XLOC_011606 (gene) - C. hemisphaerica

Overview
NameXLOC_011606
Unique NameXLOC_011606
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000363:46745..58222-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011606 ID=XLOC_011606|Name=XLOC_011606|organism=Clytia hemisphaerica|type=gene|length=11478bp|location=Sequence derived from alignment at sc0000363:46745..58222- (Clytia hemisphaerica)
ATACAGACTTTTTTCGATTTTTATGAGGGTTTTTTTTCCAGGGGAGCGGG
GGTTCTAGGGTTGGCGGATGACGGGTATGTGCGGACGGGACCTCCGAAAA
CCGACCCTTAGTGAGACTAATTTTTGCAGAAAAGATGACCCTTAGAGAAA
CAAAATTGCTAAAGAGGTGACCTTAGAGAGATATTATCATAAAAATTTCT
TTGATTTTCAAAAGAATTCTTCAATAATTTCGACAAAATTGTCTTACTTT
CTTGACTTTTCACTTTTCTTAGAGGAGACTAATTTAAGACTTTCTGTTTT
TTGCATCCCTTGGAGAGACTTTGAAATGTGAAAAAACCGACACTTACGTC
TGCACATACCCAGCTTTCATTTTTACGAATGAGTACTTATGTACCAGTGA
TAATAAAAGAAATCTCCAAATGTTAATTTTCAGAAAAGAATACGAGAATT
CCAGAATAATTCAAAAATCGAGATCGTTAACAATGAAAATACAACCATAT
TGGAAATCCCAACATCACCATGTCCTCCAGAATATGAATGCTCCATCGAC
ACTGGACATTTCACCGTTATATTCTTGAATGATGCTCCATTTGAAAATAT
GACTGAGTATTTTATAAGGTTCCAGAATACAACTGTCAAAACTCAAGATA
ATATTGTAGGTCACATAGTTACCAGAAAAACTTGGAATTTTGTTTATCTT
AGCTTCAAGGAAAAAGACAAAGAGACAATAAAAGGTATGTTTTATCTACA
AATACTCTTAGATTCCTGACTGTGTTCCTAGTTAAATCTATCTGCTTATC
AGGAGGTTTTCCAGACCTCAAAAATGAGTTTTTCAGGATTTCCAAAGTTG
ACTGTAAGGGTCGAAATGAGAGGAAGTGGTGAGAAGGAATTTTCAAAGAA
CTGGTCAATTTTTCACCGAAAAATAAAAATTTTCTAAATTTGCTAAATTT
TCACTGCACTGTAAGCCACTGTTGAGCCACACATATGGTCGATTGCCCTG
AGAAGTGAGAAGATTTACCTCGCGGGTCCTTTCTTATTCCAACCCAAGTT
CATTTGACAAATTACCCCAACCTACCCTACTTAGCACTATTAACATAAAT
ATTCTTGGTGATCTCTGTGCCAGATATTTTGTCTGTTGATTGATTATTTT
TTTACAGCGAACTCAAAAGTAACTCACCCCTGTCTCGGTGAACCAATAAA
AGAATTTGAGCCAGTGAGGATAAAATAAAAGAGACTTGATGAATGCCCAA
AATGATCTTGTTTTTAATCCTGGGGGGGGGCACTTGATTTCTAAACGACG
GCATGTTCCCCTAAAACATATGGCTTTCAAAATCAGACCCTTACAGTGCA
GCCCTTGAGCAGTGAAAAGGTACCCTTACAGTGCATTTTACTGAATGTTT
CCGACCCTTACACTGTTACCGTGAATACCACAGGTCAAAATCATATATTG
ACGCTCAGCGCGCAATCAACGAAGACAAAAGTAACCATGACGACCATCCA
AGATCTTGGATGAAGTTCAAAGTTGATATTTTTATTCCCGTCGTTGAAAA
CACAGCTTACAAAAAGTCATCAATGCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTCGAAAGAAACTCATTTCAATTACACTTGGAGGTTTCTGGGGA
ATTCGTAAATAGTAAACTGCATACTGATACAGTCTGTTAGACATTAATAT
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAATATTTGCTCTTCATCTTTGATTTTTTCTACA
GTGATTAGATTGACACATGCGCGATAAAATTTCTATTATTGGTCTTCAGA
GGTTAATATATTCTTTGAACACTTAACCTCTGATACTCAGGGTATTACAT
TGTAGTTGGTTACATATCATATTTTGCTGAAGCCAGCTGAAAATGAGTCT
GAGATGTCGATACATCGATGCCTTGTGCGAAACAAATCAAAATCGGTGCG
