XLOC_010524 (gene) - C. hemisphaerica

Overview
NameXLOC_010524
Unique NameXLOC_010524
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000306:196249..199925-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010524 ID=XLOC_010524|Name=XLOC_010524|organism=Clytia hemisphaerica|type=gene|length=3677bp|location=Sequence derived from alignment at sc0000306:196249..199925- (Clytia hemisphaerica)
CTTTGACTTTGGTAACACACGAAGTATTTTTTTATGTTCTGAAGAAAATG
GCTAACAAAAAAGGTAAGTTGGGTAAAATAACCGGCTTTGAAAGAAATTT
GGATATTTTACGGTTACTAATTATGAAGGTTCTTATATGATAGTCCATTT
CTTTCTTAAGATGTTACTCACCATAGTTTCTACCCCCCTACATTTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGGGGGGGGGGTCTTCTTAGATAAGGGGATCTTCCTT
GAATTATGCGAAATTTCAACTTTTTCATTTATACTAATTTTCTAAGGGGG
GTGTGAAATTTTAAATGAATTTCCTAAGAGGGGATTAGCACTTAAGGGGG
TCCTCTTACCTAAGGGGGAGTCTTGAACCCTCTAGAAACTTTGCAGACCC
CGTGAGATTTTTTCACTTAGTCGGAATAAAAATAAAGAAATCGACTGAAA
CTAGATGGTGATCGATCTTTCCATATTTTTTTTACGGCAAGGGATTTAAA
TACCATTGTTTTCAAGTCAGAAAAATAGCACAATATTTTGTAATGAGGAT
TTGTTTATTTGATTATTTTCAGCGAGGACAAAAATTGAAGAATAATTTTC
CACGGGGACGATATTTTTGCCCATTTTTCTAGTGGGAGGTGGTCTCAATC
ACAGATTTCTGTAAAGCCCGAAGGGCTAAATGTCGTGCTTTAAGCCATCG
CAGGCAAAAAAAGAGAAAGTCGCAAAAATATTGTTGCTAGTATTTTCGAA
AACCCACGAATCTTTTGATTGGTCAAGCGCTGAAACCCTACTGTAATGTC
ACGTGGCCTAGGCAGGAGTTCCTACCTAATACAGTACACTTTTCAGCCAA
AACACGAAATCTAGCCCTTCGGGCTTTATAAATCTATGGTCTCATCGGGT
CTCTGAGAAGGGGGTGTTTAACTGATAATGATGTCTTTAATATTTTTTTC
AGTTGAATAGTAAGGTAACGAAATTAAGGTACAAATAAAAGTTTACTGTT
GACTCTTGCTAATTCGAACTCGAAGGGGGGATCTTATTTGTTCGAATAAC
AGAGAGATTTGTATTAAAGACAGTAATTTAACAGGGTTTTGCCCTGACGG
GAGCTGAGAATAAGTTCGAATAATAGAAGTGTTAATACGCGAGAGTTGAC
TGTCCCGCCTAGACTTCTAAACTAGTTTGATTCAGTCACTAGGATAAATC
TGATGGTAAGTTGTGACTGAATAACAGTATTCAAAGGCAAAATTAAAACC
CACAAATTTAAAATGTCTTTAAAGCGCCGAAAACGCTATAATATTGTCTA
TGCCATGTGTCTTAGCCTTGTGAATACGGGCTTACTCTCGCGTACCTAAT
AGCCGTCCCCCCGCTAATAAATTTTCCACCCAGGACATTTTTATTACAAC
GCCCCCACCCCCGCTTATCAAGTTTTGAGATTCTTTCCAACCCCCCCCGG
CTATTAGGTACCCGAAAGTAGTTAACTAGGTTATTGACTGTTTATATTTT
GACTTATAGGACTGCTGATCGCGACCCTTATCATACTCATCATTGTCGTT
GCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAGATGTTGACAACAA
GAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACAAAGCAAGGTGGAA
TCGAAGGGAAAATCATCAAAGTAACCAGAGATGACGGCGAAACAGAGAAT
GTGTATCGATTTCGAAATGTCCCGTATGCTGAACCACCTATCAGAGGTTT
