XLOC_011578 (gene) - C. hemisphaerica

Overview
NameXLOC_011578
Unique NameXLOC_011578
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000359:26611..31572-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011578 ID=XLOC_011578|Name=XLOC_011578|organism=Clytia hemisphaerica|type=gene|length=4962bp|location=Sequence derived from alignment at sc0000359:26611..31572- (Clytia hemisphaerica)
ATGTAGCCATTGTTTGTAGATTAACATAATTATGTTTATAGATTTCTCAA AATTGCAAAAAAATTTCTCTCGACATATCATTTCAACTGACAGCTTTTAA ACAGAAGACAGAGGTAATTAATATTTTCAAACTAGGATGATTTATGACAA TCTTTTTGGATTCATTTCACTTCTAAAACTAAATTATAAGCTATAGTAGA TTTCAAAGGGACTCTTTCAACCTCTTTTAGATTTCTTATACAGCATCTCG AAATGGGTGAGTTAACAAAATAAATCACTCTTAGGCCACTTTTTCAAAAC TCTCGCATTTTTTGACATCTATTCTTTGAGCCACTTTGACACTCTGGTCT GTAAAATACCATATACATAAGAAAATCACATTGTGATTTTTCATATGTTT ATGAAAATACCAGAGGAATGTAAAGAGATGGAAAAACAGCTTTTCTGATT ACTCAAAGTTCAACGATCACTTCTATTGAAAATTCTATTGTAAAAACTTT GATTAGGTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNAAAAGACGGCTCGCCATACAAATCGGACGGTTTCTACATGATTTGAC GATAAAAATGAAAATTTGTTTTTCCTTTTTTGCCGATTACTAGTTCAGTT TTTAAGAATAAGGAGCAATATTTTTACTAATGTATAGCAAAAGAAAATCT TAACGCAATGATATTAAATTGGTTCTTGTAAAACTGTCAGAAGTCGAGTA AAGTCAATATGAAGTTATAATTTTCTCGCGCTCTAGCTTTCCATACAATG ATGCGGTCATAATGCGGTTATATCAATAGAATCACTAGGAAATTCTGAGC AAGAAGATATAGGTACCTTTTCGTATAGGAGAGGTGTACCCAAAATATAA GCCCTAAAAGTTTGCACATAATCAGNNNNNNNNNNNNNNTAATTATGCAG ATTTTTTATAGCGACAACAAAAGAAACCTATTTACTCGACATAAACTCCC TTAAGGGCAAGAGACCTGGTATATGACGAGCCGTTTTTCCATTGTTTTCA AGAAGCTGTTTTTCCATCTCTTTACATTCCTCTGAAAATACTAACAAAAC AGGAGGGGCCGACCATATTATTTTTAGCTTTCATTTTTTTTAGATACTTT GGTGATCGTTCCCAAACAAAATGTCAGATAAAACCTCAGGTAAGCTACAT CTTTAAATAAGAAACTAACCAAATGAAAAACGTTCAGTGTCCGTTCGGAC GTTTTTAAGGAATTTCTGAAAAAAAGAAGCTTTTTCAGGCCCTGCTGGCT GAGAAATGAGCCTTTAAAAAGAGTCAAAAATATTTTGACTTTGTCAAGTC CTTTGCGTGCAATGAATCAATTAATCCAAGCTAAATTAATAAGTTAAAGA GTTACTAATTTGCGCATGATCAAAGAACACAAATAATCGATACATTCGAA TTATGAACGGTGCATCCGTTGTTCCTTAATACCTTTTTATTATAATCTTT AAAGGTAAACAAATTGTAGAAAAAGAAGATAACCAAACAGAAAGCGAGAA TGCATTCAAAACCTACAAGGAGATTACTAAAATCATTTCCGATGACCTTG GAGTTCGTGATGCTGAAGCAATAACAGAAACAGACTTAAATAAACTTGTC AAAATTTCAAACGTACCATTGACGAAAGATGATATCAAACTTTTTATCAC GGTCAAAGAGAACAACAAAAAGTACAAAATGCTGGCCGTTCCTGACCTAC CAGAGGGGAAAACACTGTCACCACCAGATCTACAAAAAATCGAATCGCTT AAACTAGATAAACAATTGGAAGTCTTCAAAGGTCCAATTGACAACAAAGC TCAAGCACCGATCGATTTCTCAACGATGACAGCGGCTGATTGGGTGAAGG TTATTCTCAACTGCAACATGACGTATGGTCGTGTTTTTCGTAAACTTGGC AGTCCAAACGACCGCGGAGCGCAACCTATGTTTTTCCCCCCTAACGAAAT GCTTTTTGGAACTTCTGATTTTAATGTTTCACAAGTAGCCTTATTTTTCT CACAGACTTCTGAGAAAGTCGAAAATTTCAGCGACAAGTCTGTCATGACA AATCTATCCGTCGGGGCTTCAATTTCGACGCCTTGGGTAGCTGGCAGTGC TGAGTTTTCCCACGAAACAAAAAATAGAACTGCCGAAAAGGGTTCCAACA TCAAATCTGTCTTCAAAGTCGAAGTTCCAATCGGCATATTTACCTTACCA CGGCCTTCAGAGCTGAAAAATTCGAAGATCAAGTTGAACGATGACTTTAA ATCATTTGTTAACAAGTATCTAGAAGATCATCCTGACTGCACTAGGGAAA AAATTCAAGAAGCGATGACTGAACGTTTCGGAGACGTTGTACCACAGAGT GTTAAGATTGGCGTAGCATGTTACACGACCGATATAACCAAATTGGAGGA