TCONS_00020133 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020133
Unique NameTCONS_00020133
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1705

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020133 ID=TCONS_00020133|Name=TCONS_00020133|organism=Clytia hemisphaerica|type=transcript|length=1705bp
CTCTGACTTTGCTTTACTCCTCGATATTTGTTTTAGAGAGAAGAATACTA
TAAGAAACTTTTCGGAATTTGGTGAAAACGTGGACAGAAGGGAGAATGCT
AAAAATGGATTGTTTGATGTTAATACTTCTGGCTATTTTTACACAagCAA
ATGGTATGGGCAACGAATGGACACCTTGGGGTCCTTGGGGACCTTTCGAC
GCCACTTGTGGTCCACAAACAAGATTTCGATTGAGAAAATGTATCATTAA
AATTCCATGGGACGAATGTATAGGAGATTCAATGTCGACACAAGTTATCA
ACAATATTCCATGCCCGACGACTGCTGTTCAAACCTCTTCACCAAAAGCT
AAACCGTCAGAAGTCATCAGTGTCCCTCGACCCTTCACTGAAGGTACAAC
AGTGGATCCTGTATTCAGAACAGAAGAGATCAACACAACATTTAGACCCA
GGACTACTTCAACAAAAACAACCCTAGAAACATCAACAACATTTGAAATC
GTACAAAAAACAGAAAGCAGCACAGTATCAACTACACCCTCAACTACTTC
AACAAAAACAACCCCACAAAAATCAACAAGAGAACCAACTACTACAAACA
TGAGAAACACGAGAAGCACTCTATTAACAACATTATCGCCAATTACATCT
ACAGAAAGCCAATCAACGGAAACCAATTATCAAGATAAAGGTATTTCAAc
ggaaaaatttcaaactctaacCGTAAAAACGACATCAACAACTAAAATGC
AAACTTCGACTTCGACGGTTTCCATTGATACTAGTAAACCAGTCAAACCA
ACTAAAGTTAAAACTCAACCAACAACCCGACCTTCGATTGAATCAACTGA
GTGGTCTACATGGTCCTCTTGGagtgaaaacaaaggaaaacctTGTGGCA
CATTGTTTAGAAGACGTCACAGAGTCTGCAAGAAACCATGTGAAGAAGTA
CAAGAGCAAGCAACGTTCAAACCTTGCAAAAAAGTTATCACTCAAAAGTT
CAAGATCATTGAGCGAATCGTTTATCAAGATGAAATATCCTCAAGCAAGA
AGATCAATGTTTGGTCTTTTATCCAATGTAAAATGAAATGTCAATTTGAG
CCATCGTGTAATCAAGTCGCTATAAACAGATTAAAAGACTCTTCATGGGA
TTGTTATTTTATGAGAACTAAAAATGGGAACTATGGTATTGAAACATGGC
GGAGAAAGAGAGCCTTCGATAATCCGGTGAAAGTGTTCACTAAAGTATTC
AGGTGACAAAGGAGAACTNGAAAGAGAGCCTTCGATAAACCGGTGAAAGT
GTTCACTAAAGTATTCAGGTGACAAAGGAGAACTAGAGAACAGAGATCAT
TCCAATGAGCCTTTTGACAATGTACTTTAAGAAACCAAGATGGGATTTTT
TTAGCAATCGAAAGGATTTCATAGAAAAGTTGCGGTTGACGGTTTGCAAT
CGTTGAGTTTAAGGGCTAAAGTTGAAACTCTCGGATGGAACTACTACTGT
CACTAGCAGTATTTCCGCATCATTCACAAAAACGCCATGTTCATAATGAA
ATCCATCGCAAGATTTTCGACAAATATGctgtgtaaaaaaaaaacatgaa
attcaaTTCTTTATTCTAAAAGTGGCGCTAATCTAACGGCTccatttttt
tcttgcttgagaaagttGAAGATCTTTCCAAACTCAGTGACTGGCAACTT
CCAAC
Run BLAST on NCBI

