XLOC_011229 (gene) - C. hemisphaerica

Overview
NameXLOC_011229
Unique NameXLOC_011229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000345:88087..97655-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011229 ID=XLOC_011229|Name=XLOC_011229|organism=Clytia hemisphaerica|type=gene|length=9569bp|location=Sequence derived from alignment at sc0000345:88087..97655- (Clytia hemisphaerica)
TGTTGGTAAAAACAGGGTCATTTAGTTTGATACCGTAAGAGGAAATAAAG ACCCTGGTTTTTTGTGTTGTTGTTTTTTCTGGCAAGTCTGATTGAAAATC TGTTAACCTTGATAAAGTAAAGAAGCAAGTTTTTTTATTCAATGAGCTGA AGTAAAGTTTCCGGGTTTGTTTCTCGAGTAAAACAAATTTATCCACGAGA AAGCTTCTGATGAGGAAGTGATTGGTTTCAGGAAATTTGATTGTGCGGTA TATTATGCCCGCACATCTTGATTTGAAGAAGAATGCGAATCCAAAAACAG GTAAGCTAAGAAGTCTTCAAGAAAGAAAATACCTTGAAGGAAGTAATTTA ATTTGAAGGATGTTGGATATTTTTGGCAAAAAAACCGTCATTAAACAGGC AAAAAACCTGAAATATCACCAAAGCTGCCGATTCATTCAAATTTTCTTTC CGTCAAAATTTCTTCCTTCTTAAGGTAATTTGTATTTTGTAAGTCCATGC GTCGTTCCAACTTGTTTTAACTAAACATTCATGGAATTCCTACTAAAATA CTTTTAAAGCCCTCAAATAACATCACTCCCAAAATTACAAAACCCAAGCA CAGAAACCAGATCCGATTCCTCGAACCCTGGTCTGACAATGTATTGTTTT AGCTTTTTGTTCAATTTTCTATTGTTAGAAACAAAAGACAAGTCGCGATT TGCATACTTTTTTATCACGTTACCAAAATCTCATCTTGGGATTGGTCTAT TTTCTAATCACGTGATAAAAAAATTTGCAAAATAAATCGATTTTGGTAGG AAAGCTCCATTTTTTAGCAATAAGAAGAGACAAAAGCCTTCCAGACCAGT GTTATTATACTGACCATGATTTAACCTCTCAATCTCACGTTAAAGTCAAT CTCTTTTCCTATGCAATCCCTAAAAAAAACCCTAAAAATTCCGTACTCCA AAAATACTTCTCATTCGCACTTATCATGAGATAAATGAAATTTTTTTTTT TTCAATTGGTTAACAATACCACGTTGAAAACGATTATTAAATACACCCGC TTCTCACAGACCCGGTAGGATTTCTTCAGCCAGTGGGGATTAAAATAACG GACTAACAATCGACGGGGATTAAAATTCCATATTCTTTACTGCTGTGGAT TTCAATTCTTTTGTTTTCGAGTCAGAAGATTCAGTGGGGATAGGAAAAAT AGCACAATATTTTTCAGTGAGGATTGATTTATTTGATTATTTTCAATGGG GACAAAATTTAGAGGATAATTTTCCACCGGGGACGATATTTTGACCAATT CTTCCAGTGGGAAGGGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTTTAAA AACATTTTCAAGAAGTGCAAAAGGATTCAGCCTTACAATAATTTCTTTAC TTCTCTCTTGTTTCTTAGCAATTCAACAAAAAGGTAATTTACTCAAATCA CCATTAGAAGGGTCAGTAGTCAACGAACATTTGGTAGGTTTCCATAACAA CAACGGTAACCAACAACAACAGAGCTATGAAGTGAATGAACAACAACAAC