XLOC_011034 (gene) - C. hemisphaerica

Overview
NameXLOC_011034
Unique NameXLOC_011034
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000332:203605..207931+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011034 ID=XLOC_011034|Name=XLOC_011034|organism=Clytia hemisphaerica|type=gene|length=4327bp|location=Sequence derived from alignment at sc0000332:203605..207931+ (Clytia hemisphaerica)
GAAGAATTATATAATTAGAATCATGGGTAAAGTTTGCAGTGCTGCAAACT
GCACAAACAGGCAAGGTTTTCCAAagtcaacatcaaaacatttctATGGA
CTTCCAACTGATCCAGAAAGGAGAAGAAAATGGATTGCATTCTTAAATAG
AAAAAAGCTTCCTCAATTGAAATATGTCAGTGTTTGTGGTGCTCATTTTG
TGTCAGGTAAGTGCTCAACCTTACATATGATGAGTTTCTCTCGCTTTCTA
CAAAGGTTAGGACCTATTTTACACAGTGTTGGCTATAAAGTTAATGATAA
TATTTTCTACATTATTTTTTCAGGTGAGAAGAGCCAGAATTCTCTACATC
CAGACTTTATTCCAACTATTCAACTGTCACCAAGGAAGAAGATTTCATCA
ACCAAAAATTCCATCAATTCGAACACTCCCAAGAAAGTTATTTCACCTAG
GAAAGCATGGACTCCatctaaaagtttaaaaagactTCAACGCCATAAAA
AACTCAATGAGGCTAGAGAACGGTATCGCATTAAGAAAATTGAGTCAAGC
TCATTGTCAGCAACATCAAGTACAAAACAGTCAAATAAAGTCttacaaaa
tgatgaaaattctGATCCAAATGAAAATGACATTTCAGATCAAGAACCTC
TAAGTGAAATGCAAAAAATGAGTGATGAGTTAGAAGCAATGCgtgatgaa
attgaaatgttgaGAGCgaccttaaaaatgaaagaaagtgaaatTGATGA
CCAACatgaaagaattaaaaatctaGAGGATGATTTGAAAAATGCCAATG
GAAAAATAGAACAATTGACCTTTCTTGATTACTCAGAAAAAACTCTAAAA
TTTTACACAGGTTTGCCAAATATTcaagtatttgaaataatttttgccAG
CTGTTGTGAACATATTTATCACGATAATCGAAACAAATTAACCAAAAGAC
AAGAAATTTTCATGGTTTTGATGAGACTGCGTCTTGGCTTACTGGAAGAT
GACCTGGCTTTTCGCTTTGGAATTGACCAGTCAAATGTTTCAAGAATCTT
AAACAAATGGTTGTGTGTACTATCTCAAAgactttcttttttgataactt
GGCCTGAAAGGGACCAATTGAGAAAGACCATGCCAAGCTGCTTTTTAGAA
AGCTTTGACAAGTGTGCAGTTATACTTGATTGTTTTGAACTGTTTATTGA
GAAGCCATCTGATTTATATGCAAGGGCTCAGACATATTCTCAGTACAAAA
GTCATAACACAGCAAAAGTTCTCTTGGGGATAACCCCTCAAGGGACAATA
TCATATGTCTCAAAACCATATGGAGGTAGGACCTCAGATGTATTTTTAAC
CGAAAATTGTGGCATATTGAAAAACCTACTACCAGGTGATGTTGTACTTG
CTGATAGAGGATTTACAATTGGAGATTCTGTAGGGTTGTATTGTGCTGAG
TTAAAAATCCCGCAATTTACAAAAGGTAAAACTCAGTTATCCCAAAGACA
TgttgaagaaacaaaaaatttggCAAGTGTTCGAATTCATGTTGAGCGTG
TCATTGGACTCTTGAGAAACAAATTCACTATTTTACAAAGTATTTTACCT
ATAAAAATGATCATGAAAAAAGTAGATGGAACTTGTACTTTAACAGACAT
TCTAATTGTTTGTTCATCAATTTGTAACTTGTGTGACTCAGTTGTACCAG
TTGATTGAGATTTTGATTTGTTAATTTACCAGAAGCTTATATCTTTCAGT
TCACTAAATTTGTCAAACTATCGAAAGTTGATTAGCAATAAATTTACTTA
GTTATAACTTAagatttggcaaatttgggGATTTtgccaaaatccgccaa
attttaagttccagccaaaatttctttcaataagATGcttattttattgt
aaattttcttccaacaatgtaataatatcaaaagaataacaaaatagAGG
TGAAATAATACAGTGTATCCAGAAAAAATGGTACAAGAttttatataaaa
tgaaatgcTCAAAAGAATATATCCCATGGGATTTGTTTGGActactttta
taaaaaaatatataaataatatGAATATAAATTATGTGTACGGCTtctat
tttctttaaataacaaaaatattaactttGAAATGAGAGTGAGAgcattt
