XLOC_011339 (gene) - C. hemisphaerica

Overview
NameXLOC_011339
Unique NameXLOC_011339
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:484441..490864+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011339 ID=XLOC_011339|Name=XLOC_011339|organism=Clytia hemisphaerica|type=gene|length=6424bp|location=Sequence derived from alignment at sc0000350:484441..490864+ (Clytia hemisphaerica)
tcagagtttaaaatgaaataaaaataaaaaatatcaacaaagcAAATACA CTGACTGGAAACATCACCAGGATGATCAACAGTGGAGAAAGCCAGGTAAG GCAATCTGTCAATTGAAATTATATCACTCAGGCAAGTTACGGCCTGTGCA AAGAATTCGATAAATCGTGACGGCCGTGACGGCCAGTTGTTCCACCCCTT TTTATGGGGaaatttttcgttatttttacttttcatattaatacctttct aaaaagtcctgggccaaaaattctgtttcagccattttgggaaatttaaa gcaaaacactttttgctgacgtcagcaaaaattagaAATACTAATATCTC CTGGAATATTTATTGAAATGAGGTCAAATTTTGTGCAAAGGTAGGGttta taaatatctttcattcccaaaaaaatttttttcaaaagattgatgacgtc agcaaaaatcagcaattttcatttttcctaacaaaatgctgacgtcatca gttttttggaaaatttttttttggaaatagaaGATATTTATAAACTCTAC CTTcgtaccaaatttcagttcatttggATAAATATTTCAGGAGTTATtag caatttaaatttttgctgacgtcagcaaaaagtgtttttccttAATGGCT GAAACAGATttttggcccaggactttttggaaaggtatcaatatgatgAA CATAACTCAGTAAAAATTTCTTCCAGAAAAGGGGTGGAACAACTGGCCGT CACGAGTTTTATGATTTGTTGGATTTTTGTGTTGGCTGTCATGGAAATGA CGgatatttttgacgtcaaaacttAAAATGCCATAATTCCTGAAATTNCG TGTTGGTTGTCATGGAAATGACGGATATTTTTGACATCAAAACTTAAAAT GCCAATaattcctgaaatttttatccaAATGAGCTCAAACTTTGCACATA GGTAGTGTTCATGAATATCTTTGatttccaataaaaaaaatttcctataa attgatgacgtcagcattttttgaggaaaaaagaaaattgctgatttttg ctgacgtcatcacctttttgagaatttttttttttgaaacgagAGATATT TACAAACCCTACCTTCGTACCAAATTTGAGTTCATTTGGATAAATATTCC AATAGTTATTAGCagtttaaatttttgctgacgtcagcaaaaagtgtttt tccttaattttatcaaaatggctgaaacacaatttttggcccaggacttt ttgaAATGGCATTGATATGACGAgtgagaaaaaccaaaaatttttcccGA AAAGGGGGTGGAACAACTGGCCGTCACGCATTATTTGATTCGTTAATTTT TGCACAGGCCGTAACTTGCCTGAGCACTATTATTATTAGATCAATATTAT ACACATGACGTTGGATGATTTAGGATTTTCATTTATAACCATCGAAAATC CTTGCTATAGCATTACCTAGGATTTCAAAGATTTCAGCAccaaaaatttc taaatcaaCTCTATTAATGGTTTGTGACatttgttcaaattttggtAGTC TTTTCATAACTTGAACAATTCGATGATTATCGGCTCTTTTACTTTATTAT GAATGAAATTTGATCAAGGAAACTTGAAACTCATTGTTTCTCAACCCTGT ACTTTAGGGTAAAAGTTCAAGATTATGTCCTTTTTCAGGTGAATGAAAAC CACCACCAGCCAGGACACCAACCGAATCGAAATCTTCCAACGCAAAATAT ACCTATTAATCGTAagtgaaaaaaagatttataattcaatttttaattgg TAATCATTCCTTCACCTATTGTACCTCTACAACTTGAATAGATCGGTAAA TCCCATTGAACAAACTTGTCTTATAACAACAAAAATCCGTCCTGTCATTT TTAATGCCTTGTTCACAACTACAGGaatcgaatgtttacattcgaaaaTA CATTGAGTTTAAAACCTAGACGCACTCTTACGGGAATTTTTACAATCAGA TGGTctatttaatgtttttaaatttttaagtattttaacTTTCATATCTA