AGTCAAAACTATAAAGATACGTCAGATTTTTACTGTCAGTAAAACATCAA
TCCAGCAGTCCCCAAATACACTCTTACAGTGTATCCAGCTAAAAGAAGAC
CCTTGTACACGTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTT
AGAGTGCCTAAAAACTAAGAAACATCTAAGAAACATGCCGAGCCTGAGAA
TGAGAAAATAACATTTTTTAATTCAGTTTCTTTTTAACTTTCCAATCCAG
CCTTCCATGAGGCTGATTACGTNAACATTTTTTAATTCGGTTTTTTTTTT
AAGAACCTTCCAATTCAACCTCCCATGAGGCTGATTATGTCAAAAGGTTT
AGAAACATGTAAGAAACATTTAAGGCCGATTTCTTAAGAAACATTGAGGC
TGCTTGGTAAAACTAGTTTCTTAAAAAAAAAACGTGTAGTGCACTCTATC
AAAAGTACACCCTTATGCATTTCAAGGGTCTCGAAGGACCTACCCTTAAG
ATTGTTTCCAGCTCTAATATCTAGCAGAGATTTTTTAGCTAGTAAGTTTA
TGGTAAGTTTCTCAAGCGGGGTGAGAGTTTAGTATAGCTTTCTGATGGGA
ATGTAATTTCCAGGTATTTCCACTTAGGTAAAATGGGTGTCAAGTAGATG
CGACCCATAAAGATCCCTTTTTTACACTCTTAAAAGTCCATTAGAGGACT
AAATACAAAAAATTGATTCCCTAAAGCGTCTTATATTGTCGTAGCTTTGT
CAAAATTTTATAATTCCGTCTAACATTTTAGTAAAATAATCTATTTGTCT
TGTAAAGACGTAAAAAATTGGACAACATTCTCAAAATTCAGTTTCTCTTA
AGGGCTCTGACTATAGTCCAAAAATAGATTTTGGTTTTTGAACACAAAAG
TTATATTTCAGGTTCCTTAACACTTTCAACAAAGAATTGCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTTTATCTAACAGAAAA
TGTATAACATGCCATAGTTTTGTTAGTTACATCAGTCAGAAAAGACATTT
TAAACACGGCAATTATGAAAAATTCACTATGGCCAGACCCCTTAAGTGTG
GATTTCCGAACTTTGGCTCAGACATACCCGTCGATTCGCTAACCTAAGTA
GTAGCCCCTCCCCAAAAAAATATTCTTCCGACTTTCCGGTTTGTTAGGGC
TCGATTGGATCTGTTTGAAAGAACCAAAGATTTCAAGGCGCTAAAATACC
GAAAATAAACTAAGAGTTTTACCAATCATTCTTTAGATTCTGATAGCTTC
ACCAGTAGCTGTGGTAAAGACACAATGACTTTGAATCTGACCAAGAAATA
TTTACCAATTCCAAAAGAAAATGATGATTATGAAATCTCGTGGCAAGATA
ATTCGTGTAATAAAACTCTGGATGATGGAGGATCACTAACTTTGAAAACA
GGTACTCTTTTAATTTTTATATGAGAAAGTTTGCTCTAAACAGGTTTTTT
TTTAATAAGAATAATGTGTATCCGTACTCATATACATTATTGATTATTTT
AGAAGAATTTTTACGGCCTTGAAGGCTGTAGAACATTTTTTGTCTAACTC
GTAGGAATTGGATTGGGTTTCATGGTCAAGCAAACAAAAATCAACAGTGA
GTCTTTCCAGCGAGATTTTAAGCCAAAAAGTCAAAAAAATGCAAAAATTT
GACAAACTTGACAAAATTCCACTTTTTTTAATTCTGACCGTTTTTTGACC
ATTTTTGGTCAACGAGGAGTGATCCAAGAACCTCCAAAATTGGCCCTGCT
CTACTTGATTCTGTTCTCTAGCGAATTAATTTGAAGTTTTACTACTGGGT
ACCTTTCTATCATTCAGGCAGGTCCGCGCAGCGGGACGAAAGAAAGAAGA
GACTCTAAGCAGGGGGGGGCACGCAGTTACTACAAGACAGTATGACACTT
ACTACCGTGGTGGCACTGTATTCCTAAGTTACGAAAACAGTTACTACACA
GTGTAGTAACTGCTGTTTGGGGGTGGTGCCAAACACTAAAACTAGCACTT
TTGGTGTAGTAAGTGCTTATATTTTAATTCCTTGTAAAGAACTTTCAAAA
TTTTTCACAAAAAATGAATTTTTTCGAAACAATTCTTTGTTAAAAAAAAT
ATTTTGTTATAAATGGACGAAAAAAAATTTGAAATTTTTCTCAGACCCAA
CTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTTCTCAACAGCTG
TTAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTGTAGTAA
CTGCAAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAAAAAGCACTTACTAC
ACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCTGCTCTAAGCTATATC
CATCGAACTCTAAACGAGCTTTTAACTCCTTCTAGATCTAGAGAGATAAG
CCTTTAAAGTTTGAACTAGTGACTTCCTTTTAAAAACTTTTAAAAAATGA
CCGTGGTACTTAAAGGGTTAATAGAGAAGTATTATAATGAGAGTTGACTT
CATTCTTATTTCAAACTCAGCGTTTAACGGGGAGTCGACGCCAATTTTCA
GTAAAGTGAGATATCTCATCGAATAGCAAGTCTATCTGAATGAAGACTGC
CTGAAACGGCACAAAACTGCGACTATCGGATAAATAGACTTATCTCTTTA
TTCTTGACGGAATAGTGACTTATGTATCACACCCCCTTCTCACAGACCCG
GTAAGATTTTTTCAGCCAGTGGGAATAAAAATAACGGAGTGAAACTCGAT
GGGGATTGATATTATCATATTTTTTATGGTTGGGGATTTCAATTCTTTTA
TTTTTAAGTCAGAAAATTCAATGGGGATAAGAAAAATTGTAAATATTTTG
CAGTGAGGATTGGTTCATTTGATTATTTTCAATTGGGATAAAAATTGAAG
GAAATTTTTCCACCGGGGACGATATTTTAGCCAATTTTTCCAGTGGGAAG
GGTTTCCAGTGGGTCTGTGAGAAGTAGGTGTTGTATCGGAGGATATCGAG
CACGACGGTAAGTGAAGTCGACGCATAACAAAGTCGATGGACATCAACTT
TACGGCTCTATAAAGTTACAATTCTTCCTTTCATATAGGTTACACGAAAT
GTGGTACAACTTCTCACATAGAAGATGACGTCATCATCTTCCGCAATAGA
GTAACGATAAGACAGAAAGGCAAAAAAATATCAAAGGCACATTTGGAGGA
TGAATGGGAATATGGCAGTTATGTTGTCGAGTGCAAAATCCCCAATAATG
TTAACATCAGCACAAGTGTTCTGAATATTACGATGAAAGATACAATTTCA
TCAAGAACCTGTTAGTACAAAGATATTATGATATGATATGAGCCTTCCTA
AACGGGGAAAGGGTCCTACTCCTTCCGAAGAAGGAATTCCTTCTTTTTCA
AGTAGGCACAGATACTATAATGCATAGTGATGTCACTCGAACTACGCGGG
AGAGAATAGAGCTCATGACGGGATATCACCCACACTCTTGTATCAGAGTA
GTGGTACCCAATTCCCCTCACATGGTATGGGCTGACCCGGGTGAAGGTGT
GTCCACTTGCCAAGTGAACCCGTAGTGCTATATTGTGAATCGAACTCGAA
CCTCCCAGAGTGATGACCACCACACCATTGCGTCTTAATTAAGCAATTAA
CTATAACTATTAGGTGACAACCACAGATTTCTGTAAAGCCCAAAGAGCTA
GATGGCGTGCTTTAAGTTTTTCCAACTAAAAAAGTGAATATCGCACGGCA
TTCTTTTCAGCCAAAGCACTCTATCTAGCCTGGAATTTATAGAAATCTAT
GGTGACGACTTGACGGTGAAAAATTACAATCTATTGAGATTTTTCGGCTT
TTCACCTGCTTTGATACAACTTTGATATAGATTTCTTATATTTTCTTAAT
TAATTTTATTTCTTTATCTTTGAACCTTTGAACAGTACAAAAAATATTTA
AATTACATTTCAGCCTCTAATGACAAATTCAAAATGGAAATGAAGCTTTA
CGAATCGAATAAATACAGTACACCGCTCTCATACCCTGTGGTGAAGACAC
TTAATGACAGAATTCACATGAAGATTGAATTATTTTCAACTTCATCTTTG
TCAATCTATCCACAAAATTGTTTTACTACTCCAAGTCAAAACAGAAACCA
CCCTATGAAAGAGTTCTTAGTGAAAGACAGGTAATGGTTTTGCTAACTTT
ATTACCTCAAGAGAAGAAATTTTCGCGGAACAAATTTTTGCGGAATTCAA
CTTCGCGGTTTTTGACAAATCAGCGAAATTCAATTCTGCGAATGAATGAG
TGATGACCTCCTAAGATCAAAGAATCTCTACAGTGAAAATGAAAGTTATA
GCACTTTTCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTTCAT
TTTTAGAATTTTTTAAAAGACTTTTTGATTTTAAATTGTTTCACTCACAA
ATATCTCTCCAACGATACCAAATTTATGAAGATTGAAGAATTCCTTCAAA
AGTTATTAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTT
AGTTCCCGTTAAAATTAGTTCCCTTAAGGTAGCGACAACTTCACACCATC
