XLOC_011631 (gene) - C. hemisphaerica

Overview
NameXLOC_011631
Unique NameXLOC_011631
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000365:163870..171149-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011631 ID=XLOC_011631|Name=XLOC_011631|organism=Clytia hemisphaerica|type=gene|length=7280bp|location=Sequence derived from alignment at sc0000365:163870..171149- (Clytia hemisphaerica)
AAGAAACTCAGTCTTAGGAAAGTAAACAATAATAAAAAAATCAAAATGGC GTCCTGATCCGGCTGTCAAAAAAGGTCATTTCTTTTTATATTTTATGTAT TTTGTCACGTATTTTGTATTGAAAATTTTGACATTTGAATAGAGAAATGA CAAGCTGTTAGATGCACGATGGCTCTGAATTTAAGTATTTCGCTTTGTCC TTGACCTCCATTTTTGGTTATACTGACAAAAGAAAAGAAACAATCATAAC CAGATAATATCATCATGGCAGCAGAACTTCTATGGATTTTCAACATTTTC ATCACCACGATTTCAATTACCATAGCCCATAAAGGGACAGTGAATTTCCT GGTACACTCATTTAAAAATGATTCAAAGACCAATCAAGTATATGATACAG CAATAATGAATATGGAACAATCAAATTCCAACATTGAGTTCCAGTTTCGT AGAGCTGATGACTCATTTTTCTCTTGGACAGTTTTTTTTGAAAAGGTATA ATATCCTTATCTATAAAAATTAGATCATGTTTCAATGAAAAATGTGTAGG TAATATTTTTTAATTAGGCAAATGGCAGTCAGGGATCCTTGCAACCAGTC ATTTGTTTGAATAACTAATTCTTCTATTTCTATTTGGTTGAGTTGCAGGA GGCTTTAGAGGCCTATTCTCGCAACTATAGACGCTTACTAATGAGCGTCC CGTCAGCACCTTGAACTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCTGCACAGAAGCCAAG GTCGACTACCACTATACTACGGCACCTCCTTTAAATTACTCCAGCAGAAT CTTTTTTAAATATAACATCATACAGTATAATTAATTTGTCTTTTACAGCA GATCTGTTATCTAAGTATATACAAGGTAGTTTATTCTGTTTTTAATGGCT GGAGTAATCTGCTAAATAGACTGTCGTGTTCTCCCAAACAACTATTCATT ATATGGTAGCGACTCCAGAAGTCACGCAACTGTCGTTGACGTCAAACCAA ATGTTTCATATTTCCGTGAACTTTGAACCCTTCTAATTGTTTTAGTATGT ATGCTAAAGCGTTCCGGTTTTTACTAAAAGAAGGCCCGTGATCTTAGCTT TCCAGCGGTATATAACACTGTGGACTCGGGCTAGACGGCAAATTGGTAAA TGTTTACCCTAAGGGGCCATTCAAAAAGTACTTTCGTCCAAATTTCCCTA TTTTCAGACCCCCCCCCCCCCTTGTTTGTCAGCATTTGTTTGAAGTCCCC CCCCCCCCTTTGTACGTTCGTTTTTATCTCAAAATTTTTACCCCCCCCCC ACTTTTTCCTTTTAAGATAATTGAAGAATTTAGACAAGGCAAGTTCAAAG AATATGATTTTAGCGTTATTCTTTAATCTTATCGCACCTTAACTTTTTGC TCTCTAATTGTCTAATAATTGCTAAACAATTATAACATACACAATTGTTT AGGGGATTAACAATTATCTTTGGTTATGGATTCAAAGAAAAAATGTAATT AGGAGATAGATAGCAAAAGATTTTTCATAGACTAAGTTAAAAGTCACGCT TGTGACAAGCACCCCTCTCCCGCAAAAGCAAACGTACACAGATCGACTTG