protein sequence of TCONS_00020133-protein

>TCONS_00020133-protein ID=TCONS_00020133-protein|Name=TCONS_00020133-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MLKMDCLMLILLAIFTQANGMGNEWTPWGPWGPFDATCGPQTRFRLRKCI
IKIPWDECIGDSMSTQVINNIPCPTTAVQTSSPKAKPSEVISVPRPFTEG
TTVDPVFRTEEINTTFRPRTTSTKTTLETSTTFEIVQKTESSTVSTTPST
TSTKTTPQKSTREPTTTNMRNTRSTLLTTLSPITSTESQSTETNYQDKGI
STEKFQTLTVKTTSTTKMQTSTSTVSIDTSKPVKPTKVKTQPTTRPSIES
TEWSTWSSWSENKGKPCGTLFRRRHRVCKKPCEEVQEQATFKPCKKVITQ
KFKIIERIVYQDEISSSKKINVWSFIQCKMKCQFEPSCNQVAINRLKDSS
WDCYFMRTKNGNYGIETWRRKRAFDNPVKVFTKVFR
Run BLAST on NCBI

transcript from alignment at sc0000349:149412..155627-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020133 ID=TCONS_00020133|Name=TCONS_00020133|organism=Clytia hemisphaerica|type=transcript|length=6216bp|location=Sequence derived from alignment at sc0000349:149412..155627- (Clytia hemisphaerica)
CTCTGACTTTGCTTTACTCCTCGATATTTGTTTTAGAGAGAAGAATACTA TAAGAAACTTTTCGGAATTTGGTGAAAACGTGGACAGAAGGGAGAATGCT AAAAATGGATTGTTTGATGTTAATACTTCTGGCTATTTTTACACAAGGTA AGATTTTTTTATAAATGTTTTATCTATTTCAAACCAAAATTCTGGCGGGT TATTTCCTCATTCACTTTAACAAATGAAAATACCCGGCAGCCTTTGCAAA CGTACATCCCTGAGCATGAAAATTACAAATTTCTTAGATGTTTCCCAGTT TTGGACAAACCATCAACACTACCGCGGGCGTCAAGAGAGTTTGCGTGACA AATAAAATGACAGATATGTTATGACGCGTGATAATGTGTCGTAATTACAT ACTTAACTAGAGAGAAAAAATCCACTTTCAATAACCTATTTAACATCGAT TTTCCTCTTGTCCTGCATTTGAAAATTGATGATTGAAGTATATTGCAATT ACAGTAGCGTAGACACGAAATTTGCTTTAGGGGGGGGCCACATGTTCAGT ATACTGTATAAAGAGTGTCCACCATGTTTGAGCCGAACGGGCTCTTCTAC CCCCCAGTGCCTTTCCTTATATTTTCGTTACCAGTCTCCACATAACGCTA AGTGTTGATGGGTGTATTCTCCTGAAGAAAATCGTAGGAATAAAATGAAG CTGAAAATTCCAATGAGGATAGAGCCTAGGTTGTCTTGTTGAATTTGGAA GTTATAGTATTTTTTGGTAAAGCTCAAAAATCTAAATATTACCTTTCCAA ATGACGAGTTCGTTATTCCATTGGGGATTAGTTTTCAGTTTGAGGACAAA TTTACGACGAGTCTTTGATAGAAGTGTATTACAGTCACACATTTTACGAC ACGTTGTTGCCCATATCAGTCTTTTGTGACAAACTTAAATTCTCATGACA CGCGACTCTGGCACACATACTAATGAGAAACAGTAAATGGTAAAGGGCTA ATCATTTCAGGAAAAAATCGGTTAGCTGATTCTATGATCATAGCATCTTT TCCAAATATGTTAAAAATTTTACAAAACTTTTTTAAGGTGAATTATTTAA ACAGAATTATTCAATATTACAGAGCCAGAAAATTAGGAAAAAATATGAAT