GGCCGATCTGCTTTGTGATGCTTGTGGTGTTTTTAGGTACAATATAAACA
TAAATCTACCTCCTATCCTGCTTTCTACCAAATATGGATTTCGAGGCCTA
TTGTATAATGGTTACCAATAAGATCTCTAGATACGTCGAAGCTATAGGAG
CCGAATCCTTACTTGGCTCTGTAACTTCCCATGCGAAATTTATTATTTTC
TAACTTCTTTATACCATTAGGATTTTGAACTTTCTACTATAGATGTATCA
CTAAAGAACATTCGATGGTCAGTCTCAAAAAGGCGAAGGAGCTAGAAGTA
TCTTTTGACGCTTTTCGGTTCCGGAATACGAGCGGAATTATTTACATTCA
TTGTTCTGTACTGATTTGCTTGGCCAAAAACAATGGGGTTGGAGATTGTG
CATTTGAATGCGACGGTGGCTCTTCAAGAAGAAAACGTTCAACTGGTGTC
CGAAATTCACGGTCTACGGATGATCATTTTTCGGACAGATACGAGATGGA
AACCGGGGCTATTGTAATTCTGGAAAATAACGGTTCGTCTTTTTCTTTAT
TCTACTTTAATCAGATTCATTTTTGTAAGATTAATTTCGCAAATGAACCA
AAAATCAACTGAAAATAATGCCTAAAACGCTAATACTTTGTCTAAAATAC
AGACAAGTACAGTTTTTACGCCTCAAATATCTTTTATATTGCGTGCGATT
CATTATCCCTTTTTTGGAACTACGAATACCCTCAACTCAAGTACTATGTA
GTACATATCTAACTGGACGGTTTAAAATGTTTAACAAAATAACACTTTTA
TTCGCATATTTCTGGAAAACAGGCTCAGTTATGTTTAAGCTACATTTTGA
AATCAAGCTCAAATTATGCTGTGATATGCTAATATCTGAAAAAACTTTGT
TCATTGAAAATTGAAAAGCAAACCTTCCTAAGTACACAAACCATGACCAA
TGACCAATGCTAATGAAATGCTATTTTTTTATTTCTTCCCCAAATCCAGC
TCTCAAGTATACTTATAAACGTTATGCTTATAAAAAACATACACGTCTTG
TCTTTTATAAGAACTATATAAGAGCATAAGGCTTCGATGGCCAAAATGTT
AAGAACAACTTAAGAACACTTTAAGGCTTCGCGGACTCGAAAACAGCCAA
TTTCTTAGGAAAATGGACAAAAATACTCAAAAAAATGCGAAATTAAGAAC
ATATTAAGAACATTTTAGGCTCAAAACTTAAAAGAACATCCGAAGGCTTT
AAAAAAATTTTGATGTTCTTATTAAAAAAAAAAACATATCTAACACGAGT
TTTTGTGTCTTTTTTAGACGAGAAGAAGCAAAGTAGTGAACATCAACAGG
AATCAACTGGACTTTTTCAAAACTCGACAAGTTTAACACTTTTTGTGGTC
TTAACAGTTGTCTTGATGATTGGTGCTGTTGTTGTCCTTCTTGTCCACCG
AAACCGGAAAAATCAATTGGTGTATAAAATGAACGAAACGGGAACAGCTA
ATCAAGCAATGGAAATGGAATAGAACGATTGAATAAAATACACCTTTTCG
ACCGTAGTCGTGCGGTCAGGCGGTCGTGCTACTTTATTATTCCATTTACC
CTAAACTTGATCCAATCCTTTTTTTACACTTTTTCATTTTGTCTTTAGGT
GCGAAAAAAAGACTGGCGCGGTTTTAGGGTGGTAAAACGAACAAAAGAAT
GCCCGCGCGGCAATTGGCGGCTACGGTAGAAAAGGTGTATTGAGAAAATC
AGAATCCAAGTCTTCCAATAAACTATACGTTTTTTTTTTAATAAGGAACC
TTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACAGAGAATTTCAGT
CTCAAAGTTCCTTATCGAGTTCCTTACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020690TCONS_00020690Clytia hemisphaericatranscript
TCONS_00020689TCONS_00020689Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Zona pellucida domain containing proteinTCONS_00020689-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:46745..58222 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.16	0.08	0.06	43.49	30.27	46.46	60.8	28.66	47.78	4.87	13.66	0.29	0.16	0.08	0.08	40.7	67.77	0.36	0.3	134.02	113.89	3.77	6.59	28.1	12.07	1.19	0.81	0.68	0.88