XLOC_011471 (gene) - C. hemisphaerica

Overview
NameXLOC_011471
Unique NameXLOC_011471
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000356:286153..289753+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011471 ID=XLOC_011471|Name=XLOC_011471|organism=Clytia hemisphaerica|type=gene|length=3601bp|location=Sequence derived from alignment at sc0000356:286153..289753+ (Clytia hemisphaerica)
gatttacaTTTAGGTAAGATTAAAACAATAAACACCATGAATTGCATGGA
TTGGCTTGCAATTTCGATATTGCTTTGTCAATGTGTTTCTTTGACAACAT
CATATCGATTCATTGCAATGAACCAAAGACGATCACCACAATGTGAGAAA
GTAGAATCTCTTACATGTTTAACCAAAGTTGGAGAAGGTTATAACTCAAC
CATGTTTCCTAACCACCTTGGACACTCTACACAGAAAGAAGCACTAGCAG
AAATGCGTGATTTTGAAGTTCTCATCGAATCGGGCTGCTCCAAATATTTA
AGCACATTTTTGTGCTCTCTATACTTCCCAATCTGTACACCTGGATTAAT
GACAACAGTGAAACCTTGTCGTAACTTGTGTGAGAAATCGAAAAAAGGAT
GTGCTCATATTGTCCAAAAGTACGGATACGAATGGAAATTCAACTGCACA
CAATTCCCAGACCCGGCCACAAGTGGAGAGATTTGTGTTGGTGCAACAAC
AGTTGATGCTAATCAAGTAGAGGATAAAAGCGTAgccaagaaagaaaaga
aaaccaaGAAGAAGGGTAAGAAAGAATTACAAATAGTTTTGTCTCAAAGA
GTATTAACTTCAATATCGTCAGAGCTACATTTTAAATTAAGCTTTcttct
cagctcccagtaaaaAGATTAAAGATAAGCCGTTAAGATATCCTTCCATA
GGTGGGAACCTAATGAGATAAAAAAGTATGGAAACGTCTACAGATGTATG
ATTGTTTGATTACGCACGCTTGACGTGTTTTTCGAATTCATCAtataaat
attcttaactttttgggaaaaatcatcctgaaatattcttacggtattct
taggttttgaTCCAAACCCAGCCAAAATCTAGTTTGTAATAGATACctca
agcaaaaattttgtaTCTTTGTGGAACCTTTAATATCGGCCAAGTTCAtc
ataaatgttcttataaaataaattcttattaaaaaagcgtgtaatactTT
TTGTCCTTCTTTTTTAGCTCGAATGGCTGGTGGTTCTGAAAATGACATTC
TTGATATAACTTGTCCCCGAAACAAATACATTTTCGTTCGAAAAGTCATG
CATTTTGGTGACTCAACGTGCTGTAAGGTTGCATCCAAAGCTGTCTTGAC
CGCTTTATGTAATGGTAAAAGGCATTGTAAATTCACTGTCGCCCCTGAGA
GTCTTGGAGGACATTGTGAGAAAGGCAGAACAGGACAAATCATGGTCCGT
TATCGATGTACAAGTCATAAAGATAAGAACTGCTCACAACAAAATGCCAT
CCCacgaaaatcacgaaaaaataCCAGTTAGATAAAGGAATAGCACTAAT
CGGTTAATTCGAAGAAAACTTGTGTGTCCTTTTCTTGTGTAAATAGTATA
TCAATAGTCTGAGAAGTTTTTGCCGTGTTTTTTTGGCAATTTAACAGGCC
TAGACCTTTCTAAACTACCAGTAAGTCTAGCGCAACAGAGAGCACCGTTT
AAGTTTTCTCAGGCTAATACAAGCATTAAGACAAATCTTGGTAGGGTTAG
AAACGCCCGATTTCCGAAACTCGAACCTCTGATGATTCTACAGAGACTTG
ATTGTGTAGATAACCTTCAAAATTTAGTATAGAGGTACAAACcttggcaa
aaattttgttttaaaattgccATTTTTTAAAGTGTGGAATTTCTTAAAGT
TTTATTACTTTGATACAGTGTTCCGCGACAAGGTATACTCAAAAACTAAC
TTAAATTTTAGATTAGCTGAAGGCGCATTCAACGTTCTACGGTGAAAATT
TCATTGCGAAAAAAGTCtttgttttagagatatgaagcTTTAAGCACACT