GTGAATTGAGTAAAAATGTAAACTCTTTTTTTTTTGTAAGCATAACGTTT ATAAGCATACTTAGGTTCAAACTCGGTAAAAAAAAAGCATAATGCTAAAA GCTACCTCCAAGCTGAAATGCAAAAAAACTTGTACAGCTTCTCTAAAACG CTGACCTTTAAGGGTTACCTTTAAAGCTGTTTTAGCTTTCTTAGACCAAA GATTTTCGCTTGCGGCACCAATTTACAAAAAATCTGTAACTTTTTGAGCC GTATCAAAGTTCCGACTTAGAAATTCGAATTTCCATGAACCCAAAGAAAA TCAATAAAACGAAGTCTAAGAATATAAATTAAGGCTGAAAATAAGATTTT ACTAAGCATGCTGAGCCTCGACCCGATTTCCCCATGCTTATTAAAAAAGT GTATAAAAGAGGGATTGTTATTAACTATTGGTCTTCCAAAACTAGGTAAT ATCTTGATAAAAAATTCATAAATTCCTTGGTTTCATTTCAATCTGAAGTC CTTCCTCATTCATCACTCCATGAATAACTCCAATAGTCTCCAATAAATCC TCCGCTCGCTGCTTGGCAACAATCTCGAAATTCAATAACAAATGATACAA AGTGCATTTCATCTCCATCATTGCAAAACGCTGACCTATGCAATTTCTTG GTCCAGCTGAAAACGGTATAAAAGCGAATGGGTTCCAGTCATGCTCAGGA GAACCAAATCTTTCGGGTTTGAAAACCATCGGATCTGACCAGTTGTTTGG GTCACGCTGCATAGCTAATATGCAGATACTAAAAGTGGTACCTTTAGGGA ATTTCCAGGAATCGAAGACCATTTCTTCTTCGATTTCTCGGCTAACGATT GGAGCTGATGGATGAATCCTCAACGTCTCCTTGATTACACATTCGACATA TTTTAACTCCTTAACCATCTCATTTAGAGGGAGATTCAATTTTTCAACGT TCTTAACCTCTTCAAAAGCTTTTTGTTGGATTTCCGGATGTGAGCCAATC ATGAAGAGACACCAACTAAGAGCTGTTGCTACTGTATCATAACCTGCGAA CATGAAACCTTGCGTCTCGTTCAATACATCTTCGACATTTACTTCACCAT TTTGTAATGATTTTAACAATCTATCTAACAAAATAATTTGCTTTTCATCT GACATGGGTTTCTCCTTTAGCTGCTCAATACGCTTCTCTATGATATTGGT ACCAAACTTTTTCACGAAATCTAACGTCTCGTAAAAGTCTTGACCGACTG GTGTGAGCTGGAATGTTGTTTTATACCATTGCCAAGGTCGATCGTTGCGG TTTACAAGAATGACCAATAGGCGATCAATAGCTTTTAAGAATCTGAAAAT GTTTGCTTGGTGTTCACCTGGTGAATCTTTAACGGTTTCATTGTTTGCAA CATCCAAAGCGATATCGATGAAGTCATTTTCCACACCCATGGATGTTTCT AATATGACACCGAGAGAATAGGTTTTCATCACTTTAAACGCATTGAATGA ATCTGGTTGTTTTTTCAAAGCTTTAACCAGGTCTTGCGAATGTTTCACCA TAGTTGGTAGAAACTCTGTTAAAATGTTGAAATGAAATGAAGGCGTTAAC AACTTTCTACGCCTTCTCCAAAACGCCCCAGTACTTGTGAATAAGTTCAA TCCAAGCCAGTCATCAAACACCCAGTAATTAGAAGACTTTGTAAGAACTT TATTACTGGACATAATGGATTCGAATAGTTTAACATCCTTGCATAAAACA TTCGGTCGAAGTCCAATCCAGAGAGCTGTGATTGGAGAACGGTCTAACCA ATCCAAGAAAAGATGATGAAATTCGTTAGCTGTGAAGCCAATCACAGACG GTATATGTCCAAGAATGGGGTATATTTGAAGTGGTATATTAGATATATGG CTCCATGGGCGTGTAACGTGCAACCAATAAAATTTCAATACCAGATATGC GAATAAGCCAAATGCAACCAGTTCAAATATCATACTTATTTTCTTTTAAT TTTTTGGTAATTTTTTTAGCTGAAAAATATGAAAAAATAGATTATGAATA