AAGATGGAAAGCTCCTAAACCAATACAGAAACAAAGTAAAACATTGAAAT
ATAGTGATCAACAGATCTGGTGCGCTCAGATTCAACCCCCCAATAATATC
CTCAATATAACTGAAGATTGTCTTATATTGACTATCAGGCAACCGGAATC
TGCAACTCCTGATCAACCTCTACCAGTATTGTTCTGGATTCATGGTGGAG
CATTAGCTAGAGGATCAAGCGATTGGTACTACCCTGATGAACAAACTTCA
GCATCTCTCGGTATGGTTACTGTATCCATAAACTATCGATTAGGAATCTT
CGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAATGATGGTGAAGAAG
GACAATATGGCAATTTTGGGATCCTGGATATGATCGAAGCATTGAAATGG
GTTAAAATGAATATCCAATTTTTTGGTGGTGATCCTAACAAAGTGACAAT
CCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCATTAATAACATCAC
CTCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGCAAGTGGTTATCCA
GTATCTTTAGAAACGACTTATCAAAGAGCTGATTCGAGATATGGTTCCAC
TTTCAAAGAAGATTTAAGATGCTCAAACGGGAATGATGGAGATGTAATGA
CCTGTCTTCGTGATAAAACAATGACCAGTATTCTTGACAAGGACCCTTCG
ATGATGAGACCTATAAACGGATCCTCTTGGGTATTCCCTTTCAATCAAAG
ACTCAACGATTACCCCATTCGTGTCATTGATGGTGAAATCATCAATACTC
CTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGCTTGAAAGTTCTTATA
GGAAATACTGCTGCAGAGTTACCCCCACAAAATGCAACTAAAACAATCCA
AGGACTTGAGGAGTTTCTCAAACCAAGGATTCTAAGTTTCACCGATATGG
ATACTTATGAGGAATTAATGAATCTGTATCGCCAGAAACGTCCTGAGGAT
AAAACATCTCCAGCTGTTATAACACCACAGTTGGTTTACCTCCAGATGGC
TGCAGATGTTGTTTTAAGTTGCCAAACGAACGATATTGTCCATAATATAT
CAATAGAATCTAACTTAACGGTGTACCGGTATCTCCATAGCCAGCCTTTA
TCGGAAAACTGGAATAACGATAAGGAGTATGAATCAACGGCGTACCATGG
AATTGATACCGATGTTTTATTCGGGATCAAGTATTATTACCCCGATTTTA
ATATTACGGACAGTGACCAGAAACTGATTTTGAACTTCCGTCAAATTGTT
AAAGATTTTGTTTATAGTGCGCCTGAATTTGACACCACCTATACAAATAA
AACCATTGAGTTTTGGGATGATCGAATCTTGACTTGGGATAAACCATACC
ATGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATTTTTAAAACGAGCT
TGGGGACAACTTGGTTGATTTGAAATTTATGAATCTAAAGATATGGAAAC
ACGAAGCGACTATTTAACCAAAACTCGAATAAATGAACCTATATGACGAA
CAGTGTCCCGAAAAAGCGGACAATTTTTTTATAAAGTAAAATCCTCATAA
GCTATAGAAATCGTCATTTAATTTTTAAACGTTTAATAAATTTTCACAAA
TAGTAATCAGCATTCTAATATTCATGAAATTTCAAAAGTTTGAATAGTGA
GCTCGAATTTTCCTCAAAAAGTTCCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018793TCONS_00018793Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018793-proteinTCONS_00018793-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:196249..199925 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.06	0.02	0	2.9	2.6	4.96	6.33	4.99	4.69	8.31	5.02	13.67	13.26	3.44	5.87	1.83	1.82	5.16	4.35	2.07	2.07	1.07	1.25	8.23	10.84	0.17	0.27	7.23	6.91