XLOC_011349 (gene) - C. hemisphaerica

Overview
NameXLOC_011349
Unique NameXLOC_011349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:220910..225639-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011349 ID=XLOC_011349|Name=XLOC_011349|organism=Clytia hemisphaerica|type=gene|length=4730bp|location=Sequence derived from alignment at sc0000350:220910..225639- (Clytia hemisphaerica)
TTTTCAGTATACAAAGAAAATAAAAACAAAAAGATAAAATGAGTAAAAAT AATGGAATGGAACTTGACTTGAGTGTGAATTGGTGATTGCTTGGATGTAT GGACAATCGCTTGGCTGTAGAGGTATCAGAATTCATTTTCTACCTTCAAA TCAGTTCAAATCTATAATCTGTTAAAGTTTGAAGTTTTGGCACTATTAAT ATGAATAGCTTTTACATCACAAAGATAAAAGAATTGAATGATTGTCATAC ATTGATGCTGCAAACGATTAAAAATCTGACTGTTATTAGTGTATTATAAT TCTTTTATATCGTTGTCATGTAGAGACAAAAGGTTATTGACACTACGTTA TGTTATCATTTCGTGCGTGTATGTTTTGTGATGACACAAACTGTGTGACA AATCGATTTATTATTTTAGTGTTGCAGTATAAGACCTTCTTACTTTCTAT TTCTCGAATTTTTCTTTCATAAACAAAAAACTTATGAATGGCAAAATTTA ATCTACGCGGGGATACATAATGGTTCGCGAAAATTTAGAAACCCGCAAGA ATAGTTGAAACTTATATTTCTTTTCCCCAGGATTCGCCACGCATTCAAAT GAAGGATGCCAGCCAATGTCTGTGGCCATGATGTCGACAATTTATTGACA GGTTTGTTTATATCGTAAACTGTTAAAATAAAAAAAATTTAATCGGAAGT CCACGTGTGGGACAGTAATTTTAACAAAGATATCATTGGCTTTTCAAAAC TTTATAAGTGTTATCTTCTTTTAATCTTTACTTGGTCCAAAGCAATTTTG AAATAAATTGTAACCCTAGATACTATAAGACAGGCGTCACATCTGAACTC TTTTACCAGTGGGATTGACAAGGTTAGTCATTCATCCATCCATTCATTCT TTCGACTGATTTTCCAGGAGCCTCGTTCGAAGAATTAACAAACCAAAACA TTTCTCCTCAAGAAGAAAGTGAGCCTAATGGAAATGAAGAGCTCCCTGAA GGAGAAAGAGATGGTGGAGATACGTTGTTAGAAGATGACATCATCAAAGC TGCTTTATGTGCTTTACAAACACCCTCCTCCACACCCGGTATGAAAATAA CAATTTCATTCCCATTTTTCGTTCATGAGAATGATAGGATTTCTCCAAAC AGTAGAATATTATTTGTGTGGTGGTGGTGGTTTTAAAGTAACATCAAATC TGTTCCATTCCCTCAGGAAGTAGCCTGTTAGTTTAATCAACGTCACCCTC CGCCGCAGTGCAATAACTTTCGAAAAACGCTTCAAAGTGTAACAGACCAT AAAACAAATAACAAATTTGGGAAGGTACTGGTTACTCATAGTATGTACTA TCGGCGCCGAATTATATTGGCACTTTTGGGTATTTTATCGTTTTTCAGAA TTTAAAGATCGGGCGAGAATTGCAAGTTCAGTACTTCCACTTTGTGTCTT TGGATTTTTCGATTTGGGAGGGGTTAAGTGGCTTCAAGGCTATATTCTCA ACCTTATTGGAACATTTTTGAACTTATTAGATCCTGAGATCCTAAGGTCC TAAGGCTTAAGTCTCATGTTAAAACTCTACTTTCCAACCGTACTTTAAAG CACTTAAAAATCACCTGCGATTTTCAAATTCGAGGGAATTCCCCTTTCGT GCCAAATATTACTGTGGGGATTGCAGTGATAATTTGTGTTTACTTTCTCA CACACTTAGATAGCTCTCCTTCAAGGGGTGAGGATCTAAACGCCAATAAA GAAGAAAGTGAAAGTGATTACGTCATTGAAGTGGATGATCTCCCATCAAG TGAGGGGACATTGACGGCCAATGAAGATTCAGATAACGAACTCTCGACCA ATCAGAATATAGATGATGAACTATCGACCAATCAGAGTACAGTAAATATT GAATTACAATTTGACGATGAAGAAGTACCTCTACACAAAGACACTTTTCA TGAAGAGGGTTCTCTTAGCAAGATGGAAAATTTTGTCACTTCTATCCCTT TAGGTAAATTCCTTAATGTTAATATGGTCAAAAGTATTGGAGCTTCTTTA TATACACCACTTATCTACTGATGGAATTTAAATTTAAATTAAAGCTTCTC CCACTTTCTTATAGATTTCAGGGCTGACTTTTCTGATTCTTTTGTTTGGA ATCAATAATTCAACCTTCTTCAAAAATCTTCGTTTTTTTAGTGAAGCCTC CTCCAATGATAATTCCACCAACACAACCTGTATCACTTCCACAGAATGCA CGGACGCATCCAATGCAAATACGCCCTCAAACCGCCTTTCAGCGAAATCA TAACGCCACACATCCACCACAACGCATCATGTATATTCAATACATTCCTG TTGCTGCGCAACCACCTCAAATGATGACGCAATTCATGCAACCGCCCTCG TTTGTTCCAAGGCCTCAAATAGCACCTGTTTCTATAACACCAGCAACACG