CAGTGCACAGAAATGCCTAAAGATTTTTATTGACCTGAAACCAATAGATG GGAATTATATTGTGTTAGTTAACATAACAGCTCGAACTTGCACAAATTGC AAAAAAAAAAGGCAACTTGTTTTAAACCAACAAACACAAACTTTAAGAAT ATTAGTCAAATATTTTGTCATACAACAACTTCAATAGAAACATAAACACG GAATTTTATCATAAGATTTTAAAGATTTACATAAGAGCAAACCCAACAGT AATTTAGAAGGTTTGTGCTTTGACCACCAGCTTACCTGGGCTAGTTCGAA TTAGCCCCGGGGAAAATAGGAAAATAGTTCCTCACAAAACCTAACTTACT TTACTCTCTACTTTCTGATTTCCAGACAATTCTATCTACGCCCAGCTGAC ACACAACGTTGTTTCAACGTTCATCTACTTTTAAATGGACGTTAAATACA TTAAATTGACGTTGAAACAACCTTGTGTGCCAGCTGGGCGTTTTCTTAAA AGTTACCTGGTTATTTATATTTTAAACATATGCATACAAAAGAAATTCAA AATAGACAGCTGTGAAGAATAAACATTTTCATAATTTCTTTTTTTATATT ATTGATAAAAACCCCTAGGAATTATGTAGTGAGGTATCTTAATTATGTAG CCATCTCGTATGAGGTATCTTAATTTTTCCTTTGTATACTTTTTAGCAAA TGGTATGGGCAACGAATGGACACCTTGGGGTCCTTGGGGACCTTTCGACG CCACTTGTGGTCCACAAACAAGATTTCGATTGAGAAAATGTATCATTAAA ATTCCATGGGACGAATGTATAGGAGATTCAATGTCGACACAAGTTATCAA CAATATTCCATGCCGTAAGTAAAATCCGCAACTTTCAATTGGTAATCGAA GGAAGTCCTCCCTAGTACCCCTGAAGTTGAGGAAACGTGGAATATTGANA TAATCGAAGAAAGTCCTCCCTAGTACCCCTGAAGTTGAGGAAACGTGGAA TATTGATCTGCGCTCGATATAGTAATAAACGCTTTTGCCCTGTCGGGGTT GGAGATTGTCGGGTATGTGCGGACCGAATCTCCAAAACTCTGACCCTTAT GGGGACTAAATTTTTGGTAAAAACGACTCTCAAAGAATCAATTTTGCCCT TTTCTCTTCCTGATATTTTGATCCCCTAAAGAGACGGAAAAAGTTAAATA ATTACCGCTCAGAAAAACTTCGCAAACCCAGTACCTTTTCTAGGGTAGGG GCGATCCCCCCAGGGCGTTTAAACTGCTAAAATTAAAGCAAGAAATTCCA TGACTTGATGATATCTATTTATTCTGTACTTGTTTAGCGACGACTGCTGT TCAAACCTCTTCACCAAAAGCTAAACCGTCAGAAGTCATCAGTGTCCCTC GACCCTTCACTGAAGGTACAACAGTGGATCCTGTATTCAGAACAGAAGAG ATCAACACAACATTTAGACCCAGGACTACTTCAACAAAAACAACCCTAGA AACATCAACAACATTTGAAATCGTACAAAAAACAGAAAGCAGCACAGTAT CAACTACACCCTCAACTACTTCAACAAAAACAACCCCACAAAAATCAACA AGAGAACCAACTACTACAAACATGAGAAACACGAGAAGCACTCTATTAAC AACATTATCGCCAATTACATCTACAGAAAGCCAATCAACGGAAACCAATT ATCAAGATAAAGGTATTTCAACGGAAAAATTTCAAACTCTAACCGTAAAA ACGACATCAACAACTAAAATGCAAACTTCGACTTCGACGGTTTCCATTGA TACTAGTAAACCAGTCAAACCAACTAAAGTTAAAACTCAACCAACAACCC GACCTTCGATTGAATCAACTGAGTGGTCTACATGGTCCTCTTGGAGTGAA AACAAAGGAAAACCTTGTGGCACATTGTTTAGAAGACGTCACAGAGTCTG CAAGAAACCATGTGAAGAAGTACAAGAGCAAGCAACGTTCAAACCTTGCA AAAAAGGTAAAACAGAAATTATTTATTCTCTGGATACACTCGAGTTAGTC