XLOC_011309 (gene) - C. hemisphaerica

Overview
NameXLOC_011309
Unique NameXLOC_011309
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000349:149412..155627-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011309 ID=XLOC_011309|Name=XLOC_011309|organism=Clytia hemisphaerica|type=gene|length=6216bp|location=Sequence derived from alignment at sc0000349:149412..155627- (Clytia hemisphaerica)
CTCTGACTTTGCTTTACTCCTCGATATTTGTTTTAGAGAGAAGAATACTA TAAGAAACTTTTCGGAATTTGGTGAAAACGTGGACAGAAGGGAGAATGCT AAAAATGGATTGTTTGATGTTAATACTTCTGGCTATTTTTACACAAGGTA AGATTTTTTTATAAATGTTTTATCTATTTCAAACCAAAATTCTGGCGGGT TATTTCCTCATTCACTTTAACAAATGAAAATACCCGGCAGCCTTTGCAAA CGTACATCCCTGAGCATGAAAATTACAAATTTCTTAGATGTTTCCCAGTT TTGGACAAACCATCAACACTACCGCGGGCGTCAAGAGAGTTTGCGTGACA AATAAAATGACAGATATGTTATGACGCGTGATAATGTGTCGTAATTACAT ACTTAACTAGAGAGAAAAAATCCACTTTCAATAACCTATTTAACATCGAT TTTCCTCTTGTCCTGCATTTGAAAATTGATGATTGAAGTATATTGCAATT ACAGTAGCGTAGACACGAAATTTGCTTTAGGGGGGGGCCACATGTTCAGT ATACTGTATAAAGAGTGTCCACCATGTTTGAGCCGAACGGGCTCTTCTAC CCCCCAGTGCCTTTCCTTATATTTTCGTTACCAGTCTCCACATAACGCTA AGTGTTGATGGGTGTATTCTCCTGAAGAAAATCGTAGGAATAAAATGAAG CTGAAAATTCCAATGAGGATAGAGCCTAGGTTGTCTTGTTGAATTTGGAA GTTATAGTATTTTTTGGTAAAGCTCAAAAATCTAAATATTACCTTTCCAA ATGACGAGTTCGTTATTCCATTGGGGATTAGTTTTCAGTTTGAGGACAAA TTTACGACGAGTCTTTGATAGAAGTGTATTACAGTCACACATTTTACGAC ACGTTGTTGCCCATATCAGTCTTTTGTGACAAACTTAAATTCTCATGACA CGCGACTCTGGCACACATACTAATGAGAAACAGTAAATGGTAAAGGGCTA ATCATTTCAGGAAAAAATCGGTTAGCTGATTCTATGATCATAGCATCTTT TCCAAATATGTTAAAAATTTTACAAAACTTTTTTAAGGTGAATTATTTAA ACAGAATTATTCAATATTACAGAGCCAGAAAATTAGGAAAAAATATGAAT GTGAATTGAGTAAAAATGTAAACTCTTTTTTTTTTGTAAGCATAACGTTT ATAAGCATACTTAGGTTCAAACTCGGTAAAAAAAAAGCATAATGCTAAAA GCTACCTCCAAGCTGAAATGCAAAAAAACTTGTACAGCTTCTCTAAAACG CTGACCTTTAAGGGTTACCTTTAAAGCTGTTTTAGCTTTCTTAGACCAAA GATTTTCGCTTGCGGCACCAATTTACAAAAAATCTGTAACTTTTTGAGCC GTATCAAAGTTCCGACTTAGAAATTCGAATTTCCATGAACCCAAAGAAAA TCAATAAAACGAAGTCTAAGAATATAAATTAAGGCTGAAAATAAGATTTT ACTAAGCATGCTGAGCCTCGACCCGATTTCCCCATGCTTATTAAAAAAGT GTATAAAAGAGGGATTGTTATTAACTATTGGTCTTCCAAAACTAGGTAAT ATCTTGATAAAAAATTCATAAATTCCTTGGTTTCATTTCAATCTGAAGTC CTTCCTCATTCATCACTCCATGAATAACTCCAATAGTCTCCAATAAATCC TCCGCTCGCTGCTTGGCAACAATCTCGAAATTCAATAACAAATGATACAA AGTGCATTTCATCTCCATCATTGCAAAACGCTGACCTATGCAATTTCTTG GTCCAGCTGAAAACGGTATAAAAGCGAATGGGTTCCAGTCATGCTCAGGA GAACCAAATCTTTCGGGTTTGAAAACCATCGGATCTGACCAGTTGTTTGG GTCACGCTGCATAGCTAATATGCAGATACTAAAAGTGGTACCTTTAGGGA