XLOC_011596 (gene) - C. hemisphaerica

Overview
NameXLOC_011596
Unique NameXLOC_011596
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000363:8..3586+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011596 ID=XLOC_011596|Name=XLOC_011596|organism=Clytia hemisphaerica|type=gene|length=3579bp|location=Sequence derived from alignment at sc0000363:8..3586+ (Clytia hemisphaerica)
TCTATATAGAAAACATGTCAGAGGGAATGCGTGCAGGCTAGACCCACTac
tgtacatgttttttttcgcAGGTGATGCTGATGTGCACGAAAACGCACAA
GGTGCGATTTGTCTTAAACTATTTCCCGGCCATATTCATCATTGCAGCAT
GCTGTATTTACTGCTACAAAATCCGTGGGCTACCTAAAACGTACAATGAA
ACGAAATTCTACATCTTCACTGCATTTTGCAGCTTCACACTTCTACGTAA
GATTCTATTATTATGATATTTCTTATCGTTCTTCTTCAAGCATATTTTAG
TTGAAAATCGGCTAGAAAAAGGCCAGAAAAGCTACAGATGTCTAACATTT
CGCGATGATAAGCTAATGTTTGACTTATTGTTTGAGTGTATGGGGAGGAA
CTGAATTCAATGTGTGGTGGATACCAGGGTATTTTTCAGGCACTTTTTAC
CACCGACTTTCAAGGAAAATCTCATATCAAATTGAgttttaaaagtcaat
tttgcgaagaaaaaaatgtgaaaaattataTAACGCAAAGTCTAGAAACG
ACGGTACAAAAACTTCCAGGAAAATCAAGATGCTGTATTGCAATGAGTCT
AACAACAAGTAGCGAGATTGTTCAAGTTAGGATTTTTAGGCTATTAAAGA
TGAATGAAATCACCTATTTAGGGCGGTTAGAGGGCaatgatttttggacc
tacctccgggtaccccggtggaggtcctttaaattaagccggaaaaatta
tttttttcgcatcttcttgagattttatcattagtttttgcttatttatt
gctcaaagatgcgtattaataatgccaaaacatggccgagtccgattttt
gagaaacatttttttccggcggaaatgtgccggaaatcgccgtttttctg
ggttttcattggactttttccttataattggttgttttttcattcaaaaa
cactATTAAtaccaccatcaagcatgttttaattttcaataaaattgttt
ttttgaagctggaactatttaaaaatcgtcggaacaacctattttcgccg
gaaagacagtatttcttgaatttctcgagctgtactttatatttttttgt
gaaattttgcacactgatgcaaaatgacaatacctaaaatgtgacggagc
ccgatttaaaaaaagaaatttgccggaaaaatcggttttttgacattttc
tttaattttcatcattagattttctgatttttttgcagaaagatgcgtat
tcgcaatgcttaaaacatggccgagttcgatttttgagaaaaatcttttt
ccggttgaaaatgccggaaatcgccgtttttgtagattttcattggattt
tttccttatatttctatgtttttcgcacaaaaacattattgataacaatg
ttcaccatcaagcatgattcaattgtcaataaaactgatttttgcgacta
gaactttctatttattcttTCCCTACAAGCCTTCCTTCtctccccatcaa
caatcaatgatgaatttattgcgttatgcatttttgctaaacgctatatt
tttgactgatttttttcatttttctcctcgcattgctatctaatattcat
cattaggtaggtccactcagcatctagcttgttaccACTGCATTGAAACT
CAATTTTTCCGACCGGAACGGTGGTGAGGAAAAAGTGCCTGGAAAAAACA
TCTGGATACGCTTAGcattcactgacctttatatatccctggaccaagtt
atatCCGCGgagtttgtttttgaattggtacccgagtattcgaggaaaag