GAGTCAATCATTAGAAGCCGTTTCTAATTCGTTTGCAGCGAGCGTGAAAG GGGCGTATGGGTGTTTCAGTGGTGGCGGCCATGCTGGTTATGGCCAAGGC TCGTCCAATAAAGAAGGAAATTCTTCCCAAGACAAAACCTTTACATTTTC TGCAATCGCTGGTAGCCTTCCAGATCCTAACAACCCAATGTCGGTGGCTG ATTACCGTGTTTTACCGATCAGTTGGAGAATCATTGATTTTGGAGATGAA TTTACGCCAGTGTATGACTATCTGGATGAAGATGTCAAGGACCACTTGAA TAAAAGTAAGAAAGTTTCTTTTCCAATCTCCCTGTTAATTTTTTATAAAC AACCAAAAACTGTTCGCTAAAAAAAAGCCTTTTCTCCACCAGGTGTTTAA ACAAATCAAAGGCGCCCTTCAGATGTGTCCTTTAGAATCTGGAAAAAGCA TTCTACTGTAGATATTTCTCTCCCATTCAGTTCAATCGTCAACAACGTCG GTGAATACAGACAAAACCCATCTCTATCCTGGTCAAAGTTTGGACAGAGG TGATCAATTGATTACATCTGGATTTCGATTGATAATGCAACATGATGGAG ATCTGGCTTTGTATTGTGGACCATACTCAAACTTGCTTTGGAACACGGAC ACAGCAAAAAGCAAAGCCTGTAGACTCATATGCGAAGGAAGTGGCAATTT AGCACTGGTTGATAACGATGGTAGGACCCACTGGGCTTCAAACACAGCTG GTAAAGGCATTCAAAGATTCGTACTGAAGGATAACGGGAACTTTGTCGGA TATAAAGGAGAAGAGATAATTTGGCAGACAGAGACAGCCAACAAGTGTAA GTAATATCACTTTGATTGGACGTTGAATATAAAAGTGTGAATCTCATGGT CATGAAATATTGTAAATACTGACTATATTCTGTTCTATGTCTCAATTTAA GGATTTCATAACTAACGCTATACTAACTGTTTATGAGGGCAATTTCTGTA CAATAATGACCAATGTTAAAAAGTATTGTCCCGAGCTTGCGTGTTTGTCC CCGTTAGAATTACCGCGGGATACCAAGTTGAATCGAGCGTCATAACACCA GAACTAAACAAGTTTATGTTAATATCTGATGATATCTAGCGAGTACCTCA CCCAAAAGCCAGAATTTTTCAGTTTCTTGGTGAGTTACACATTGATAATT TTCGAAAAATTGAAGACTTTCAAGTGTTCTTACGCAAATTCGATTGTCTC TTACTACAAGAGCTTCCTAAGTTTAAAGTGACATAAAAAATCGAATGTTT ACAGCCCGAAAACACGGGCTCCAAACATTCAAAAAGGTCGCAGTAGTATA TCCCTATTGCTAATGGGAAGCTTATGGCGTTTGTTATTTCGTTTAGTCAG CATAGACGGGACATCGATGTTCAAAGGAGCAACGTTGAGAAAAGGAAACA AGCTGGTTTCAAGCAGTGGAAAAGAAGAACTACGTTTGAGAATGGATGGG AACTTAGAATGGTGTGGTCAAAATGGTGGACACCAACTATTATCGTTCAG TAGTAAGAGCAACACTCAAGAATTGCATTTCGATGGAAGAGCTCTCTGCG CAATTTCACGTCAAACCAAATTAGTTGCAACACGTATGGTTTGGAGCATT AGAATAAGCCTTCAGTCATTGGCCAGATTTACTTTGATAGACGGGCAGGC ATTGAAAGGATATGATAGGGATGGGAAGCTTATCGTTGTTGAAAGCANTG AAATAAAAGAGATGAAGCATTCTTCAGAAAAAGTAATAAAATTGTTTTAA TAACGAACAAACAAATCAAATGAGAGCTTTTAATAACTTGCCCCTTTTAA TGACGTTTTCGAACCCACAAATACACTGAGAGAGTCTTAAAGTACGTTAA GACTGAATCACTGACAATAAAAGTACTCACCCGTTGTTGACACGTAATCG AGGAGCACAAGTAGCAGTCACCAAGTGTTGACCATCCGGACACCATTGGA AAAACGTTGTATCAGAAGCCTGAGTGAAAGAAAAGAAGTTTTTAAAGTCA ACTCTCTCTCTCTTCCGAACCTCTTTTATTCGAATCTTTCTGTAATTCGA ACTAGAACATTGGTCCCTTCAGCTGAGGAGTGGTATAATTCTCTGTAATT CGAAACTCTTCAACTCAAAGAAAATCTTTTGTCCCTTGAAGATCGGATAG GAGGGAGTCAACCGTAGAGGCTTTTTATAAACCGTTTATCATATTTTGTA GAGGCTTTTTATAGATTCCCGAATCATAATCATTTAACTTTTAATTTTCA ACTTTCATTTATTATACGATCGAATGTAAATAATAACACTAAATGTTTTT ATTTAAACACGTACGCACTTTTGTTAGTATTTATCAAAATTGATCAAATA TATACTTCTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020640TCONS_00020640Clytia hemisphaericatranscript
TCONS_00020639TCONS_00020639Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020640-proteinTCONS_00020640-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:26611..31572 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.44 0.84 1.36 1.11 0.72 1.36 1.73 6.96 7.27 5.24 6.8 15.58 15.24 2.81 3.28 3.88 3.97 21.44 22.27 3.82 3.68 1.08 1.13 2.04 2.3 2.19 2 0.71 0.46