684-exon-sc0000304-1491911889:192586..192627Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:192088..192259TCONS_00018684-exon-sc0000304-1491911889:192088..192259Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:191470..191693TCONS_00018684-exon-sc0000304-1491911889:191470..191693Clytia hemisphaericaexon
TCONS_00018684-exon-sc0000304-1491911889:190773..190996TCONS_00018684-exon-sc0000304-1491911889:190773..190996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:190773..200715 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0930845	0	0	0	0	0	0.0535314	0	0	0.61074	0.0521406	6.30385	9.73909	2.00152	1.49722	0.680336	0.515872	21.5946	10.7612	1.36911	0.132973	1.02687	0.337256	1.58965	1.89426	1.53047	0.78881	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018684 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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