tagatctagcgctcttgatgcattttcaccgctaattgagtagtgccgcc
attagggtactaTTTCCAAAAGAACTCCGATCAACGATTTTTGGTTGGCT
gggattgagtaacttggtccaggggtATATAAAGGACACCCAGCTGGCAC
AGAACGTTCTTtgaacgtttatctaacgttcacaacgcccatataacgtt
agatgaacgttaaaacaacgttgtgtgccagctgggactgACCTTacgtt
ttatcttttttagttACCTTCATGGTCACATTTCAGTTGATCGAAGAATC
AGACAACTATTACCATGACATGGCCAACGCAATCTATAACGTCTTGATTG
CGTACCTAATCATTCTTACACTCTTCGTACCACGCCTCATGTATTTGCGA
CACGGCGACGTGCCCCCGTTCACGGCCAATTCCTTCTTGCGTGATCGTTC
CGTGTCCGGAGGCTCCCGTGACCGCGCGTACTCGTTCCAACGTAATCGAA
CGCCGTCTAATAACGACTACGCTAACGAGAATGTCAACATGGTCAATCAT
CGCGATTAGTAGCGGTACTGGCACCACCATTCACCGACATCGTCCTATCA
TTTTCGCCATGACTCTGAACATTTCGTCCAAGCTCAGAGTTTTTTATACT
TGTGCTTCATAAGCGTGGTTATACCTTTGATTCGGCAATCCTCTCAGAAG
GTGGCTTCCTGCGTTATTTGAACGTCAAACATTAAATGGACGACGTTTTG
CCGTTTTGTGTCGGTGTGCTTACATTTGTCAGTATCGAAcaaagtttgct
tgttttaaaGTTGACGTTTCTAGCCGAGATTTGGACGACTTTTTGTTGTA
GTTTTTAAAGAATGTAAATAATATCACATACTGGTTATAAAAAGCTCTTA
TATATTAGCGATATATTATTATACTTAGTTATTTAGAGTAGGGATAGCCT
GGTGAACACCAGTTCAGTTTGATGTCTGAACTGTTAAGTACTTTCAAATG
GGTTTGTTTGAACGAATAATAGTAAGGGGCAGAAATTGTAAAATATCAAT
CTAGGTTTTTTTTTGATACAATAACGTACCTAGTTTGCGGTTTTGCTCTT
CTGTAAAGGTGTTTCGCTTTGTCTGTaaatatgtaaaatattttaggcCA
TATTTTTTTCTGTTCGAACTTTCTTTTTGTTGTGTTGAGTTTTTTGTTAA
CTTGGGTCAAGTATCCATACTAATATACGGGTGGGAGGTCTCGCTAAAAG
AATCTAATTTTAGTTTCTCAAAGGGTTTTAGAAATATGCAAAATTCCCGA
TATTTGCGCCTCAAAAGGTTAAATTTCGTGAAGAAGTGTCGATAAAAGAA
GAGTCACAAAATgccaaactttttaaatttttcctcGATCTTTACCAAAT
AAtatccgattttcgaaaattttgtcgGCACTCACCCGTCATCTGATAAG
CCTGGAACACATTTCCTTATTTTACTCTGTGACCCTTTTAATTCACTCAC
TATGGGGTTATATTGATCAAATGGATGGCCTAGGTTTTCAAGTGTTAGTA
TTTTGTTAGCTTCAATTAGAACTTTTTAAACTCCTTTTCGGCGAAAATTG
ATGAaatcgtttttgtttttttcttcattcttttAAAGTGccaaattcaa
atttcatcaGTTGAAGATAAAGTAAAAAAGGTCAAGTTTGGGTTCGTCGA
AAGCTATTTTCACCAGACTATAAAATTAGGTCATTGATCAAATTTACAGC
AACcgtaagaaatttcaaaaagcataaGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020667TCONS_00020667Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020667-proteinTCONS_00020667-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:8..3586 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.75	2.89	0.78	0.78	0.12	0.17	2.91	3.22	5.61	3.66	8.01	6.55	6.05	5.79	14.18	16.72	6.09	8.13	3.22	2.9	8.21	8.48	10.4	11	7.54	10.18	0.75	0.74	4.35	5.36