ATTTCCAGGAATCGAAGACCATTTCTTCTTCGATTTCTCGGCTAACGATT GGAGCTGATGGATGAATCCTCAACGTCTCCTTGATTACACATTCGACATA TTTTAACTCCTTAACCATCTCATTTAGAGGGAGATTCAATTTTTCAACGT TCTTAACCTCTTCAAAAGCTTTTTGTTGGATTTCCGGATGTGAGCCAATC ATGAAGAGACACCAACTAAGAGCTGTTGCTACTGTATCATAACCTGCGAA CATGAAACCTTGCGTCTCGTTCAATACATCTTCGACATTTACTTCACCAT TTTGTAATGATTTTAACAATCTATCTAACAAAATAATTTGCTTTTCATCT GACATGGGTTTCTCCTTTAGCTGCTCAATACGCTTCTCTATGATATTGGT ACCAAACTTTTTCACGAAATCTAACGTCTCGTAAAAGTCTTGACCGACTG GTGTGAGCTGGAATGTTGTTTTATACCATTGCCAAGGTCGATCGTTGCGG TTTACAAGAATGACCAATAGGCGATCAATAGCTTTTAAGAATCTGAAAAT GTTTGCTTGGTGTTCACCTGGTGAATCTTTAACGGTTTCATTGTTTGCAA CATCCAAAGCGATATCGATGAAGTCATTTTCCACACCCATGGATGTTTCT AATATGACACCGAGAGAATAGGTTTTCATCACTTTAAACGCATTGAATGA ATCTGGTTGTTTTTTCAAAGCTTTAACCAGGTCTTGCGAATGTTTCACCA TAGTTGGTAGAAACTCTGTTAAAATGTTGAAATGAAATGAAGGCGTTAAC AACTTTCTACGCCTTCTCCAAAACGCCCCAGTACTTGTGAATAAGTTCAA TCCAAGCCAGTCATCAAACACCCAGTAATTAGAAGACTTTGTAAGAACTT TATTACTGGACATAATGGATTCGAATAGTTTAACATCCTTGCATAAAACA TTCGGTCGAAGTCCAATCCAGAGAGCTGTGATTGGAGAACGGTCTAACCA ATCCAAGAAAAGATGATGAAATTCGTTAGCTGTGAAGCCAATCACAGACG GTATATGTCCAAGAATGGGGTATATTTGAAGTGGTATATTAGATATATGG CTCCATGGGCGTGTAACGTGCAACCAATAAAATTTCAATACCAGATATGC GAATAAGCCAAATGCAACCAGTTCAAATATCATACTTATTTTCTTTTAAT TTTTTGGTAATTTTTTTAGCTGAAAAATATGAAAAAATAGATTATGAATA CAGTGCACAGAAATGCCTAAAGATTTTTATTGACCTGAAACCAATAGATG GGAATTATATTGTGTTAGTTAACATAACAGCTCGAACTTGCACAAATTGC AAAAAAAAAAGGCAACTTGTTTTAAACCAACAAACACAAACTTTAAGAAT ATTAGTCAAATATTTTGTCATACAACAACTTCAATAGAAACATAAACACG GAATTTTATCATAAGATTTTAAAGATTTACATAAGAGCAAACCCAACAGT AATTTAGAAGGTTTGTGCTTTGACCACCAGCTTACCTGGGCTAGTTCGAA TTAGCCCCGGGGAAAATAGGAAAATAGTTCCTCACAAAACCTAACTTACT TTACTCTCTACTTTCTGATTTCCAGACAATTCTATCTACGCCCAGCTGAC ACACAACGTTGTTTCAACGTTCATCTACTTTTAAATGGACGTTAAATACA TTAAATTGACGTTGAAACAACCTTGTGTGCCAGCTGGGCGTTTTCTTAAA AGTTACCTGGTTATTTATATTTTAAACATATGCATACAAAAGAAATTCAA AATAGACAGCTGTGAAGAATAAACATTTTCATAATTTCTTTTTTTATATT ATTGATAAAAACCCCTAGGAATTATGTAGTGAGGTATCTTAATTATGTAG CCATCTCGTATGAGGTATCTTAATTTTTCCTTTGTATACTTTTTAGCAAA TGGTATGGGCAACGAATGGACACCTTGGGGTCCTTGGGGACCTTTCGACG CCACTTGTGGTCCACAAACAAGATTTCGATTGAGAAAATGTATCATTAAA ATTCCATGGGACGAATGTATAGGAGATTCAATGTCGACACAAGTTATCAA CAATATTCCATGCCGTAAGTAAAATCCGCAACTTTCAATTGGTAATCGAA GGAAGTCCTCCCTAGTACCCCTGAAGTTGAGGAAACGTGGAATATTGANA TAATCGAAGAAAGTCCTCCCTAGTACCCCTGAAGTTGAGGAAACGTGGAA TATTGATCTGCGCTCGATATAGTAATAAACGCTTTTGCCCTGTCGGGGTT GGAGATTGTCGGGTATGTGCGGACCGAATCTCCAAAACTCTGACCCTTAT