TCAATCACTATCTGATTTACCATTCAAATCTCTTACAAAGATTCCAAAAC TCTTCAAGGTAAGCACGATTTGCCAGCATGACAATCGGTAATTTCCGGAA GGGAATTTTCAAAACTTAGTATCTTTCTTTCTCACAGCCCCGGTGGAAGT TTTTTCCCTCAGTGGGGATAAAAATTTCTATTGAAATCCCACTGGCGACG GAAATTCTATTGTTTCAAGCCTAAAAGTTCCGGTGGGGATGGTTCTGGAT TGCAAGTTTCTTCATTGAATTTTAAGTGGGGATAAAAACAAAGTTAATTT CTAGTGGCGGGCTGAAATTAATTGTAGGGTATTTTTTCCACCGGGGACAA AATTTTGGGCGTATTTTCCGGTGGGGCTGGGGTCCCAGCGGGTCTGTGAC ACAGGGTGTTTTTTCTTGGTAATCAAATCAGTTCAGTTTTACACACTCCT TGTTCAACTATAAACCCTAATAATTCTAATATTGGCTAAATGCAATAATC ATCGGAGATTTCCAGTTTAACACTAGTCACTGCTCAATATATTGTCTGTC TAATTCGACCTTTAAAGGTTTTATTTCTACATAAGTGCTTCCGTTTCATA TCAGAGACATATTTCATATCAGGACGGTGTCTGCTTGTTGTTATATTATG CTGATATAAGCAAAAAAATGTTTTTCTTTCCCTTTTTCTGACCATTCTTG CTCCAAATCCGAGTCAATCAAATGTGAAAAAGCTTATGAATTAAAATTGC TGAGTAAGCAAACGATGTCACTCTTATTTAAAAACAAAACCTTTAAGGGG ACTTGGATTTTCATTGTCTGTGCACAGACCCAGTATATGGCTAATTTCAA AATTCATTGCCGTAGAGTTACCACGAAGCGATAAACGTAAGATACAGTCT GGTACAGAGTAGGATTTTCATCGAGTGTGTCGTATAGTAGGCGAATGTGA AAAACCTTTTAAAATGCCAGAAATCGAATTAGAGAGAGCGAGAGAGAGAG AGAGAGAGAGAGAGAGTTTCCAAATACTGAGGAAGTAAAAATAAAAATTG AAATTGATTCTTTTTAATTTTTTTCAGAATTATCCAACAAAGACAACTTT TAGAACAGCAACAATGTCAAAATTCACCGATCCAATACATCAACCGGCAG AGTCCTTCAATTTCCATTGATTTACCAATCCAAATACTAACCAGTTGTAT TGAATGGGCCAAAAGTGTGCCATTACTTAATGGTAGGTTTACTACATGTT TTCTTTATAACAACAAACTACATAAGAACATAAGGCTTCGACGCAAATTT TTTTCCGTAGACGGGCGGAAATATCTTTAATGTTCGGAAATATCATAGCG TAAAGGTCGGAAATATCCAAAACTCTAAAAATTTGAAAATTTAATGGTCG GAAATATCCCGCGCTTTTAAAAATGCTTCATCAGCAAAAAAATGTAAACA AAGATNATTTTGGAGGTGTAAGCCCTAAATATGATGACGACGGTACGGAA ATTAACAAAGAAAGACAGACAACACAGCTGATGTTCTGTTCTTTGTGACA CGAATTGATGATGAAAGCGATTTAGATGATGATTGTGAGTGATGGGGAAG ATATCAGAAACATTTTTGATGTTCTCAATGACAAGGTGACGACGAAGATG AATAAGAGATTTACACGTTTTGTCTGTATTTCGTTGGAAATTCTTTAGTT CGTTCTGTCTCTACAAGGAAAAAATCATAACATTTTTTTTTTGGGGGGGG GCGCATTTATTAATTTCGCATTAATTTATTCTCGCATTAAGTCCAATCTG GATCAACTATCAGCAGCTTCTCTTTTATTGCTTTCTTGAAAGGTTTCCCT TCATTGTGGAAGCTGATAGGCTTGTCCAAGTTTTTTACTTTCGGTTTTAA ACCATTGCTGATCTCATCAATCTATGCTATGATTTGATTGCTTCTGCAAA