XLOC_010713 (gene) - C. hemisphaerica

Overview
NameXLOC_010713
Unique NameXLOC_010713
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000319:304426..311393+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010713 ID=XLOC_010713|Name=XLOC_010713|organism=Clytia hemisphaerica|type=gene|length=6968bp|location=Sequence derived from alignment at sc0000319:304426..311393+ (Clytia hemisphaerica)
ATAAAATGGTCAGTCTGAATCTCGAAATCGAAATGACACGTTTACTTGTT AGAGAAGTGTGTTgacttgtgtgttgaataaagTTTCAGATTTACAGCAC GCCTCGAAAAACTTGTGATCAATCTATagaaatctattttgaaaaatgta ccAGCCTTCAAACATTTAGGTAAGAACCTGATTAAAAAAGCTCTGCTTTA TTCACTACttatttttaggagattttttgttttgggattggaaagatatt ttcagaTTGAAATATTTCTGTTTTGATGCTACTGAAATTATGATGAAAGA TTTTGTGATATTTTGAGTGATATCTTGGGATCTACTTACACCCATACAAA TACGTAAggtaattttctcaaatatgtAAACGTTGTAGAACTAaactctt tttctttattttttagatcTTGAATCTGGACCAACACCAAAGAAATAACA CGTACTCGAAACAAGTATCATGCTGAAAATTATCGAAAATGTTTCCATAT CTATACCAATGATGGTTCCCTTTCTACACTGAAATTCATATAACATTGTA TCAATTTGACCGAACTTTAAAGAATCATATGGTACTTGGTATTGTAATGA ACGCAGCTAAATTTTCATGTTTCGAAaccattatattcaaatttttgtgc GTGGAGGACCGGCAGTTGATCAAGATATAATCTCTTCAAACGAATTTTTG TGAAACGAGATTTTTGTGAATATTTGACGGCTTTGCTGCTCCACGAGTAA AACAGTTAAAGGTACGTTGGATTTTTACGACttctgattttgatttttca aaattttgatttttcaaaaaggaattgttaaggaactgctcaggctgaga ataagtggatttgaaaataatgtacgttattgggactaatttgaccaaat tttgatctttcaaggggcaaaaaggggtaggtagaaaacctggcccacct ctctggcccaggccatatggcctacccttggcctaccctttggcccacct tacaactctaaaaaagatttgattcttatcattctgaaaatctgcaaacc aATTCTGAGGTTGGACTTTGGTTTTTCTGGCATTTAGAAAAACAACGAGA CTGAAATAAACAAAAAAAAATAAAAAGTTTTTGAGTCTGCATTTTATACA ACTGACATAGATTAAGGGGACCCCCGGGAGAGGGTCTGGTTAAGTCCTGT ACGGGTGCCAAAAACCCCCGTAGCGCtgtttcttcaacttttcaggactt cggagcccttttttcggaatcttcacccaaaaaaacataaagtatCAAAA TCTGGCGAAAAACTTTGACGTTGACCCgaacccgattcgaactcgggATC CCTAGTGCAAGAGCACAATGCGCTACCATTAGGCTGACTTCTATTAAAAT AAGTTAAAAATTTAAGGGTGTCCATTGGTCAGATAGACAAGACCTACGTT AAGAATAATTCACCCGCAATTTTGGCACTTCTTAAGAATAATTGACCCTC TCATCcgaagtacactattcttataaaaaaagtgtttaattCTTAGAGCA TTTAGAAGATTTGACCAATTGTTTGTCGTAAAACGGCTGATGCAATAACG CCAACGCGCTTTATGATGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAAATTATAGCGCA TCCCGACGCACACATATCATTATAACCTGGTTGTCCGAGAAtaaaatcgg ggaaaaaaatgtttgaaggtgGGCCAAAGGGTGGGCCAAGGGTAGGCCNN caaaaagttcaaattttcctatgtagtaaggaactcgataaggaactttg agactgaaattctctgtaaaaataaggaacaccaggctcagagcaaagtt aaggttccttataaaaaaaaaacgtgtagtctaatttaacgcgtaaaata attatttattgccacgcgttaaattagaaaaaccacgTGGTAGGGTTGCA TTTTTAGCGAATATAAAGAAATCGATATTAACCGATAACAATCGAAAGCA AGTAAGGTCTTAATTAGATTAGTTATTGATCACtatcgattattatcgat taaaatcgattaataTAATATTGATTGATTTCCCGTTTCAATTTCATCGA