TTTTTTTCCTAGCAGCAGAGAGAGGAAACTCATTCCATCAAAATGGTCCC GTGAGTATTATCAATAACAATACAACCTCAACACAACAATCATCTGCAAC CCCTTCCAGAACACCGGAAGCCACTTCTTCTCTCAAAAAACTCGGTCGTA AAAAGAAGCTGGAAAGTCCAGCACTGATGACACATCCTGTCATGGTGCCA TCATCTGCAAACAACAGCCACGTCATCGTCAAAAACCGCTTCAAACACAT CAAACCTACTTCAATCGTTGGTACCACTGTCACTGCAAATAGTGTAGAAC CGAAACCGAAGAATGCACTTCAAGCATTGGCAGAGTCATACGTAGACGAG CCACCTGCCAAACAAATGCGTACAGAATCTCCTTCAACAAGCACGCTACA AAGCTTACAacaaaaagtgaaatctcaACAAATTATCTTACAGCATGCTA CTGCTACCGCACAGCGTCAACGTCTCTTACAGCAAACCACACCAGCCGTC TCATTGACTATATGCCCGAACTGTCGTCGACCCGACACGTTGTCAGTAGA TAAAGGAACAGTAAAATGTAACAATTGCAATCGCTCTTACGTCTCTCTAA ACAACACAACAGTTAGTATGCTACCACAAACATTCTACTCACCAACTCCT CACTCGGTAGTCTCTCAACGGTTAGCAGCCACTAACTCATCTTCACCTTC TAAGAATTTGAGGGGTGCAAAGAAACCAACGGAAACGATCGATTTGATTT CAAGTGACgaagaagaagaggaagaagaatCAGATGAATCAACCAATAAG AACGACGAACATTCTTCTACTACACAAACAAGAGACAACACTACCGTTTC ATGTAATAATACCGAAGCAACAACTTCAACCAACTCGACAACAGTTAGAA AAACAGACCAGATGAGACTCAAGGGAGGAGAAATTCCCAACAATAATAAC ACTGGGAACGCCACATCCGCCGACAGATCAGCATCCACCCCTAGTCCTTC ACCCGCACAAAATACCACAAATAAGTATATTTTTAACAGTGAGAACGCTA TGTTTGGTGAACTTTACGGCAAAGCAGTGATGCCAATCAAAGTGACTGAT AACCGAATGTACTTATCTCTCGAATGTCATATTTACAGAGATAACGTTGC TACAACAGAGAAATATACACTCTCAGTAGGCTCCAATGATGTCAGTCAAG TTTATGTTTATTTTGGAAGGGTGCCATCTTTTGTCGCTATAGAAACAGCC AGGAAGTTTGCTACTGTCGCGTGTAAGAGGATTGGTAAAGAAGTATTGTG CCCAGGCTCCAGTATCCCAGAGAGACGTTATATTATTCTCGCTTTGAAAA ACGCTTTTAAAAATGACGCGGAAGCAGATTTGGAGCGACAGAATTTGATT GCTGCTGTAACACCGTGGGCTAGAGTTGAGTTGCTTTCTCATGCCGATGC TATACAGTTAATCAGTCAAGCTAAACTAGAAGTCAACCAAACGGAGGTTT GCTACGGCAACGCGGCCAAGTTGAACGGCCCGATCGAAACCATCCTAGTT TATCCGTCATCTTTGAAATCCGGGGGTATTCCCATCACCAACCTCGATGT CGAATGTTTAGATGAGGGAACCTATTTAAATGATATTATCATCGATTTCT ATTTGAAATATATTTGTGAGACACTAATGACTCCCGAACAACGCGAGAAA ACGTATATATTCAACTCGTATTTTTACAAACGTTTGACACAGAAGGCATC CAACAAAACGGATCCCGCTCAGATCCACGCTCAAGTGAAAAAATGGACAC GTAACGtagacatttttcaaaaagattacatcatcaTACCCATTAATGAG CATTGTCATTGGTACCTAGCCATTGTTTGTTTTCACGGCCGTCAACCGGT TCATTTGGAGAATGCGGAAAATGACGAAGAAGAAGACGATGATCAAATCG AAAATAGCTTTTTGATGCAAAAGACGACCGGTACCGAAGGGATGGAAGGA AGCGAGGACGAGGAAGCACCACAAATCGCTAACTCCCCAGATCCTTCCTC AGATGCTGACGCTGCAGTTTCAACGACAAATCAGAACACAGATCAATCAT CCGATCAATTATCGACGAATCCTCTCCCGGTTAACGCCTTAGCTACTCTA CCTTCTGAGGATCTACAAAACGCACCAATGCTTCCGCCTGCTGACGCCTC CACCGCAAACGGTGCGATAAACCCTGTCCTAACGCCCGCCAATGGTGTTG AACCGCCCAAAGTTGTGAAAGAAGTTCCAAAACAAGCTTATGATCTTGAG CCGTTCGAGCGTCCTTGTATTCTCATCTTTGATTCGTTAGTTGGAAGTGG GCACTCTCGTGTATTCACAAACCTCCGTAATTATCTGTCACAAGAATGGC