AACCTTTAGGACTTGACTGTGACGTCACAGTGATATCCATCATGGAAGTC TATCGTGGCTTGGATCAAGAGATTTAAGTTTTGGTCTTTCATACTTCTAT TGTGGCGATTCTATAGAGGTTTTGGGTTTCGGATTTGACGATCTCACTTT TAGTGTAAAGATTGGAATACTGCTGAAATCGATAACTTGATGATCAAAGC ATTTTTAAAAGCGCGGGATATTTCCGACCATCAAATGATGTTTCCGACCA TTAAATTTTCAAATTTTCAGAGTTTTGGATATTTCCGACCATCAAATGAT ATTTCCGACCATTACGTTATGATATTTCCGACCATTAAAGATATTTCCAC CCGTCTACGGAAAAAAAATTTGCGGCTTCGACGGCCAAAATGTTTACAAC AAGTTTAGAACATTTCAAGGTTTTACGGAACCTAAAACACTCGATTTCTG AGGAAAATGGGTAAAAATGGTCAAAAATTGGTGAAAATAAGAACATGTTA AGAACATTTTTAGGCTTAAATCTCAACAAGTTAAGAACATTCAAAATTTT TTGATGTTCTCTTAAAAAAAAAGAGCATGTACACATTTCGCCAAATCTTC TTTGTACTTCGTCTTCATTTTGTTTACGTTCATTTTGATTTTCTTGTTTT TAGGCCTTTTTGCTTAAATATTTTTAAAATGTTCTTATTTTCACCATTTT GTGAGTATTTTTGTCTCCGAAGCCTTAAAATGTTCTCAAAGTGTTCATGG TATTTCGGCCATCGAAACCTTATGTTCTTATATAGTTTGTTCTTATAAAA AACATCCCAAATAATCACATGTTATCTCAACTTTCTCAAACACATGACCC AATAAGGGCACCAGAGCCTCACTGGTCAAGGATATAAAATTTAATTTTTC AATATCGAGAAAAAAAGAACGAATTTACAATTGCTACAAAGTGTTTCATG CTGACGCAATCTTCAGGCAATGCAATGTATTGTAGATTTATATTTTAAAT CTTTAAATATGATTTAAAAAAAGTTGAAGTAATATACTTTTTATAATTTC AAAATTTTGAAATAAATTAGGGACATGTTTTTTTTTTTTGACTGTACCAA AATGCCGATTTTCAACCAACCCGGTTCAAATCGGCACTAACAGAGACAGC TGAACCCTTCCTTATCGTTATTCAAAAATAAGAAAATAGATTAGTAGCTC TGTCCGATACTTTTTGTCCGATCTTAATAGCTTTTATGGAACTTAAGATA TCGCTTGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAAATTG ATCATTTTTGAAATCTAGGTGCTAATTCTAATCGTATATATTTTCCTGAC AAGTCTATCTATCGGGGAGGTGATTTGAGATTTTTGTTTAGCTGATAAGA AAGGAACGAACTAAAGAAAACGGAAATTGTTAAAATGAGTGAAAAATTAT TAAAAAAGTCCTTTGTTTGTTTTGATCATAACTCACTCCGGCCTTTAAAA AATTACTCCTCAGGCTATTTTATGATTTTAGGCTACCTCAGGAATGCATA GAAACCTCCTCAGGACCGAATAATACCGAGTTAATGTATTTGCACTTTGG AGGACGGTAGAGTGACTGAAGCGATTTGGAAAAACCCGCAATTCCACCCC GCAAAATCGAGGACCGTAAAAGTGCTGATTTACCGTCGTCCTCAGCTGGT CAGGATCTACTCAAAATAGAACCTTACCGTCTCCGTCGCTGAAAAACACA CATACATAAACTCGCTAATGAGTCATGGAGTGAGATATGATCCAAAACAC TCCAGGATTAATTAATCCTGAAATACTCCGAATTTTGAAATTTCAAATAG CTCATTTTAAAGCCCTTCCCAAATTTCAATACATATCAAAATTTTGGGAA AATTCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAC ATGTCCTTAGACAATTTTTGAATTTGTTCTACAAAGTTACCACTCTTTAA AATGGTGTTCAACAACAATATATAAATATGATTTCAATCATCTTTATTTA CAGCTCTACCGGCAACCGACCAAATCTCCTTACTCTGTTCCAGCTGGAGT GAACTTTTCATTCTAACCTCATCACAGTACTGCGCATGCCAGGGAATCAA TGCTAAGACATTCTCAAGATTGACCAGAATCAACCGGCAATTCAAATCAC CATCACACGAGCACTCCATGCAAATGTTGGAGGAGATAATCGATAAATTC AAATCTATGAATACAGACACTAATGAATTTTCATGTTTAAAAGCTTTGGC ACTTTTTAATCCAGGTAAATATTTCATCCAAATCTTTAAATACAGACACA AATGAATTTTCATGTTTGAAAGCGTTGGCACTTTTCAATCCAGGTAAATA TTTCAAAACATCGAACAATTAAATTGTGAATTTCTTATCTACCGATCGAT TACTTCCATTGTACCCACTATTTTTACAAAATTTAAGGCTCGATCCATTT TACTAAGGAACCACAGTAAACTCTCACTTACTCGAACTTCTATTATTTGA ATATTTCTGTAATTCGAATTTCCAGTCTCCAACAAGACACCCCTGTCTCT GTGCCCCAGTGGGTGTTGATTACCCAGTGGGGTGAGAATCAAAAAACATG AAATTCACTGGGGTGAAAAATATTCTTTCAAATATTGAGTGGGGTGGCGA AAATTTCCTTGACATTCACTGGGGTGAGAAAGAATTTTTTGCATGAGCTA AATTTTGGTTAGCCTGTGTGTTAGACTGTAGACCGCTTAATTTTATCGTG TTTTAACGATATAAGGTACTGGCTAACTTTTGGTTTAGTGCTAGTAAAAA TCTGCTTCTTACATGCTACTAAATATAACTAGGAATATCATCTTGATCAG ATGGATCTATTCTTACACTGTAACAGGAAATGTAATGAGGTCTGGGGGAA GGGGCTATAGAGGAGCAGTACGTTATATCAAATTTTATGAACTCTGGAAC CTAGTAATGTTTAGTCAACATGATTTAAGTAGAGGTCTTTCTTTCAGTAT TTACGCAAGTGAGAAAGCCTCTCGAAAACCTTTCAGGCTATAACCTAGCT TTAAAGAAAGAAAGGTACAAGTACAACTGTTTGCGCTGACAGAGAAATTT TTGATTTTCAACCCCTCTCTTTTGGCATTTTCTACGTTTTAAACGTAGAC CATGACATAGAAGTCGGGTTAAATACAGTTAATATATTGAAGTGGATTTT TTTGGCTTTTTCGGATATTTCACCTTTAAAGAAGGTGAAGGAGAAAATTC TAGTGGGGTGATTTTTTGAAAGAGAAGTTCTACTGGGGTACGTTAAAATA AGGGCAATTCGAGTGGGGTATGTGTAAACTTTTTATCATTTTCAATGGGG TGTTTTTTTACTACAACATTCCAGTGGGGTGAGTGATTTTTCCAGTGGGG CTGAAAAATGAGCCATTTTTGGAAAAAGATTTCACTGGGGTGGCCAGTGG GGTGGATCCCACTGGGTCACAGAGGCAGGGGTGTAACAAGAAGAAACCCT CTTTCTATTCAGGATATGCACCATTGATTACAATGTCTTCCACGTACCCA ACAACTGTTTGGTTGAAAGTAAGTGACGTATTGACTGATTTTACGTCACT TAAAATCATCTATTGGTTCCATGATGTAATGTCAGAAGACATTGCAATGG TGCATATCATGAATAGTTTGAATTTCTCTGTAATTCGAACAGATATGATT CCCCATTCGACTTCGAATCAATGAGGATCAACTGTGCTGTTCTTTCAACA AATCGCTCGTGTGATTTTTTGACTTTTTCATCGGCAAAGTCAGCTCATAT TAAAACATTTGATTAACAATTCCCAATAACAAACACAAAGGAATGATCCA