AAGCAGAGGTAGAAGTAACCGTTTTAATAATGGGTATTATCTCCAGCTAT AATCTGCAGCTTTATTCAAAATTTGAATGAAGAAAATTTTAAATGGGGCA AAAAATCGATGAGAAGTGGTATGTATCACTTGGTATATTTGAAAGGCTTC GCTATTACATATCCCTGTTGAAAGTCAAGGTTCCAGATCAAGAATTTGAA TCTCTGGTATATGACGACTTTTCTTAAATTTCATTTGTCTTTCAGTTATC ACTCAAAAGTTCAAGATCATTGAGCGAATCGTTTATCAAGATGAAATATC CTCAAGCAAGAAGATCAATGTTTGGTCTTTTATCCAATGTAAAATGAAAT GTCAATTTGAGCCATCGTGTAATCAAGTCGCTATAAACAGATTAAAAGAC TCTTCATGGGATTGTTATTTTATGAGAACTAAAAATGGGAACTATGGTAT TGAAACATGGCGGAGAAAGAGAGCCTTCGATAATCCGGTGAAAGTGTTCA CTAAAGTATTCAGGTGACAAAGGAGAACTNGAAAGAGAGCCTTCGATAAA CCGGTGAAAGTGTTCACTAAAGTATTCAGGTGACAAAGGAGAACTAGAGA ACAGAGATCATTCCAATGAGCCTTTTGACAATGTACTTTAAGAAACCAAG ATGGGATTTTTTTAGCAATCGAAAGGATTTCATAGAAAAGTTGCGGTTGA CGGTTTGCAATCGTTGAGTTTAAGGGCTAAAGTTGAAACTCTCGGATGGA ACTACTACTGTCACTAGCAGTATTTCCGCATCATTCACAAAAACGCCATG TTCATAATGAAATCCATCGCAAGATTTTCGACAAATATGCTGTGTAAAAA AAAAACATGAAATTCAATTCTTTATTCTAAAAGTGGCGCTAATCTAACGG CTCCATTTTTTTCTTGCTTGAGAAAGTTGAAGATCTTTCCAAACTCAGTG ACTGGCAACTTCCAAC

Coding sequence (CDS) from alignment at sc0000349:149412..155627-

>TCONS_00020133 ID=TCONS_00020133|Name=TCONS_00020133|organism=Clytia hemisphaerica|type=CDS|length=4644bp|location=Sequence derived from alignment at sc0000349:149412..155627- (Clytia hemisphaerica)
TTATCACTCAAAAGTTCAAGATCATTGAGCGAATCGTTTATCAAGATGAA
ATATCCTCAAGCAAGAAGATCAATGTTTGGTCTTTTATCCAATGTAAAAT
GAAATGTCAATTTGAGCCATCGTGTAATCAAGTCGCTATAAACAGATTAA
AAGACTCTTCATGGGATTGTTATTTTATGAGAACTAAAAATGGGAACTAT
GGTATTGAAACATGGCGGAGAAAGAGAGCCTTCGATAATCCGGTGAAAGT
GTTCACTAAAGTATTCAGGTGACGACGACTGCTGTTCAAACCTCTTCACC
AAAAGCTAAACCGTCAGAAGTCATCAGTGTCCCTCGACCCTTCACTGAAG
GTACAACAGTGGATCCTGTATTCAGAACAGAAGAGATCAACACAACATTT
AGACCCAGGACTACTTCAACAAAAACAACCCTAGAAACATCAACAACATT
TGAAATCGTACAAAAAACAGAAAGCAGCACAGTATCAACTACACCCTCAA
CTACTTCAACAAAAACAACCCCACAAAAATCAACAAGAGAACCAACTACT
ACAAACATGAGAAACACGAGAAGCACTCTATTAACAACATTATCGCCAAT
TACATCTACAGAAAGCCAATCAACGGAAACCAATTATCAAGATAAAGGTA
TTTCAACGGAAAAATTTCAAACTCTAACCGTAAAAACGACATCAACAACT
AAAATGCAAACTTCGACTTCGACGGTTTCCATTGATACTAGTAAACCAGT
CAAACCAACTAAAGTTAAAACTCAACCAACAACCCGACCTTCGATTGAAT