TTGGGTACGCCTGGTCTAAATAGctaacatgtttcaatgaaattttgtgt gatggaagataacaggtttttaaaagaggaaagttattttcagaactctt cttgcgcaaattttcttataaaaaacattttctctcgcGATcagtcagtg tagacctaacttttcatacaaaaattacgggaaacacatatttggacttt gtacgtCCTATGCTGCATGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNggcaaaaagttcaaattttcctatgtagtaagga actcgataaggaactttgagactgaaattctctgtaaaaataaggaacac caggctcagagcaaagttaaggttccttataaaaaaaagacgtgtattct caaaaaaaagtaaagacgaaaaacaaaattttgttcatccTTGACGTTTC GATACTTCTTATGTAAATTTTATGACCTATAATTGCCAGATgtgattttg aaattgatttatTAACACGTTTTTGCTTGTAAGCTAACATTTGCTTGTGA TCATGATACAAGAAGTATCGAAACGTCAAGGATgaaccaaaatttgtttt tcgtctttactttttttttagaatatacTCTCTCAAACTTGGGTTCTTTT GGTTAGAAACTTAGATTTTTGATCTGAAACTTGGCGATGATTTTTGTGAC CGGCTTTGATGTTCTTACTCTAAGTCTGAACTATAAGCGATTTATATCTT TGGGTTTGGTAACTTTTTCTGTCTTTTgtcaaaaaagttggtatttttcc gtttgaatttttgattttatcagaACTGCATgttgttttttcaatttctt tacgaatattttaactttcgtgtccgatttttcttttcaaagctCGGTAT TATCGCTTCTATTTCACTCTCAATTCGATAGATTCTGTTTTTTTCTGTTC GATTTTTATCTTGTCAGAGAGagtttgatatttttatctGTTCCAGTTTG ATGGTtagtttttgttcaaatttgcttttttctcaatttcttccGAGATT GATGTCATAATTTTTAAGGTCGATGGGTTTTTGTTTAAGTGTTTTACTGT CTTGATCAAATGTTTTTGTAGAGTTTGATGATTTTTCTACCGAATCTTTT TTCTGTGTTCTGTATTTTTACTTTGACTTGGATGGTTTTTGTCCCACTTT GGGTGGCTTTATCTATGGTCCGAATTTGATAATTGATTtcttcgatttcg attttttctgTCAGTTGGATAAGCACCGAATGAACTTAGCTCATTTTTGA TCGATTTATCCTATTGTGAtgctttttttttcgaaatttgattGTTCAGT CCCAAAtaagtttttcttgatttttcttgtccatttttttcttgtcaatt ttccaaataagaatttttttgctttagcTCCTGACCATTTCTTTCAGAGT CAGGTTTTCTTTTTCTGTAGATTTTAGTTTTCCGAATTTCGTGCTTTTTT CTGTCCGAGCTCGTTCAttgaattttaagattttgttttCCATGCTGACc tttccaaaattgaaatttttccaaGATTTCTCGGGTAACaaaatgcatgt cccagaatttcattattttttccgcCCCAATTCTAGCCCCTAAACcgcta aaccataacaaactatacattttggaagcatatttggatgtagaataccg tattcagTGTAACTTGATTATTTCCTCAGCAGAATTcgagttttttaaag aaaacgtgattatgacgtcattatttatgacgtcataattttaaaaagtt gaatatctcgagaaatataaatcaaaactttatgaaattcgGAACAGTGA TAAAAGACattgagatatttcaaaaaaatttgaaagtatttccgaaaatt aatgacgtcagcagaaattgcaagaattccAATTTTTGCGATAAAGTGCC GTCATAAATGACATCatatagcaaattttcaattttttgaaaaaaattct cctgtTGATGAATTTGTCTCATCATTGTCCATCTATCATTGGTCtaatca ggttttcttaagatattcTAATCatactgagaaaaaaattaagttacacc gaaAACAGCCAAATACGTtcccaaaaatgtatagtttgttatggtttagg gactggaactgggacggaaaattaatgcaattccgGGACATTCATTATAA GTTACCCGAGTTTTCCAAGATTGAAATTTTCCAAGATTGAAATTTTTCCA AGGTTGAATTTTTTCCAAGGTTGAATTTTTTCCAAGGTTGAATTTTTTCC ATGATTGAATTTTTTCCATGATTGAATTTTTTCcatgattgaattttttt ccatgattgaatttttttccatgattgaatttttttccatgattgaattt ttttccatgattgaatttttttccatgaTTGAATTTTTTTCcaagattga