XLOC_011670 (gene) - C. hemisphaerica

Overview
NameXLOC_011670
Unique NameXLOC_011670
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000370:296821..300225-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011670 ID=XLOC_011670|Name=XLOC_011670|organism=Clytia hemisphaerica|type=gene|length=3405bp|location=Sequence derived from alignment at sc0000370:296821..300225- (Clytia hemisphaerica)
TTATTATAAAAGGGGTTAACCCTTTAGCTTGGGACTTAAACCTTTCAGCT
TGCTGCTTTGATTCCCTCCCCCAGAAAACTATGAACTCTTTTTTGTAGCT
TTACTTGAGTTTTTTATTGAGTCTTTTTTGGAAGATTTTTTAAAAATCTT
ATTAATAAAACTTTTTCTTTCAGTGTCAAGGATGGGATCTTTCGTCAGTA
CAAGTCATCAAGAAGTTTAAAAGATTTCCAAGATTTTATTATCGAAGAAA
AATGGAAGACACTTAAACCAATGACTTCTTGGCTTTCCCCTGATTCCTAC
GTGTAATTAATCTCTTTCCTTTGCGAAACACTGATTAATTGATTCTTCAA
AAATCTTATTTCCTCTTAAAGAGATTTTTTACTATTCTTGTTATCAAGGC
TTTGAATATTATGACATTTTTTTAGTTTACAAATTGGTAGTTATATTTTA
ACTTTGTGTTTTACTTTTTTGTCAAAAAGTATTAAAATGTCGATGAACTA
TTTTTATCTTTTCAGGATGACTGGAGTCAGTCAACTTTTCTCATTTTCAA
TGAACCTAAAGGTAACTTTTAGAAAATAGCATAGAATATCTTTCTCTTTA
ATCATCTGTTTTCTTTTTTTGCAAACAGGATAAACCCTCGTGTGTTGAAT
TCTTCCAGTTTATGCTCAATCCATTTCACTGGCTTGACCATAAAAACAAA
AATTATCTTTCGAAATTTGATCAACGGACATAATCATTATAGAATGTAGA
ATTCCGATATTTACTCAGTTTTAATTTTATGATTTCATTTTCAGAATTTC
CACGAAAGTTTGAGAACTGATTATGGTTTACCTGGTTGGGCATCCATGCT
TTTGTTCGGTTTAGCTGTTATTGTTATTGGTCTTCTCTTGGGAATTGTAA
GGTTAATTTTTATTCAGTCTAAAGATATAGAGATTTGTAAAGCAGTGTAT
GCCTTAAGAGGTATCTATTCGTGACTTTTTACTTTCAAGAATATAAACTT
CCTTATTTAAAGTTATGTACTAAAAAGGGTAAAAATCGTGAAAGTCTCTG
CTTGTGAAAAATTGTACGCCTAAAGTAGTCTGAGTTAGCTAAACGACTGT
AAATTACCTATCGATATTGATCACATGACTAAATTAGAAAATTCAACCTA
TTTGATTGCGGTTCCTGACCTGGTAGATAATCATTTTTCGAGTTTTTCGA
ATGTTTTGAATCTTCAGTTTTCGGAATCCATACATTAAACAGAGGCGTAT
TTAGAGTAGGTCAAGTAGGTCAAGTGACATAGTTCCAAGAAATTTAAAAG
TATGAAAAATTGTGAAACGGGAATAGTGTTAGCTAAAGTACAAGTGTGAT
ACAAAAGCGAATCTCGGATAAAATAACTATTGAAAGATTATAAACGCGAG
ATGAAAGGAAAATCAAACCTCTCCAAGAACTCCACTCGACTCAAATTTTT
GACCTACTTGGCAAAATTCCTAAATACGCCACTGCATTAAAGTTTTGAAA
TTCTCTTTCAAAGCTCCAGTAATAGCAAAAAAATCTAATTTGCGTCAGAA
CACTTGAAAGACTTTTTTTTATTCTTGGAATTCTTGTTTTTTATTGAGGC
ACTTCGCTATGAAAAGACTGACGGTAATTTGTTTTTTTTTTCTTTCAGGG
ATTAGTTCTGTTTATTGATTGGTGGATGGGACCACAACCAGACATGTACG
AAGGTCAACAAATGTCCGTCGAAGAAATTGATGGAAAGAGGGATGAAGGT
