XLOC_011503 (gene) - C. hemisphaerica

Overview
NameXLOC_011503
Unique NameXLOC_011503
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000357:9862..15201+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011503 ID=XLOC_011503|Name=XLOC_011503|organism=Clytia hemisphaerica|type=gene|length=5340bp|location=Sequence derived from alignment at sc0000357:9862..15201+ (Clytia hemisphaerica)
tttattttctagaaAAGATTATTTAATAATTGAGATAAATGGATATTATA GAGAAAGCTGGAAAAATCTAAATGTGAATTATGAGGTGTGTTGCTACAAA ACAACAATTCTTAAGGCAAATGCTGTGAGCATCATTATCAACCAATAGTC ACCATGGTAGATGTGAGGGGTGTTGGTCCCTATTTTCTTCAACAAACACT TGGAAAAGGGCAAACTGGTGAGTCTTTATCCATTTTATAACTTGTCATAT ATTATGTACCAGTCaactttaaaaagaaagaaggtttttctttattatag aagtatatttcgcaggtctattgacttCTATGAAACAATCTCCTTTTAAG TTACAGTTTATCGATAACCGTCTTTTTACATTATTCAGGTTGTAGCAAGG TTGCTTTTACGAAAAGTTGTATCGATTGAGTATGTTATTATCAGATACTG AGAATTCTTTTACTTACTTTTTAGGTGTTGTTAGATTAGGAATTCACagc caaacaaagaaaaaggttGCTGTCAAGATtgttgataaaaacaaaatccA ACCAAATGTGCTTGCAAAGGTAAGAGCAAAAGATGTTGCAAAAAAAACAA GGCAGATTTTAATATTACTTTAGTTAAATCCTAAATTCAATAAGTCTTAC CAATGCAAAAACTTTTTGTAGTGAGCATAGCAGCGCTTTTCTCTTTTCAT TATGAATAAGAAGTTCAGAataaaacagaaaatgttttttaggcCATGTA TTAGAATGGCAGGGTAGCGTCTGTTAATGGCAGAAAAGAGCACTTTGTAG TGcttttctactaaaaagtcaGTTTTTACCTAAATATGATCGATTTCAGG AGGAGCAGCATCCAGTTATTGGATgccatcaaatttttttattttatatc ttCTTCTTGTAGGTTGAAAGAGAAATAACAATAATGAAGCTGATAGAACA TCACAATGTCCTCCAGCTCTATGATGTTTATGAAAGTCGCAAAAATCTGT AAGACTCCTCAGTTAGtttttctcttcaaaaatcTTCCTGCCTTGCAGAA GTTTAAAAAGGGTGGTTTCTGTTTCAAAATCTAATTTAATTTGAAGAGTC TAGCTTATTGTGCAGAActctattttgatttttaaaaaagaatatttGTA CTGCTTTGTATGGAGTAATAAGAAAAGTGTTTGCTTCATTCTTTACTATA CAGGTTTTTGGTGCTGGAATATGTTGGAGGTGGTGAACTCTTCGATTATT TGGTTTCAAAAGGGCGCCTTCACATTCTGGAGGTAAAATAGATCTCTTTT GAAGTTTGATAATTCTCCTCCACAATCTACTATAAAGTACATAAAAACTT TTGAACTTGATACATCACTAAATAAATCTGCACCatttgatcaaaagtta tgctgaaattaaaataaaagaaactcACTTTCACATTTTTCATTCACTTT TAGGCCAAAAAATTCTTTAGGCAAATAGTATCAGCCATACACTACTGTCA TCATCATTTAGTCTGGTAAGAATCGGTCtgaatttgtttctttttatctA ATCTTATAATTTCATTAGAGAAAGTAACacaatttttcatttaacttTAA ACTTTTCTGAAAATGAGTGAAATGTCAGAGAATGTTTCCATATTCTTTTA ACCtgaactttctttttcttccagTCACAGAGATTTGAAGCCAGAAAATC TGCTacttgatgaaaagaaaaatatcaaaatagctGACTTTGGAATGGCT TCAGTGCAGGTTTGTGATctttttttgaatgaatatttgGAGGTTAGATA TCCTTCAATCATCAAAATTGTGTTTACTCAGCCCACTATTGGCTATGATA CCATGGGAATAAATTATCGTGGGAACAAATTTTCACAGAACAAATTTTCA CAGAACAAATTTTCACAGAACAAATTTTCACAGAAcaaattttcgcaaaa tttcattttgcggtttttcgtcaaatccacaaaatttaattccgcgaaac aagaatattctcatgataaaaaaaacacctataaaatttgtttttttaag ggCAAATAGgacattttaaacaaaatatcctctcaactgcgaaattaaat tccgcgaaacttccaaattttgagctgtgaaccgcaaaattaaaatccgc taaaatttctttccaCAAAGATTTTCACTTAAGGTATGTCATTGTGAAAT TACATGGTTTGTGCCATTTTTCAAGCAGTTGCTTTGTAATATAGAAACAT TGTTGTATTCTCTTttcgaaagtttaaaaagagaaaaatctcAATGAACA AAACCATAGACctcaagaaaaaaattccttCAATTCTTCCCTCGACATAT ATCTGATTTATCAATAACAATAGACTTTTGACAtgttttaacaaaagaaa