ACACCCCTCCCCCCCCCGTTCGTTTTCGTTTGCTTTTTTGCTGACCCCCT CTCCCCCCGTTCGTTTTCGTTCGCTTTTTTGCTGACCCCCTCCCCCCCCT CGGCGACGAACGTACTTTTAGAATGGCCCCTAACTCGAGATATGCCTTTT TGAAGTAGGAGCCAAAGTTGAGGTTAACATGGCCTGAGGTTGACACTGTT AAGGTTCTTTGACACCTTGTCATTTGACTTTTGAATTAGATTTTGAATAT GTTATAGCCCTGAAATTATCTCAAAGGGTTGAAAATTGCTCTGAAGGGTG TTATTTGAGGTTGACATTTATTAAAGGGCTCCAAAAATGAGGTTGACATT AGTTTAGTGCATAATTTTGATAAAGGTAGATCAATATGATGACTTTGGCT TACAAAATATCATTATTGACCATCTAAGAATCTTTTTCCAAGGAAATATC TGTTATTTGAGCAAGTTTTGAGGTTGACAATGCAACGTTTATTTCAATGC AAGGTAAAGTGCCTTATGACGGAAACAGCCAGAAGCTCTTTTAAAATAAT TTGTAAACCTCAATTATATTTGTTTTTAAGACAGAAAGACTATGGAATTG GATTCAAATGGTTATTGAAGCGTTTTTTTTAGGTTGACACCCCAAAAAGC CTTTTCTGCCCAATTTTGACTCAATACAGTCTTTTCCGGCTTGTCAACCT CAAAAACAGCTCATTTGATGGGTTTTGTTTGAAAATCTATCTTTGCTTAG CATTTTTGCCTTACTTAGAACATATTGTAATGTTCTAAGTCCAAATGTTG AGGTTTACATTGCATTTTAATAACACCGATTTTGTCAACCTCAAATTAGG TAATATAACAGGAAATCTTGGCTCTTTTAACACTTTTTGTCTTGTATAAC TATCCAGGGGTCTATTCTCACCAATTTTTACATTTCCTTTTTAGTTCCCT TTTCTGAGGATGACATTTCCTTGAAATGGTCATTTTTGGCCTGTCAATCT CAAACTGGCTCGAATTTAAGGGAAATACCTATATCTATGACTTTGTCTTC ATTAGCTCTATCACCTCCTGAAATCTTATTTCAGGATACCAAGTTTTGAG AAAGATATTGACAAAATTCTAAATTTGGTGTTTTTTTTCAAGAATTAAAA ATGTCACACTATTTTTGACCAGCTTCCCAAACGTTTTTGCAACATTTTTG AATTGTCTTCCGACGGGAGAAAAAGAATTTGCAACTATCGATGAACAAAT GTTTCTGGAAATGTAGGAAATTGTTGTTGAAGGCTGAAACTTTGTATGTT TATCAGAAAAAGGGTGAGGAATTCAAAAATCACATTCGCTAATTTTAGTT CTTTCATTTTCATGTAGTTTTTTTTCACTTTTTGCTTCTTTAGCATGGGA ATGCGCCAAAAAAAGTTTATATTTTCTTTTCATTTAGGGTTTCTCCTTTC AGAAAAACTTATTCTTTACTTATAACTTTTTGTTCCTCCATTTCCAGAGG CCCCTTGAAAATGGATCATATATACCACCTTTTTTTACTCATTTCAACCT TTTCCAAGCTACTTTTCTTCAAAAACAAAATAAAACAATGCAATGTCTTC TTTTTGCAAAAAAAGATATATCTTTCGTTATTTTCATAAATATACTAAAT ATTTTACAAATATTTTTATATAATAATATTCTAACACCATCAAAGAATTT TCCCTCCAAATTTCAGGTCTCTAGCTACACTAGAAAAAGAGGTATGCAAA ATTAAAGAAGCATGACTGGGAAATATTTTTTTTTTCTTTTTTGACACATT TTTCGAATTTTTCCAAGCCATTTTCCTAACCTTTTTTTGGACATTTTTAG TCAAATCTTTGACACTAAAATTTGAATATCTTTACAACCACTTAATCCTC TGGAGGCCTATTACCCCTCATTTTCTTTCTTTTTCAAAGAAGGTTGTTAG TGGCTGCACAGTTGCCAATATACAATGAGTAGAAAAAAAAGTTACCTTTT