XLOC_010604 (gene) - C. hemisphaerica

Overview
NameXLOC_010604
Unique NameXLOC_010604
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000313:163358..167410+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010604 ID=XLOC_010604|Name=XLOC_010604|organism=Clytia hemisphaerica|type=gene|length=4053bp|location=Sequence derived from alignment at sc0000313:163358..167410+ (Clytia hemisphaerica)
CgaacatcattttcaaaaaaaattgttttgctgttgttGTGTGGTCAGTA
GCAGTTCGCGTGGTTGGACTCTTCAACTCTTTTCTGCTGGAACTCCTCCA
CTTCTTCgccaaaaattttagattacaAACGATCCATGGGCTCTAAAATT
TCCACAACCGAAGCGAAAAACAATCAACAACTGCAAATCCAAAAATCTAA
CAAGCAACAAAGAAAGATTAAACGCAAATTCAAGAATTTATCATCAGCAG
AACACCAATTCTCCCTAGCCAATACAACGCCAGAATGGAAAATGCCTGAA
GTCAAAAGGAAATGTTTACAGTTGATGACTCCTTCAACTTCAAATTCATC
TACAGCTTGTAAACTTTTCAGTAACATGCTTTCAATCAAAACACTACAAC
AATCAGAACGAGGATCTTATTTGGCAgctttttttcgactttttggtAAA
GATGCTcccttgaaattttgcattCAAGTCATTCAAGTGTGGTGGAGGGG
GTTGTTAAACAGTCACAAAGTCACAAAGTCTAACTTTTCAAATATGTTGC
TCTAAAAAGGGTcacttttatcgcaaaaattcggTTTATTTACAGTATTC
AAGAGCCAAGTTTATGGTCCAGGCCACACCCCAAACACAAAATTCCCCAA
GCCTATATAGTTTTCTAACTTTTCTGGCAGTCTGGAGATCAAATGATTTA
GGTGTTTTTCTTCTCACAATTTTTACAAGCAGTTCTTCTTTCAATGTTTT
AGATGACGATTTCATTCAAGACTTTCTATGGTTGGATAGATGTTTTACCC
TTTGCGATAAGGTACTAGTATGTAGTATGTTGCAATTATTGTTGTGTCgt
tttatataatataaaatcGGAGATGTGAAATTTTTAAACATAAATACTAA
TTGGATAATCCCCTCAAGGGTCTACAGTCaaggaaatccctcaattgcgg
tagttgAATTTTCATTGGGAAATCATTTTACCAAAATTGAGAGGCAATCT
TGAAAGGAATACCGTACAAAACCTGAAATTCAGAACATGAACAcaaaatt
gaaacatgaatACTCTAAGGTCGTAAACTAAAGTAAAGTTGTTCCCTAAA
ACCCTGAAATATACTTGTTTAAGGCAATCTAAAGGggcaaaaatcaagaa
aaattgtCCCAATGGTGCCCCACACTCTCAATGTAAAGCTGCAGCGTAGG
AATCACGTTGCAGAGTTCTTCATCGTCTTTGACTCCCGTGTAGGAATCAG
CTTGATTCCCTGTATTACAATGATTCACTTTATAAAGGAGCCTTTGCTCA
AAGTAAACGACTCAGGTAGCTCAAATGAGGGGAATGGTGTACGTGTACca
ccatACTTCTGTTCTAAAACATTATCAAGGCCTTAAAATTCGATGGACCA
CTTTAGACAATTTAGAATTAATCACAATCTTATTTTATAGTATCTGCTGG
CGATGATTTACGTTTATTTTCGCAGAGCCAAACTAACAAGAAAGGATTTT
ACacgtcaaaatttctttcttgcACTGTAAGTCTTTCTTGGCACTTTGGT
TTTATCGTTGATATGATCGCAGAAATagactgaaatttcattaattgaCC
AGGATTTTAGCTTCATGGCAAACGGGATGCTACATTTAAATTGACTGACT
GTTGTAAAGTTTACTGTTTAAGAATCCACTGGGggctttcaaaaaattta
tccatAGTAGAAATttcgtgaatttcgaaaaaaattgcgtggttgcgtga
attgagggtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggg
ggggggggggtggctCATCCACTGTATATAAGGTACACATATGATGGACA
TTCTCGAACCCAGAGCCGCCACTGATTTTTCTGATATATGTTAGTACact
atcaaaatcataaaaagcgaACCAAGTGACTGACGTGAGTTCGAGTTTTG
GACTTTCATACTACAGGAGGAAGAAATCTTAGTTGGTGGGGGAAAACTTG