tgacaagattgttggacctacctccgggtaccccggtggaggtcctataa attaacccatgtccgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttcgttcgttcgtccgtctgttaccagctttgctcaggatt ggctcattagttttttttgatttttggcacaatgatgcaaaatgacaatg cccagATTGTGACGGagccgatttttgagaaaaaatttatttgggcaaat ttgggccaaaaactacctaaaaatagggttttttggactttgtgcaaaat cctgtcattacttttttctgaagaatggctgaagtggtttttcccagaaa atttttattcgccttaaaaaacggattttcgtattttggggaaattccct ttaaccaaataagaaaatatacctcattatttttttctgaatttttgcac aatgatgcaaaatggcaatgcctaaaatgtgacggagcccgattttcgaa aaaaaaaaatttgggcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNccattttacattattcaacacacaagctttattt ttccattctgaatttttgtacaattattgtcacttttttcttattttcat ctgatgttaatcattaggtaggtttCATGGcttccattcagcatgttgct tgttttgaGTCTTACTTTTTATCTACTTTATTTTCTAGATGGAAAATGAC ATGTTAGAGACCTCCTGTGGGTATGGATCTGatttttaattacattcatt gtGTATGGTATAATCTGGTATAATTTCTATTATCTTTGTTCTCCCTGTCA CTAGCTTGGTCGGAATAATTTTTCTGAATCGGGAATAAACTTCCTATATC CTAAACTAGAAGGATGTTAACCTcagattttttggaatttcGAACGGGAA GTTTTAACCCTGATTTGGAAGTCGCATACTAAAATTAAGGTGAAACTTAG CCTAATCAGGAAAATATTCCCATTTGGGAACCATAGTTATGCCTGTTTCG GGAAGCTCTTGCCTATTTGGGAGGAATCTTCCTCCTTTGGGATAATGGCA GGGACTGCTTGTGACTTCTATGTACTGAATTTTTATgcttttgttttagt tctccTCACTATGCCTGTCCAGAAGTTGTACGGGTAAGTTCATATTAATA TTTACAATTACTAGCCTTTTTCAGGTGTTGTTAAAGACACCCTTTACTCT CCCTAGtgtttttttgtaatcaaaTCAGATTGGAATGGTatttttggaag aaagttttctCTGCTTTGTAATTAAAGTGGGTTTTataatctttcatatt tttctttcatattcaTTTGGTTGGgccatgatgatgatgataatagCATT TTAATTTGTTATTTCTAAGGGTGTACCGTATGATGGTNCTTATATATAAG AAAGCTTTTAAAATATATgagcagaggaatgtaaagagatggaaaaacag cttcttgaaaataattgaaaacggctcgtcatataccaggtctcttgccc ttaagggagtttatgtcgagtaaataggtttcttttgttgtcgctataaa aaatctgcataattagcgtgtNACCGTATGATGGTCGTAAAGCAGATACT TGGAGTTGTGGTGTAATCCTTTATGCTTTAATAGTGGTAAGAAAAGGTTC CATATTATAAGAAAAGTGTTTTTCCACATAAGGatgatgaaataattttt tatgtatttttttcgaatttgcACAAGTGccaaaagcttttttagtgata ggttaattttgtttatatattCATTTTAGGGTTGTTTGCCGTTTGATGAT GACAATTTAAGGATTTTACTTGAAAAGGTATTATAAATTCACTGATTATT TGAGTATATTACCACGAGGTTCCAAGGTTGCTAAGTTGTATTTTATAAAT AATCAtgagaaattaagaaaaatttgaacaaattgttATATTAAAGGAAA CTAAATTCGCTATTTTTTGAGCGTATGAAAATTGCTTATTTTCTGAAGCA ACAATTAGTTCTGAAAAATTGCCCTCCTTAATAACATATTTGATCGGTTT AAATAGTTCATGCTTTTTGATTTACTCTAGGTCAAAAAAGGAACGTTTAC AATACCAGCTTTTGTACCACCCGACTGTGTGGACCTTCTTCATAAAATGA TCAAAGTCAATCCTGAACAAAGATTCACTGTAAGTTAACCTGCGtaatgt ttttccatttttggttccatttccctttttttatgaataaaactaaaata aattaatttgaaattttagcatATAAGATACCATCGGCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020460TCONS_00020460Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020460-proteinTCONS_00020460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:9862..15201 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.52 4.36 17.12 18.52 33.77 27.4 25.88 25.38 21.76 23.22 21.11 18.69 22.85 21.25 20.05 24.5 21.51 20.71 14.27 18.81 18.42 20.55 16.8 14.31 34.14 29.26 18 13.55 27.07 24.47