TACCCTGTGTTGTTCTATTGGGTAAATAGATAAGATTTTACTTGCAGAAA ATTAGCTTGATAAAATTTTCCTTGAGTCATTTTTTTCATTACAGAGTTGA GTATCATTTCACAAAATAAATGCAGTTGTCGTTTCAATTCTTATTTTGCT ATTTTTTAATTTTAGTCAAATTAGCATGTTTTGCCCGAGCCATCCTATCC TGTTCTTAATGCATTATTAAACCTAGTTTTAATCCTATTCTTACTTTATT GTAGGATATTCAAATTTTCAATAGCATCAATCTTGGGGAAAGTGAATTAA ACGAACAAAGCCACAGATTTATTTGCTTTTTAGCTTATTATGATGGAAAT CAGATAAGCCAATTAAAATTGATTGAAAGACTTTCTGAATCGGTAAGTTG ATTTCATTAACTGTCTCTGTGTCTTTTTACAAAGCCTTTTGAATGGAATA TCTTTGTTTTGCTTGTTGTTTGTGCTTTTGGAATATGAGGGGCTGTGGCT CCACTTTGAAAGTGACAGGGCTATGATAAACTGACGAAGGAGGAATTTTT TAATTTTAGCCCTTCTAGATCGCACAGGTTTGTTTTAACGTTATTAAACA AAGTTTTTGCCCCCCCCCCTGGTGCTGCAGTGCCTGAATATGCATTTCAT TTTATTCTTTAAAAGGTTCCATTCGAGTACGTTTTCAAGGAAATCAAAGC CCTAGAAACCAAAATATGGATAATGGACCAAGTAATACATCCACATGAAA TAGATAAATCTATCGCTCAAAAATGTCAAGGCTCTGATCTCATACTATCA AACAAAGAACAAATCCGTCAAATTGCAGGTAATTTGTCAAATCTAATTTA AGATTTATAAGAAATTATCAATTTTCTTTTGAATTCTTCAGTTGTTATTT TGTATGATAAAAAGCAATGAATTTTTGGTAATTTTAAAGACCAAGAAACT TGAGCTGTTTTAAAGGAAATTAGTGTTTTCACTCAACCTAAGGGGTGTGC CAGAAATAAGTTGTTACCCTCTTTTAAAAAAAAATTCTCAAATTCTGTCT ATATTCTCAAAGCATCGAAGAATTTCGTTCATTTTGTTAAAATTGCTAAA AAATCGGGGAAAATCGACCTATCGGTAAATCCCTATTTTAACGAGAACTA ATTTGGCCAAAATAAGTTTTCGCCCGTTTTCGCTGAAATAAGTTCCTTTA AAAATGTATAATTGATTTTAATTTTAAAAGTTGAATCTGTTAAGTTTATT ACAAAGACTACTTTAAGCGTACAAACTTTCGCGAACAGAAACTTTCGCGA TTTTAAAAATTCTTTGAAGGGCCATTTGCGAAAGTTTATGATCGCGAAAA ATTCTTGACAAAATAGAAAATCAGTAAAACTTAAAACTTTTGAATAAACT TTAACATTTACGGCACTTTTTAGCCTGTATAAGTCAAAATAATAGGCCTT TTAAGCCTGATAAGTCAAAAGACAAAAGAAGAAGCATTTGTCCAAGTTTA TGCTCGCGAAAGTAAATGTTGTAAATTTAACGATTTTTCGACCTCGTGGA AGTTTCTGTTCGCGAAAGTTTGTACGCCTAAAGGGTCCGTCCACATAGTA CGTACGCAATTAGGGGGGGGGTCTTCTCAAAAGCGTATGCTTGCGTACAG GGGGAGGGGAGGGGTCAAAGGAAAATGTACGTAGGCAGAAAAAAATTTTC ATAGCCCTTTTTCGCTTGTTATACGCATCAAGGAAAAGAAAAAGTTTCTT GATAAACATTGAGTTTCATGAATGAAATAATGGTCCGAACGAAACGATTT GAATTCGAAATTTTCTTCAACTAAGGGGGGCGGGTGAGTACTTGCCAGAG GGGGTATAGCCATTTGCATACGCTTGCGTATAGGGGGAGGGGGTACTCGA TTTTCGATATTTTAGTGCGTACGTACTATGTGGACGGCCCCAAAGTGCTT TAAAATAGATAATTTCTCTATTTTTATAGACTTCTCAAATTTGTTCAATG GAAAAGATCAGACGTTCCGTTTCCAATCATTGCCAATCAACCAATATCCG