taaaaaagaaatttggtcaaattgtttatagaatttgaaattttcaaaat
aaagaatccAATGTTTTACTTATCAAaagaatttcataaattttatttca
accTAGCTTTTGAACAACATTCTAATTTTATGTCAAGTGCTTTCAAAGAT
AGTTTTTGTTGAATATATACATGTAGAATAAGTTTTTGATGACAAAAATA
CCCTTATTAATTTTGAACTACTAACAATATGTCACTTTTAAGCTTATAAA
CTGaagagaaaaaagttaaaatgtaACAAAAGTTACTATTTACGGCTTCT
CGATTTCTTTCTTCTGCAATAAGGACAGTACCATTTTTTGGGGGGTTTTT
TCTCTAAACCAAGACATTGTAAATGATAAGTTTTTACAACACAAGTTTTA
TCTGCACATAAAATTGTCTCAGAGTCTCTCTCTTCTTGACATGTACAAAT
GTCCTTAGAATTTTCAGTACCCTTATGGTAAATTTTAGGCTCAGTGATGT
GTGATTTCGAATACCACTTTCCAAGAAGTTCTGGTAAaacagcaaaaata
aaaaatcgtttTGCAATGTCAGTTTTCTCAGCAAGAAATTCAAGATCAAC
TTGTACTAGTTCATAAAAGGATTCTTTTTTACCATAAACATAAAAGTGGC
AATAGTTACAATTTGTCAATAGCATTTCCAATTGAACTTGGTAATAATAA
GCATGAGTCCTTTTAAGCGATATGGGTGTTTTTTCATCCCCTTTTAGACA
GAAATCTTTGTCATTTTTTGCAAGGTCTTTTAtagatttgttttcaagtt
tATATGGACACTTTACTTCAACAGCATAATGTCCAATATCTCTACAGCAG
GAGCAGGTCATGATTCCATCTGGGGTTGCTCCAAGGAAAGGGAACTCTGT
ATTTCTGAAAAGTCCGCAGTCAACAATTTTAACATCAGTGTGCTGCTTGG
ATAGCTCTTGTTTTAAACTCTCCACTGCTATCGGTTCATACTTAATACCG
TGGTCTGTTGCAACAGTTGTAAATCTCTTTTTCACTGGGTAGCAGACTTG
GATAATAGTACTCTTAGCTGGTTGACTGATATCTGTTTGACAACATAGTT
TGAAACGACTAGCAGTAATAACACCTGCTCTGGCTTGGAACCAAAGACTG
GACTTGGCCTGTTGCTTTGTATGGTTTTCAATTTCAGTTACATCATCTGG
TGAGATTTTAATTGACATGAATGTAATTAGACAGTGTCGTATAAGTTCAT
GATACAACATTTCTTCATATTTtaattgataaaatttgaataatacCCGC
TCAAGCTTTCTGGCAGCTGGTACAAATCTATCATTGTAACCTTCGATTAA
TCGTAAAATTGCACTTTCAGGGTTAGCTTTTGACAAACAGAAGTAAAAGT
TATCTTTATCAGCATCAGTTAGGTTTGGTACCatttttctggttttcacc
gGTGGAAGGACAACATCAGCTTTATCTTTACTATCTCTTTTACgcttttt
ttcatctttgtccTTACTTTTATCGTGAAAGTCAATATCACAAATAAGAG
CAAAATCAACATTGTTAATTTTTGGTGGAAGCCAACCATTTGGGTCTGAG
GTGACAGAGTCCGTAAAATGTCTTTTATAGTAGTCCATAGTAAACATGAG
ATAAAACATAATTGCACCAACGTGTGAACATGTTTCGCCAAGTCCTGCCA
TGCAAGTGCAATGGGCATTGATTATATCTCCAGACTTATAAACTCCAACC
CAAGATTGATTAGGTTTCTTGGTAAACATACTCTGTCCATGTTTGACAAG
TCCATGCACAAGTAAAGTATCATCTTTCAGTTTTTTAACCTTGACTTCAT
CAACTAATCCACTTTTTACATACTTGTAGGCCTCGAGAGACTTGTAGGCT
TTCAAGCTGGTCTTTGTGAAGTAGCTTGGAAAGTttatcaaataaacaaa
gatgTCTGCATACACTATGTCAGGCCAACCTCTGATGTCGTTAGTAAAGt
caaaatcagtgtttttcagagTATATGGGTCCTGTTTAAGATCAAGTTGT
GTTAGCTTTTCTTCATATCTTCTCTTTGCTGGATCCTCTAATTTATAATA
ATACTCAGATCTCACAATGTCTTTGCCTGATAATGatttcattttagatt
ttaaagCAAAACATCACGTTTCATTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019610TCONS_00019610Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000332supercontigsc0000332:203605..207931 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32	0.44	0.31	0.24	2.67	1.96	1.7	1.51	1.88	2.13	2.23	2.15	2.35	1.73	1.25	1.61	0.74	1.26	2.14	2.16	1.47	1.81	1.26	1.36	0.85	0.88	3.67	2.14	2.61	2.16