TTAGCAGAAAGTCATCTTTAGAACCAAAAGTGTTCAATAAAGACACAATG AAGGGTTGTTATCCTAAGATCCCACGTCAAAACAATGACTGCGATTGTGG TGTGTTCCTTCTACAATACGCCGAGTTCTTTTTCTCCAAACCGATACGTA GTTTTCGTATGCCGGTCAATTTGCAGACTTGGTTTACCGTACAGTCGGTT ACACAAAAGAGAACTGACATTAAGACTCTGATACACAAACTAGCTGAAGA TTACCAACATTCAATAACTGAACTGAAAGCATCAAAACccaaaacaaaga agaaaactGTACCTTCTTCTTCATCCACTACTTAAACTGTATTTATATTG TTTCGAGTTGTTTACCCACATTTTTATCTTCATATANTTCCACTACTTAA ACTATATTTATATTGTTTCGAGTTGTTTATACACATTTTTATCTTCATAT ACTTTAGCTCAGgttagttttttattttcttatttgaaatgTTGACATTG ATGTGATGTGATGACCAATCAGCTTAACTGTAGGATGGCTATACTTTAAC ATTCCCAGGGAAAGATTCTTGGCGCATTTCTAGGTtctttccgttgtttt tttccGGGCATACCGGATTTTTTTGCTGCATACAAAACCGCAGACTAACC GCTTAACAAATTGAAGATACTTTTGGACCTACTTAGAGTGCGGGTCTTTT TCTGTTGGCAAAATGAAAATGGGGAAGGAGAAAGTTTAGCTATCCTAGGG TATATAAACCCTGGAGGTAGTTTGTCAAACCGGCTAACCAAATATCTGAc ctgtattttttttaaagtggtgaCCTTAAAGTTTACTAAGTGCTCAACAA TGTGGGTGTAAATGCACCGAGAGTGTTAGATCTATTTCTCCTAGGATACT GATGATGTTGCGCCGTTGGACGTTAAAGTTTTAACATTGCTATGGTTTGT TTACggttaccattttcaaaaaaaaatcacgtcAATGATGGTGGATAGGA TTTATAGAGGCCAGCGGTCTTACTTTCACACAATATGAAAGAACTTAATg gtggtcaaaaaatcttttttgaatgaCTTTTTCCGAATAAGAATCGTATT TAGATGCCTAAATTGTCAATAAATAGAGCTTCACGCCCGATTTAGTTTCG TGAATTTAGGTTTTGGTAGGtttatttttatctttaccTTTCTTTTGTCC TGTTTTACTTACTCTTTAACGGTTTATTAGCGCGGTCACCACGAGTCTAC CATTGTTATATccttttttaaacttgaaatgctaatgccCTTGTCCCAAT CTATGAATgataaaaacacccccttctcacagacccggtaggattttttt agccagtggggaaaaaataacagactgaaactcgatggggatttatATTC CCAATTTTTTATGACCAGGGATTTGaattctttgttttcaagtcaatttt caagttttcaagttgttttcagtggtttatTTAAcaattttcagcgggga caaaaattggagtataattttccaccggggacaatcttttggccaatttt tccagtgtgaagggttcccagtgggtctgtaagAAGTAGCAgtataaaaa gttttgaataatAATACATACGTTTTGTCTTTGCTTTGACATTGAATCAA GTAATATGCCTTTTCTAAAAGTACTAATAATGTTTTATTTTCCTAGGCCC GGGCTGATCCCACTATATATCGGTGTGCCGGGTAAATCAATAGGAGACCT TAGATAGGGTCCAAAGAAAGGTTGCTGCCAAACTTTGCATTTCCGTTATT CAACGGTACTAGCATTTTTCGTAGTAGAGTGGTGCCTTGCCTTCTAGGCT ACTATTtgacttgttttttttctcttgtttCCAAGGATTTTAGAAAgaag atttatttttattgattagTATATTACTTGAGAGAgttttttatcgaaaa agaagtTTCTTTACATTACCTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020192TCONS_00020192Clytia hemisphaericatranscript
TCONS_00020193TCONS_00020193Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020193-proteinTCONS_00020193-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:484441..490864 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.8 7.14 5.05 4.06 14.66 11.98 10.31 11.75 4.22 7.91 5.25 2.86 4.07 5.22 3.82 5.65 5.8 5.44 2.37 2.72 4.85 4.52 11.09 11.77 9.33 10.68 5.4 4.31 13.39 14.86