CAACTGAGTGGTCTACATGGTCCTCTTGGAGTGAAAACAAAGGAAAACCT
TGTGGCACATTGTTTAGAAGACGTCACAGAGTCTGCAAGAAACCATGTGA
AGAAGTACAAGAGCAAGCAACGTTCAAACCTTGCAAAAAAGCAAATGGTA
TGGGCAACGAATGGACACCTTGGGGTCCTTGGGGACCTTTCGACGCCACT
TGTGGTCCACAAACAAGATTTCGATTGAGAAAATGTATCATTAAAATTCC
ATGGGACGAATGTATAGGAGATTCAATGTCGACACAAGTTATCAACAATA
TTCCATGCCATGCTAAAAATGGATTGTTTGATGTTAATACTTCTGGCTAT
TTTTACACAAGTTATCACTCAAAAGTTCAAGATCATTGAGCGAATCGTTT
ATCAAGATGAAATATCCTCAAGCAAGAAGATCAATGTTTGGTCTTTTATC
CAATGTAAAATGAAATGTCAATTTGAGCCATCGTGTAATCAAGTCGCTAT
AAACAGATTAAAAGACTCTTCATGGGATTGTTATTTTATGAGAACTAAAA
ATGGGAACTATGGTATTGAAACATGGCGGAGAAAGAGAGCCTTCGATAAT
CCGGTGAAAGTGTTCACTAAAGTATTCAGGTGACGACGACTGCTGTTCAA
ACCTCTTCACCAAAAGCTAAACCGTCAGAAGTCATCAGTGTCCCTCGACC
CTTCACTGAAGGTACAACAGTGGATCCTGTATTCAGAACAGAAGAGATCA
ACACAACATTTAGACCCAGGACTACTTCAACAAAAACAACCCTAGAAACA
TCAACAACATTTGAAATCGTACAAAAAACAGAAAGCAGCACAGTATCAAC
TACACCCTCAACTACTTCAACAAAAACAACCCCACAAAAATCAACAAGAG
AACCAACTACTACAAACATGAGAAACACGAGAAGCACTCTATTAACAACA
TTATCGCCAATTACATCTACAGAAAGCCAATCAACGGAAACCAATTATCA
AGATAAAGGTATTTCAACGGAAAAATTTCAAACTCTAACCGTAAAAACGA
CATCAACAACTAAAATGCAAACTTCGACTTCGACGGTTTCCATTGATACT
AGTAAACCAGTCAAACCAACTAAAGTTAAAACTCAACCAACAACCCGACC
TTCGATTGAATCAACTGAGTGGTCTACATGGTCCTCTTGGAGTGAAAACA
AAGGAAAACCTTGTGGCACATTGTTTAGAAGACGTCACAGAGTCTGCAAG
AAACCATGTGAAGAAGTACAAGAGCAAGCAACGTTCAAACCTTGCAAAAA
AGCAAATGGTATGGGCAACGAATGGACACCTTGGGGTCCTTGGGGACCTT
TCGACGCCACTTGTGGTCCACAAACAAGATTTCGATTGAGAAAATGTATC
ATTAAAATTCCATGGGACGAATGTATAGGAGATTCAATGTCGACACAAGT
TATCAACAATATTCCATGCCATGCTAAAAATGGATTGTTTGATGTTAATA
CTTCTGGCTATTTTTACACAAGTTATCACTCAAAAGTTCAAGATCATTGA
GCGAATCGTTTATCAAGATGAAATATCCTCAAGCAAGAAGATCAATGTTT
GGTCTTTTATCCAATGTAAAATGAAATGTCAATTTGAGCCATCGTGTAAT
CAAGTCGCTATAAACAGATTAAAAGACTCTTCATGGGATTGTTATTTTAT
GAGAACTAAAAATGGGAACTATGGTATTGAAACATGGCGGAGAAAGAGAG
CCTTCGATAATCCGGTGAAAGTGTTCACTAAAGTATTCAGGTGACGACGA
CTGCTGTTCAAACCTCTTCACCAAAAGCTAAACCGTCAGAAGTCATCAGT
GTCCCTCGACCCTTCACTGAAGGTACAACAGTGGATCCTGTATTCAGAAC
AGAAGAGATCAACACAACATTTAGACCCAGGACTACTTCAACAAAAACAA
CCCTAGAAACATCAACAACATTTGAAATCGTACAAAAAACAGAAAGCAGC
ACAGTATCAACTACACCCTCAACTACTTCAACAAAAACAACCCCACAAAA