GAAAGCGAAGAAAAAGTGGAAGAAATTCGTGAAGCTGAAGAAGAAAATGA
AGAAGAAGAAGAAACTTCAAAGTCTACAGAGAAGAAAAACCTTCGAAAGC
GAAAAGTAAGTGAGATTGACTAATTTGGCACCTATCTATCTATATCACTT
TAAGAGTAATGTGTAGTTTTTTCGACCCAATGCTTTCTGTAGTAGTTTAT
TTTAAGAATGGGCTCTTCCAGAAAAAAAACGTTCATAGGGGGTGGAAGAT
ATATTGTCCAGGGGTATCGAAAAATCCTGAAAAACTGCTATGTCCATGGG
GTGAATTTGCAATGTCCATGGGTAATTTTAGTGTCCAGGGGGTAGATTTT
ATGCTTGTTCAGAGGTAAAACGCGTGTCCAGGGGGTGAAAAATCGAAATG
TCCAGGAGTAGATCTCTCCCCATGAACGAATTTTTCTGGAAGAGCCCAAT
AGATGGTCTTTAGCATCAATCAGTGAAATAAAATCATGACCGACATGATT
TAGTTTTTCTACGCACTTCTTGTTTCTTAGCTGTGTCTTCTTAAAACCAA
ACTAAAATTTATACTTTTGCCTGCTTCATTTTGTCATAAGTCATTGGGCC
ATCCCATTAAATTTCCATACAAGGGGCTGGACGAACCTTTTCAAGTCAAA
AAAAGATTTCTTGGAAATGCGTAGATACCCCATTGAAAATGGAAAGATTT
TACAAAAAATCCCTTGGAAAATTTATTTTCATCCCTTAAAGTGACGGTGG
ACGAACGAAAATCAGTCTTTTGCCCCTTGGAAATTTTAAAATAATTTTTC
ACTCCCTGGAGAAACAACATAACACTCTTTCAGATCCCCTGGAAATTCTG
CTCAAGTCACCCCCTGGAAATGTTCGTCCACCCCCCTGTATGGACCTAAA
ATGGAATGAATGATTCATTTTCATTTCATTTCTTTCACACTTCAGGTAAA
GAAGGAAGATTGAACGCTGTGAGAATGTTGTTTGTGGTGCAGCAAGTGGT
TTGAATTTTCACCATCCGTCAAAGCCAGTGATGTTTTACTGTCAAAAGAC
TTTACTTAGGATAGCTAATTTTTTCAAAATATTTCATATAGCGCTATTTA
TATTCTCCATGTAGCAAAATTATTTTCCCTCGCATCTTTTGTTTTTCAAT
TTATATAAATTTTCGTCAAAAGAACCGTTATCAATTTGTACAAGGGAATT
GTTTTTAGGTAATTTATTTTCAGTTATTACATTAGATTAGTAGACTGAGC
GTCATTTTTAAGAACAATTTGTAGGTTAACGTGCTTTTCATTAAAAAATG
ATTACAATTTCAAAGTGTTACATTTCTCAATATTTCAAACTGTTACAGTT
AAGGATCTAGAGATTTCTTGGTTCTGTTTGTGATTTTGTTGAATGAGGTG
GCTACTTTTTTAAATAAGCTAAGATCCACTTTAACGACGAAGACTTAGGC
GTCTTTCGTCGTTGTTTTTATTTTCTGTCATTTTCCTGACAAGCTAGATA
TTACTATACGATGCATTTTTTCCTTTTTTAAATAGTATTTTTTTTTTTGA
AATTTTACTAGGAAATGTTGTTATTCTTCAAAGATATGAATTGACTCTAT
CCCGAGATTTTTTCTCATTTTTAAATGCATTGCGAGGCCCCTTGTTATGT
GCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020808TCONS_00020808Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020808-proteinTCONS_00020808-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000370supercontigsc0000370:296821..300225 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.85	93.15	51.58	47.41	32.85	23.28	41.83	43.84	44.84	42.08	38.3	31.14	21.52	17.92	31.07	35.77	53.38	47.55	10.78	16.97	26.24	24.92	46.83	45.35	23.98	26.51	32.73	21.97	40.26	31.56