AAGTTGGAGATGAAAATAGTCGAGATTGTAaactttcaaagcaaaaaaaa
actaattgacTTTTGATTGACAGCTCTTTTTTATGTCATTTTGATGAAAC
CTTACTTTTTCAGTATACGTTTTTCCGGAACACACtatagttttttattt
gtttttaatatATAACTTTGATCGtcattttgatacattttttacagata
ttttttaatatatttgaTCTATTCAAAGAATTGAAGTCTTAAGTTAGAGA
CCTCAGTTTACTCCCTAAGGCTCGCCAAAGTAAGGGAAGTAAAGTTATTC
TTTTTGCCGCCCCTCTTTAATTATGCATTTGGGTGATATAGGAATGATAG
ACGTATTTTCCTGTTAGATTCAATCTGTTAGTTTTACCTGATGATTATGT
TGCTAATTAGATGCTTTTGATATTGCATCTTAATTAGTCCCAATTAATCT
GTggaattttgattgaattacAATCTGAAACTCTCATAGAAAAAAAGGCT
TGTCCGCTGTtgcactttttttaatttcttgcaTAAAAGTAAGACTTAGC
CAAAAAAATCGAACTATTTTCTGCTATACTGCTGGTGATATTAGCTAGAT
TACAAATACACAACCCTTTCTCAAGATTTCTAAGTCAATCAAAATACGTG
CACAGAAAACTGTGCTAGGTTTCTCCTgcaatcggcgccgaaatatattg
gcacttttgggtattttaacgtttttcagaatttaaagatcgggcgagaa
ttgcagtttcagtacttccactttgtttcattggatttttcgatttggga
ggggttactAGTAAGTGGATTCCAGGCTATACAGGCTATCTGGTATTTTC
AGCCtcattggaacatttttgagcttttagatcctgagatcttaaggtcc
taagttttaagtctcatgttaaaactcaaagtTAAAACTATACTTTCTAA
CCGTACTTGTAAGAATGTAAGAATGgtcgaataattttttttataagaac
atcaaaaattttctcagctttttgacttttaagcctaacaatgttcttaa
ccctttaagtgccacggtcatttttttctaagttgcgcggacctgcctga
atgatggAAAAGTGCCCAGTAGTAAAACTCCAAACTAATTCGCTGGAAGA
Cggaatcaagtaaagcagggccaaatttggaggttcttggatgactcgtt
gaccaaaaatggtcaaaaaacggtcaaaatcttaaaaaagtggatttttg
tcaaatttttgtattttttgactttttggcttaaaatctcgctagaaaaa
ctaatttttgatttttttgcttgaccatgaagcacaatccaattcctacg
agttagacaaaaaatgacgatttctaactcaaactgggagGGCTTcaccc
tcctacatagcccgggtctgatatatacgacattggcacctAAAAGggtt
aacttgttcttaatattttggtcatggGAGccttcttatatagtttgttc
ttattaaaaaaacatacaATGCAAGTCCGAAAATGGTCATAAGGTTTTTT
TTGGattaaattatttcatttttctgttgattatcaaaattataaaattt
cctAGTTCTACTGTTAGATATTaacaaaagtgttttctttttaaaaagtt
tagcataaaaacgaaataaaaagCCCTGAAATGTGTTTTCAATATGAGTC
AATGAATCAATTTTAGAGAGTGCTTTTAGTATATTATTGTCAATAGTTAG
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020418TCONS_00020418Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
sFRP (secreted Frizzled related protein)TCONS_00020418-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000356supercontigsc0000356:286153..289753 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.05	0.2	0.13	260.56	221.46	282.42	286.15	218.51	188.65	148.65	164.68	2.7	1.71	4.05	2.6	2.24	1.89	2.12	1.03	2.21	1.56	2.58	3.09	3.57	6.46	18.01	8.02	3.92	2.98