ATCAACAAGAGAACCAACTACTACAAACATGAGAAACACGAGAAGCACTC
TATTAACAACATTATCGCCAATTACATCTACAGAAAGCCAATCAACGGAA
ACCAATTATCAAGATAAAGGTATTTCAACGGAAAAATTTCAAACTCTAAC
CGTAAAAACGACATCAACAACTAAAATGCAAACTTCGACTTCGACGGTTT
CCATTGATACTAGTAAACCAGTCAAACCAACTAAAGTTAAAACTCAACCA
ACAACCCGACCTTCGATTGAATCAACTGAGTGGTCTACATGGTCCTCTTG
GAGTGAAAACAAAGGAAAACCTTGTGGCACATTGTTTAGAAGACGTCACA
GAGTCTGCAAGAAACCATGTGAAGAAGTACAAGAGCAAGCAACGTTCAAA
CCTTGCAAAAAAGCAAATGGTATGGGCAACGAATGGACACCTTGGGGTCC
TTGGGGACCTTTCGACGCCACTTGTGGTCCACAAACAAGATTTCGATTGA
GAAAATGTATCATTAAAATTCCATGGGACGAATGTATAGGAGATTCAATG
TCGACACAAGTTATCAACAATATTCCATGCCATGCTAAAAATGGATTGTT
TGATGTTAATACTTCTGGCTATTTTTACACAAGTTATCACTCAAAAGTTC
AAGATCATTGAGCGAATCGTTTATCAAGATGAAATATCCTCAAGCAAGAA
GATCAATGTTTGGTCTTTTATCCAATGTAAAATGAAATGTCAATTTGAGC
CATCGTGTAATCAAGTCGCTATAAACAGATTAAAAGACTCTTCATGGGAT
TGTTATTTTATGAGAACTAAAAATGGGAACTATGGTATTGAAACATGGCG
GAGAAAGAGAGCCTTCGATAATCCGGTGAAAGTGTTCACTAAAGTATTCA
GGTGACGACGACTGCTGTTCAAACCTCTTCACCAAAAGCTAAACCGTCAG
AAGTCATCAGTGTCCCTCGACCCTTCACTGAAGGTACAACAGTGGATCCT
GTATTCAGAACAGAAGAGATCAACACAACATTTAGACCCAGGACTACTTC
AACAAAAACAACCCTAGAAACATCAACAACATTTGAAATCGTACAAAAAA
CAGAAAGCAGCACAGTATCAACTACACCCTCAACTACTTCAACAAAAACA
ACCCCACAAAAATCAACAAGAGAACCAACTACTACAAACATGAGAAACAC
GAGAAGCACTCTATTAACAACATTATCGCCAATTACATCTACAGAAAGCC
AATCAACGGAAACCAATTATCAAGATAAAGGTATTTCAACGGAAAAATTT
CAAACTCTAACCGTAAAAACGACATCAACAACTAAAATGCAAACTTCGAC
TTCGACGGTTTCCATTGATACTAGTAAACCAGTCAAACCAACTAAAGTTA
AAACTCAACCAACAACCCGACCTTCGATTGAATCAACTGAGTGGTCTACA
TGGTCCTCTTGGAGTGAAAACAAAGGAAAACCTTGTGGCACATTGTTTAG
AAGACGTCACAGAGTCTGCAAGAAACCATGTGAAGAAGTACAAGAGCAAG
CAACGTTCAAACCTTGCAAAAAAGCAAATGGTATGGGCAACGAATGGACA
CCTTGGGGTCCTTGGGGACCTTTCGACGCCACTTGTGGTCCACAAACAAG
ATTTCGATTGAGAAAATGTATCATTAAAATTCCATGGGACGAATGTATAG
GAGATTCAATGTCGACACAAGTTATCAACAATATTCCATGCCATGCTAAA