CCCTGTCGTAAATGCAACGCCCTCGATCAACCCTATAACTACAACGAAGC CGAAACCCACAGAAAATAAGTCTGACGAAGATGATGATGATGATGTTCCA CTTGCCAAGATTTCAAACGTGACGTCACTTAAAATGTCCACCAACCTCAA CGGAACTTTACATTCAACAGAAGTGGAACGGTCGCACATTTGCGACGTTT GCGGCGCCGGTTTCCAGTGGAGAAGCCATTTAAGGCGCCACCAGAAAACA CACACGAATGAAAAATTCGAATGTGATATTTGTCATGCGGGGTTTGGTCA ACAGAGCTATTTCAACGCCCATTATAAATCGCATTTCAACGATAAACCTT ACAAATGCGAAGCTTGTGGTAAACGGTTTGTACAAAGCACACATCTCAAA ATTCATCTCATGATTCACACCGGAGAAAAACCGTACCAATGTCAATATTG TAAGGCCCGGTTTACACAGCATGGTAATCTCAAAAGACACATTCGGGTTC ATACCGGTGAGCGACCTTACCCTTGTACCGAATGTCCGTCGTCTTTTACA CATTCCAGTGATCTGACGCGACACATTCGAATTCATACTGGTGAAAAACC GTACAAATGTGCTCATTGCAGTTCGGCCTTTGCTACAAATGGGAATTTGA AGTCACATCTTAAAATACACACAAATGCTAATGTCAACCCCTTTAAATGT TCTTTGTGTCACTCAGCTTTCAATCTTGAAAGTTACCTGAAACTTCACAT GCGTACGCATATCCACGAGCGGCCATTTGTGTGCGCTTGCGGTGAAACTT TTGACCAAGGTTTGAACTTTAATTTTCATTTGAAGTTGAGAGTTTCACCG TTTTGTTCGCAGGTCACTTGATGAGTTTTCACTGATATTCAGTTGTAGGA TCTTATATATATTAGCCTTACACACTTTTTATTTTCATTATTGTAATGCC TAATGCTACAGTATTTTCTGATAAGATGCGATTATGGCTCAAAAACCATT ATAAGCAAAGCTTTCACATAGGAATCAATGACGTCATTAAGATTTCAATG AAAGAAGGATGTTATGATGCACAAGGTCATCTTGGTTTCTTATTCACTTT TTGTCAAAAAGACTGAATAAAAAGTCCTCTGGTGTTTTTCGAGTCAGATA CGCATCCTTATAACAAAAGCTATTTTAGAGATGTGCGCGGCTTAACCTTT CCTTGATCGAACTTCTTTCAACATTTTGTGTTTTAATGTTCCACCCTTTA ATATTTGGTATTCATTACCAGCTCTTTTGTCTCGTGGGAAATGATCCTTT TTGGTGAATGAAAAACAGGGTCTGAAACACACTTTCCCTATTCGTGATTT TATTACAATTTTTTTGTGTAGATGATATATCCTCCCTTTTTATTTTGGTT TGATTTTATATAGCATACAGATACCATATTTTATAGATTTTTATATAAAT TATTACATGTGATTTTTGCTGACTCGAATTAGCATAGAGAATCTAATTTG TTCGAATAACGCCGGGAGATATTCGAATTATAGAAAGCATTTTCCGTTTC TCCTTGACGAAGAATAATAGAAAGATTTGAATTAAAGAGAGTCCACTTTT AATGGCTGCCACAAATATTATATCAAGTCAGAGATTATTTTTTTGTTTAA TTTATAGAAACTATATCACAATTTATATCGACATAATGAACTCTAGGAAA AGATGTTTTACAATTTTTTATGTTTTCGTATCAGGATGTTGAAATAGTTG TAAATACCAATCCTGGAGTTGGGTTGGCTTGATTTCGGGTGAATCGCTTC CAATACNGCACAAGGTCATCTTGGTTTCTTATTCACTTTTTGTCAAAAAG ACTGAATAAAAAGTCCTCTGGTGTTTTTCGAGTCAGATACGCATCCTTAT AACAAAAGCTATTTTAGAGATGTGCGCGGCTTAACCTTTCCTTGATCGAA CTTCTTTCAACATTTTGTGTTTTAATGTTCCACCCTTTAATATTTGGTAT TCATTACCAGCTCTTTTGTCTCGTGGGAAATGATTCCTTTTGCAAAGATG AATGAAAAACAGGGTCTGAAACACACTTTCCCTATTCCTGATTTTATTAC CATTTTTTTGTGTAGATGATATATCCTCCCTTTTTATTTTGGTTTGATTT TATATAGCATACAGATACCATATTTTATAGATTTTTATATAAATTATTAC ATGTGATTTTTGCTGACTCGAATTAGCATAGAGAATCTAATTTGTTCGAA TAACGCCGGGAGATATTCGAATTATAGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020218TCONS_00020218Clytia hemisphaericatranscript
TCONS_00020217TCONS_00020217Clytia hemisphaericatranscript
TCONS_00020216TCONS_00020216Clytia hemisphaericatranscript
TCONS_00020215TCONS_00020215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020216-proteinTCONS_00020216-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:220910..225639 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.67 6.32 1.98 1.22 49.7 38.64 16.32 16.45 7.56 9.26 8.7 5.96 6.36 6.26 7.17 8.76 11.29 10.18 6.02 5.97 5.42 5.54 9.61 9.82 5.95 7.01 5.91 6.38 11.41 11.22