GGGGACTAAATTTTTGGTAAAAACGACTCTCAAAGAATCAATTTTGCCCT TTTCTCTTCCTGATATTTTGATCCCCTAAAGAGACGGAAAAAGTTAAATA ATTACCGCTCAGAAAAACTTCGCAAACCCAGTACCTTTTCTAGGGTAGGG GCGATCCCCCCAGGGCGTTTAAACTGCTAAAATTAAAGCAAGAAATTCCA TGACTTGATGATATCTATTTATTCTGTACTTGTTTAGCGACGACTGCTGT TCAAACCTCTTCACCAAAAGCTAAACCGTCAGAAGTCATCAGTGTCCCTC GACCCTTCACTGAAGGTACAACAGTGGATCCTGTATTCAGAACAGAAGAG ATCAACACAACATTTAGACCCAGGACTACTTCAACAAAAACAACCCTAGA AACATCAACAACATTTGAAATCGTACAAAAAACAGAAAGCAGCACAGTAT CAACTACACCCTCAACTACTTCAACAAAAACAACCCCACAAAAATCAACA AGAGAACCAACTACTACAAACATGAGAAACACGAGAAGCACTCTATTAAC AACATTATCGCCAATTACATCTACAGAAAGCCAATCAACGGAAACCAATT ATCAAGATAAAGGTATTTCAACGGAAAAATTTCAAACTCTAACCGTAAAA ACGACATCAACAACTAAAATGCAAACTTCGACTTCGACGGTTTCCATTGA TACTAGTAAACCAGTCAAACCAACTAAAGTTAAAACTCAACCAACAACCC GACCTTCGATTGAATCAACTGAGTGGTCTACATGGTCCTCTTGGAGTGAA AACAAAGGAAAACCTTGTGGCACATTGTTTAGAAGACGTCACAGAGTCTG CAAGAAACCATGTGAAGAAGTACAAGAGCAAGCAACGTTCAAACCTTGCA AAAAAGGTAAAACAGAAATTATTTATTCTCTGGATACACTCGAGTTAGTC AAGCAGAGGTAGAAGTAACCGTTTTAATAATGGGTATTATCTCCAGCTAT AATCTGCAGCTTTATTCAAAATTTGAATGAAGAAAATTTTAAATGGGGCA AAAAATCGATGAGAAGTGGTATGTATCACTTGGTATATTTGAAAGGCTTC GCTATTACATATCCCTGTTGAAAGTCAAGGTTCCAGATCAAGAATTTGAA TCTCTGGTATATGACGACTTTTCTTAAATTTCATTTGTCTTTCAGTTATC ACTCAAAAGTTCAAGATCATTGAGCGAATCGTTTATCAAGATGAAATATC CTCAAGCAAGAAGATCAATGTTTGGTCTTTTATCCAATGTAAAATGAAAT GTCAATTTGAGCCATCGTGTAATCAAGTCGCTATAAACAGATTAAAAGAC TCTTCATGGGATTGTTATTTTATGAGAACTAAAAATGGGAACTATGGTAT TGAAACATGGCGGAGAAAGAGAGCCTTCGATAATCCGGTGAAAGTGTTCA CTAAAGTATTCAGGTGACAAAGGAGAACTNGAAAGAGAGCCTTCGATAAA CCGGTGAAAGTGTTCACTAAAGTATTCAGGTGACAAAGGAGAACTAGAGA ACAGAGATCATTCCAATGAGCCTTTTGACAATGTACTTTAAGAAACCAAG ATGGGATTTTTTTAGCAATCGAAAGGATTTCATAGAAAAGTTGCGGTTGA CGGTTTGCAATCGTTGAGTTTAAGGGCTAAAGTTGAAACTCTCGGATGGA ACTACTACTGTCACTAGCAGTATTTCCGCATCATTCACAAAAACGCCATG TTCATAATGAAATCCATCGCAAGATTTTCGACAAATATGCTGTGTAAAAA AAAAACATGAAATTCAATTCTTTATTCTAAAAGTGGCGCTAATCTAACGG CTCCATTTTTTTCTTGCTTGAGAAAGTTGAAGATCTTTCCAAACTCAGTG ACTGGCAACTTCCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020133TCONS_00020133Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020133-proteinTCONS_00020133-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000349supercontigsc0000349:149412..155627 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68 1.6 1.14 1.06 0.06 0 0.03 0.1 0.06 0.02 0.07 0 1.78 1.59 0.03 0.1 0.07 0 3.05 4.01 0.05 0 1.76 1.52 0.05 0 0.7 0.17 0.82 1.47