AATGGATTGTTTGATGTTAATACTTCTGGCTATTTTTACACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011309XLOC_011309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020133-exon-sc0000349-1575043694:155481..155627TCONS_00020133-exon-sc0000349-1575043694:155481..155627Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1575043694:151564..151731TCONS_00020133-exon-sc0000349-1575043694:151564..151731Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1575043694:150422..151090TCONS_00020133-exon-sc0000349-1575043694:150422..151090Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1575043694:149412..150132TCONS_00020133-exon-sc0000349-1575043694:149412..150132Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1510915933:155481..155627TCONS_00020133-exon-sc0000349-1510915933:155481..155627Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1510915933:151564..151731TCONS_00020133-exon-sc0000349-1510915933:151564..151731Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1510915933:150422..151090TCONS_00020133-exon-sc0000349-1510915933:150422..151090Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1510915933:149412..150132TCONS_00020133-exon-sc0000349-1510915933:149412..150132Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1491911889:155481..155627TCONS_00020133-exon-sc0000349-1491911889:155481..155627Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1491911889:151564..151731TCONS_00020133-exon-sc0000349-1491911889:151564..151731Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1491911889:150422..151090TCONS_00020133-exon-sc0000349-1491911889:150422..151090Clytia hemisphaericaexon
TCONS_00020133-exon-sc0000349-1491911889:149412..150132TCONS_00020133-exon-sc0000349-1491911889:149412..150132Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020133-proteinTCONS_00020133-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000349supercontigsc0000349:149412..155627 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.67544 1.59986 1.13934 1.05581 0.0639622 0 0.0304895 0.103813 0.0599527 0.0247537 0.0720796 0 1.77989 1.58858 0.0326506 0.101159 0.0712112 0 3.05037 4.01384 0.0458581 0 1.76357 1.51814 0.0509236 0 0.702823 0.16829 0.815978 1.46855
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020133 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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