GTcacttttatgaaaatatttgtcaCTTCTCTCTTGAAGTTGATGACTAA
TTTGTCACTTCTCTCCCGaccaatttttcctctttaagGTATCACAAAAC
TGCATATTTCAGGTATATTGCTCATGAAATAGAAGAGGACGATGAAGAAT
TAAAAATGGAGATTTATCCATGGGCTCTTGGTTCAGAGTTGTGGAGAAGC
AAACTTAAAGAGTTTCTATATAAGAGGAACGTGTTTTTACAACGAATGAA
GTTTCGTGCTGTCGTCAGTAGAACAACCTGTGATGAGGTtcgtttttatg
attttgagctTCAAAATTACTTTAAACGCTTTCTTAGTAACATCagatat
aaaatttttcttactaAGCGGTGTCAGTATGAATAAAttaccgatttttt
tctggtcTTATGTCTGTGATCTATTTCCTTTTAACATCCCATGTTTTTAA
GTATCTTTACCAGGTCTTTGTTATTCATGTTTAAAACTATATACGATAGT
TATCAGAGTGAAGCAGAATGAACTTTACAGAAAGTCTTCCATGGTCGTTT
TATTTGGTTCCCAATAAGGATTGTTTGATAGCTTTGTTATCTACATTGTC
CTTGTAACTTCAcatatttttcagatattcGATTTATTTCCAAAACATCC
AGCCTGGCAACGTGAGAGAAACGGAAATCATGGGGGTGCCATTCGATTCT
ATAATCAAAATTTGGAGAATGAAGTTTTCAGTCCATCAAGAAATCAAATG
AGGTGTAAAGTATGCCTTAATGGGAAATCACCCATCCGAATCTCGCATAA
CACATTTATAAAAGGTATTTAACGTGATAAATTCTCTCAGAAATGATGAT
TACATCACGTCATTACATCAACGCCATTAGATGAGACCAGCCTTGCGTTG
ACGTTAAACAAAAGAGCGTTACCAGACTGTTGTCCATCCTCTAGCGTATC
TAGACAAAAAAATTGCATCTTAAGACTGTTTTACGCTTTCTTATGAATCT
ATTttcttcattaatttttttgatcaaTTTGATTAGATTGATCAATTAAT
TTTCAGCATATCCAGCAAATAAGAACGACATTTACTTCAAGAACTCTTCA
GTTGAGATCACACTTGACGACGATCACGAAGAATAATATGCGATCGAACG
TTAACGAACAGCACCTTATTTCAtatattcatattggaagttctAAGAGC
ATCCACATCATCTACGTTCCAAGATATTTATTCGAACTCTTCTAAAACGC
TCATGACAAGCAGTAAATTTAAGCTGACGCCAGCCAAATGCGTCAAGAAC
CTGTCAGTTGGTTAAGTGACTTGTCGAAGACATGAGTGACACTACGATAT
TTATTTTTCGAGCACATAGTCGCGAATACTTTACCTTCCTTCTGAGTTTA
GGGAATCTTGGAATAGATGACCGGGGTATACCTGAGAAGAATAAGTACCA
GGTATGTGAGCGCATGTAAAGAGGCAAGTGCCGTAAAACCAGAGAAATCG
TtgatatcccccgtcaacgcatCTATCAGTTTATTAATAGCGTAAGGGGT
CAGATAAGCCCTGTGTTTGAGAGTGGGTGTCAAGGGTAACTTCATCTCAA
TTTTTCCCCTGTAAGTTCCGATTCTCCATTCTGGGTGGGGCATACCTGCC
AATTTGCAAACCAGTTCCCCTAGGGTAATAATTTTTGCTTGAATAATTTG
GATTacagaaatttaatttattacTTTCTTGATGATCGAATGTAAATAGA
AATTCAATTCTCTTGGAATCTttttatgaaatcaaactaTTGATGATTTA
ATTCTTAATTGAACCAGATTGAACCATTAAACCAAGAAGccaatataaat
aaaaatttgccgCCTTTTTTGCTACGGTACTCCATTTTTTCCGTCCCACT
CGAAAACATACGGGCTCGCTTGTTCTCGGAATGTCAAGGGGCCTGGAAAT
CAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018917TCONS_00018917Clytia hemisphaericatranscript
TCONS_00018918TCONS_00018918Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018917-proteinTCONS_00018917-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:163358..167410 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.56	43.59	31.78	21.24	1.88	0.87	0.22	0.11	0.04	0.23	0	0.07	0.03	0	0.01	0.01	0.45	0.43	0.1	0	0.94	0.9	20.47	7.65	63.67	67.25	0.74	1.04	8.58	10.67