TGCTTAAAGATAATACAACCCATAATTTCTTCTCCTTTCTTTTAGACACC CCAAGAATAAGCAATGCAGCTCTGATCGAACATTTACAAGAAAAAGCCCA AACAGAACTTGAAGATTACCTACGACAGAGCTCTTCTCATCCATTCTCGT GTCGCTACGGAAAATTACTGCTTCGTTTACCGGCTCTATCACTTATACAA GCAGACACCATGGAAACAATGTTTTTCGACGGAAATCTTGGAAATTTTTC AGTAGTGAGTTTTATCAGATCAATTATAACGTCGGCAAATGATACCAAGT TTGGAAGGCAAATCAACTTCAATCAAAAGGATCTCGGCAACGCTCTAGCT TCCAATCTTTCACATTAGTCTGGGTAGACAGGTTTAGAAGGTTTTTTTAA TTTTAGACCAACTTCGGGGAGGTATGTCTGCCTTGGTTCCTGCTTAGCAT GTAAAAACATGTTCATCGCCACGAATTATCTATCGATACTTGAAGGTTTT AATTTTACATATGTGTTGCGTTTTCATATCAGACACATATTTCATATCAG GACAGTGTCTGACTATTGTTATATTGTGCTGATATAAGCAAAGCAATATT TTTCTTTTCCTCTTTCTAACCAATCTTGCTCCACATCCGTATCAATTCAA TGTGAAGTTTGTAAATTACAAGTGATGAGTAAGCAAACGATACCACTCTT ATGTAAAAACAAAACCTTTAACTTAGCTAATGCAAGATATACAAATGGTA AACTTACCTCAAATAACGGACGGATACCATCAAATTTATTCTACAATTCT TCTTCGCAATGTTAGCGTTTTAACTTTGCTGAGTAATTTGTCGAAATTGG CCTGAATCGAAGAAAAAGAAAACATTGATATAATAAGCCATATAATTTTA AGGATAATTACTGCAGCTTATGACTGAAAAACAAAAGAGAATTGTGGGAA AAATAAGTCGAAAGAAATTTTTGTCATGGAAGAATTTGTTGATTTTTTTG CAAAAGATTCTGTCTTCGATTGAACAGAGAAGAAGCTTGCTCAACCTCAT AAAATTTCAGTTCATTTCACCGGTAAAATTTCTTCGGAAGCAAAAAAGCA AAAAAGTGGGCGTGGCGGATACTTAAAATTTGGACAAAAGAATCTGAACA CAGTTTGTGAAAAGTTCTCTTAGGGGCTTTCAATAACGCAAATTTTTCCT CGCCAAGTATTGATTAGTTTATTTTTCTCGGACAATACCCCTGACATACG TACGACCCTTGCAAACGTAGTCGGGTGGGCGGGCGCTCAGCCGGATAGGA TAGGTATAAAGTTAAACATACCCTATTCGTCACATAGAATCTTATTTAGA AAACTCTATAAATATTATACATTATACGGAAGATAGAAAATATTTTTGAT TATATTTTTGTAATAAAGAAATCTATATTATTTTTGCGAATAAATTTATT TTTTTAAATTGAAAAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019991TCONS_00019991Clytia hemisphaericatranscript
TCONS_00019990TCONS_00019990Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019990-proteinTCONS_00019990-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:88087..97655 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.03 0.11 0.26 0.54 0.57 6.47 6.95 0.6 0.64 2.05 3.35 2.62 1.39 1.55 5.72 3.02 2.25 0.14 0.13 1.71 1.92 0.65 0.98 0.72 1.49 0.24 0.12 0.13 0.11