atttttttccaagattgaatttttttccaagattgaatttttttccaaga ttgaatttttttccaagattgaatttttttccaagattcaccaagatttg aaatatttttaaatgtttagAAATTATGtattgttttaagaaaatttttg tgtaaaccattttggttttttCTAAATCATTTTTTCTATCTTTTGATTCA GGCTCCTGTCAAAGTGCTATAACGATGTTATCTAAGTGGAGCAGTGTTGA GTGGCAGTCAGATCGTCGAACAAAAAGGAACGAAACTATAAAACGAAAAT CGATACCGAAAACCGAACATAAAGATAAAGATAGTGGGAAAGACTTGTGG CATTTGGTATCACTTTAACTTTGTTTGGATTTTATTATGTTTGGAATTTT TTCTCGTGTTCATTATTTATATATGAGGTTTGGTGTTTCGCAATTATGta gttcttttaaaactttatcAATGATATTAATAGTGACAGCGTTCTCTTTT CATTATGGTCATTATGGGTCTTATTTTCTCATACTTTTTACAAATTAATA TcattgaaaattcaaaagttttagaAAGATCGAAACGTAGGTTCTGGATT TAAAACTAACAGTAGAATTTAATGTGAAGCCTGCATAATGATATTCAAAG ATCGTTGGATTTGCTCAGATATTACACTAGCACAAAAATTAAACTTAATT AGAGTGGAACTAGAGTCAATCTAAAAATTTACATGAATCGCAACTTTTGG CACGACTCCTAGAAAATCTATGTTAATTGGTTTGAATTATCGGCATGATG CTTTTTATTCGTGTTTttctgtttgttgttgttggtgTTCATGAAGTGAA TTTCAACCGTACTTTAAAGCGCTAATCGGTCCTTTTTGTTCATTTGCTAA GAATGCTTTGTTATACTATGTTATTAACCAAATATTTCGAATCTAAAGGG ATGAAATTTTGCCGAATTGTATGTTCGTTGGTATTGTACATTTTAAGGTG AACGAGTGGTTGCTGCAAAACACTTTGAACCGTCTCAGGATTTCTTTTTA TGTCTTTGGTAATTACTTGCGTTGTGAACCCTCCAATTTGTTttttgata cacgttttttataagagaatgtttttcaactttttttgagtttaaagcct acATGTTTTGAACATGTtcatattttcaccattttgtgagtaattttgcc cattttcctaagaaatcgagaGTTTAGTGCtcaaagcctcaaaatgttcc taacttcttaacattttggccaataaatgtttttatagtttgttcttaaa aaagtgtatttgatgattttttgcgcCTTTGGTCAAAATCAATAGTTTTC GGACGGtttttatcaaatttctcaaaaaccacATTCTCCATTTGGATTTC GTTGACATCCTTATGTGATTCCGTTGGTGTCGATTCTTGATGTGTCGTTC GTCGCTCGAACGCTCTGACTGAATTATTAAACAATCATTGTGTTTTTACA CCGATTTTTGGAAACCCAAGTATTCACTGTATTCTGTATACATGTAGTGC TGGTATGGTAGTCTGTCTTGTGCGAGGAGAGCTTAAAGGAGTGGTATTTA AGAAAGACCGTTTGTTGTTACTAGCAACATGCACGTGAATAAACATAAAC CAGACCAGATCGGACAGAGAATTTCGAGACGTAATAAATCTATCATTACA AAAAtatgtttaaattcaaaaaagagcCTCAAAATTGCAAATTACAAAAA GCGATAGCTAATTTTGGACGAGCcttcaattatttttaactATTGGCAAG AACTATTTCAAGCtaattaaggtatgtgtacaccttttttccgatttttt gtcaaaaaaatttttttcagtaaaagtggaagaaaagttactggatttca ttttggtaaaattgcgatcttaaaatctttttttgatccagagttataac catttaaattttaaaacaaagttcgtctcatgatggattatttactcaaa taattgtctctttcggaaacaacaaaaacaaaagagagaattcagctgat gtttattctcacctctattgaatagtaatatttttgacacatttcactga ttactcaaataaacagcaatccactcgttaaaaatttcaaattgatgtag aaaaaaacgaaattttaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019104TCONS_00019104Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000319supercontigsc0000319:304426..311393 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.17 5 4.48 3.72 0.44 0.3 0.21 0.3 0.3 0.23 0.21 0.28 0.26 0.21 0.24 0.13 0.18 0.24 0.24 0.25 1.26 1.24 4.07 4.15 0.11 0.12 1.37 1.54 3.43 4.71