TTTTGTCTGTCATCGTCAGCCAGTGATTTGCAAATCAGATGTAAATGTCA GGCTATCCTAAACATAGGTTGGTATCCTTGTGGTGAGAGATCGTGTGATA ATGGCGAAGATAAACTCACATGCAACATGTTTTATTGCCAACGGACACAT AAGTTTATTTATCTGGTAGATAAGTGGCAAGATTGTTTGAATACTACCCT ATGATAAAGCTATCTTGGTTGATAATCTCATTATTGTCCACAATACTTTT CTCTGATAATGTTTTCACTCCTTGCTAATAAAATGTGATTCGATTTGAAT TTCTTGGTCATGAAATAGTGCTTTTGAAAGACACTATGAAGTGAATTAAG TTAAAAAGGCTCGATAGTTAAATCCGCAAAAAAATGCTGAAAGCTGGGAT TTGTTAAAGTTTATTATTACGCAAAAGAAATTTCCTTTCAGTGACATACA ACCTTCTGATACATTTTCTGCATGCTGGTGGATAAGTAGTTATGTTAAAG AAATCTTTTTTTACCTCCTTTTCACAAAAAAATTGTGAAAATCTAGGATG AAAACAAAATAAAAGTAGCAAAATTTCGACATTTTGTTCCAGCGGAGTTT TCGAAAGCTTGATTCGTGGCAGCTCCATACCCTTTGATGTCACGTTAAAG TGAAATACCTTGCAGCCAACTTGGCTAGGTCTTATCGTCCTTTTTCAGTT TACTTCACATGTGTGCCAGCGTTTAAGTGACCCAATAAAAGACTTTAAGA TAATAATTAAGCGAATGTCAGAAATAGTTAAACAAAATTCTATTATTATA GTCAAGGGGGGATTAGGAGTGTCTGCCTCTAGCTAAATGTGCTTACAGAC CAAGAGTAGACATGCTTTTATAAGAACATACCATCATAAGAATAGAGGGT TTCGATGACCAATATGTTAAGAACAAATTCAGAACATTTTAAGGCTTTAC TGACTCTATAAGACTCGATTTTCAAGAAAATGGACCAAAGTACTCACAAA ATAGTGAAAATAATAACATGCTAAAACTCAAAAAGTTAAGATCCAAATAT TCCAAACAATTTTTGGATGTTCTTATTAAAAAAAACCTGTAAAGTCTTAA AAACATGGAGCTGGCTACTGTGCAGACTATGAAATACCACAATCTTCTCA GACTTTGTACATAAACAATTTGATATTGACATATATACCATTTTTAGCAT ATTTATTTTTTGATGTTATAAGTTTAGTTTTAGTTTATTTATATACCATG TTATTTTATTATGTTAGAGTATTTATCCACCGATTATTTTGTATTCTTAC ATTTATATTGCTTTTTATATATGCAAGCAAAATATTTTATATTTTACTGT AGCAAAGAAATCATTGAAAATTTTTGATCTTCAAATTGTATCAGCCTCAG GCCTGTTATTTTCCTGTCGCGCGTTTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020734TCONS_00020734Clytia hemisphaericatranscript
TCONS_00020733TCONS_00020733Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020734-proteinTCONS_00020734-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000365supercontigsc0000365:163870..171149 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OAFout at first protein homolog precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.87 8.68 11.12 10.83 7.61 5.98 4.39 4.44 2.26 2.5 2.22 2.1 2.94 1.92 1.76 1.2 5.63 6.23 1.32 1.29 6.08 6.13 3.99 5.24 2.54 3.71 4.75 2.88 3.64 3.69