XLOC_011966 (gene) - C. hemisphaerica

Overview
NameXLOC_011966
Unique NameXLOC_011966
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000385:226420..234592-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011966 ID=XLOC_011966|Name=XLOC_011966|organism=Clytia hemisphaerica|type=gene|length=8173bp|location=Sequence derived from alignment at sc0000385:226420..234592- (Clytia hemisphaerica)
CGAGTAATCATCAGGTAACAAAGGAAAACAAAAATTTATTTTACTTTCGT TTTTCGACATGAATATTTTTTGGGAAAGAACTTTTGACTGTTCAGTGCTG AAAGAAGAGACAAAATGACACACCAACAGTATCAAGTTGACCGAAATTAT TTATGGAACATTTTTCAAAGGTATATAAGCTCAAAGAACTTCATCCAAGT TTTTTATTCTGTGTGTTTCAATGGACCATTTCATTCAGCCTGGCAAAATC CTTGTAGTACTGTAATCAAGGACGACCCACGGCATGGCCCGAACATATTC GGGCCTGTTCGGACCATGCTCGGGCCACAAAAAAGTATTATTGAATCGGC CCCCGAATATTTTTTTCGGACCATGTTCGGGCCATGTATTTACAATTGAT ATGGATTTGCTCGGGCCATGTTACCGTGAGTGGTCCTAAATCCGACAGCC CTGCCTAAATCCGACCCCCCAAATGACTGCTATGAAAAAAAATTCTATGT TTACAAACATTCCCTCTCCAAGTTGAACAATAAACTACTGCAAGAACTCT TGAAAAAAACATCTAACAATATGACTATAATGTCAAGATCTGAAGATGTC AATTAATGAGATCAAAAACGTGTGAGTTGTAAAAATAATTACCTCTATTA TTCTGAATCCGTTGCGCTCCTGTTTAACGTTAACAATTCGGACAATTTTG TATAAAAGCAATTATTGTTATTTGGTTCAAAATCAGTGTATCAAATTTCT CAGTTTAGTTGACACTTTGGTGGTATCTTCGTTGCGTCACAGTTTTTATT TTAGTTTGTATCTTCGATCTTTGAAAGACCCCATCGGATTTAGGCAGGGC TGTCGGATTTAGGACCACTCACGGTACCTTTCCTGGTTTATCATCACCCA TTGTTAAATATTTTCATTAGACAAATTCAAAGTTCCAAATACCAGTTTGA TTCACAAAGTTGTATAACAGTACAAAAAACGATCCAGAAAAATTCTGCTT CGAATAGGAGAAGACCACGAGAGAAAAGGGAACGGGATAAAGAATAAAAA GAAGACCATATTATGTAAGATTTGAATCATTATTTTTAGTAATTTTCCTA ACTTAATTGGAAAATAGATGATTAACTTTTATATTTGAACAATATATATT TAAATAAAGATGAAGATTTTTAAATTTGTTTGCTAAAATAAGGAATTTAA AATATTGGGTCCTGAAATTACACGCGCGATCGTAGCAAGTTTTCGAAAAT CTGGCCCGAACATGGTCTGAAACTGCGCGGGCCCGCGCGGGCCATGCGCG GGCCATTTTTAAAAAGTATTAATCAAGAGGCCCAAACATGTTTGGGCCAT GCCGTGGGTCGTAATCCAGGCGGTGTCAACCGAACCCTATCGAACCGATT TTCGTTATCGAACCATCGAACTTTTTTGAATAAAATCGAACGATAGCTGT TCGATTACCGAACCCGATCGAACAGCTATCAAACTTTACGAAAATTTCTT GATAAGTTCGATTTAGTTCGATGAGTTTTCTTTGTTCAATGAAGTTCGAT TGATGTTCGATGAGTTCAATTTAAGTTCGTTGTGGTTCGATGGTTGTGTC GGATAGATTCTACTTTTCTTTACCTTTCAGAAAATTACGAGGTTGTTTAA TCAAAACACAGGCACGGAATGCTTCTTTCTGTAAAGAAAGTAATAAAGAT TAAAATCTTTTTTTTTACAAATTAAACGACCAATACACCGCCTGGTGTAA TGTGTGTGTTTATTTTTGATCCAGAGTAGGCGGAGAAGTGTAAAAAGAAA TACCACCGTCACCTGCTCTAATTTGGGACGATTGGTCAAATCTTGGGATT GTTGATTTCTGGACTGTATTTTCACTTTATACTGTCAACTGCTCAAATCT TTTTGACATCAAGTTTGATTTGATACTTCATTCCAACCATAAAGTTGATC AATCAAACTTTCAACGCTCCACAATCACAACCAAATGTATTTTTAAAGCA TTTTAAAAGTATATAATTTGAAGATGTAATTAACAATTTAATCACACGCT ATTCACATCTTAATGCCATTTTTTGTGTTGTTTTTTCTCTAGAGACTTTT TTCCAGCGTGTGCGCGCGATATTGATTGACATGTCAAAGTTACAGAGTGT CGATAACAACAGATCACAACACAATTTTCCGCGGAGGAACAGACTTTTTT ATATCTGTTTTGGACGCTTGCGTAAATGCGTGCGGGATTGCATTTACGCT TTTCTTGTTGCAAAGATTTGTTTTTTTTGCAGGTTTGAAAGTCTACCTGG TGAGAAGTAGCATATTCACATTATTATATTTGGTATCTATGATTTGTGAT TATGTTAATTTTTAATGATTTTGGAGGTTCGGTGAAATGGTGACGGAATG GCTGTCACATGTTTTATTAGATAGTCCCAATTTAGAGTTTGACAGTAGAC AGCTTGGGAAATACCGTGCGTACCGAGCTGCGTAGTTGATTTGTTTTGAA ATTTTGCTGCTATGATTGGTCAGTCATTTGATGGCTATGCAAGTTTCCCT CTACTGATGCAAGTTACCCGACTTCACTGTACATAGTTGACACGTAATAT ACATTGACAGAAGTATTACCTATGTAATGTTTATATTTAAATCTGCTATA AAAATGAAAGTGGTCTCTTCTTCTCAGTGGCTTCTGCAAGTCTTTTTAAA TTCCAACCAATGAGATTGTCGCGTATGATGAAGGTTGAAGCATTTTTTCT TACCCTTAGTTCTCAAATGAAAGCAGGAATTTGATGCAAGCGTTATTCTT TCAAAGAATACTTTCATTTGATTGAATACTTCTTTTTAAACAATTTTCAC ACAGCAATTTTTTGATTGGACAAAATAAAGATCTAATATTTTCCAGGGGT GAATTTTTAGCTTTTCTTCATGTTAGCCAATCTGGGGAGTCTTCATATAT ATACCATTGGAAAGCTATCTTAATCTTGAGTTTGGAATATCCCCAAGATT GGTGAACAATCATTTTTTGTCACTTACTACTTTTTTCTTTGATCTTTTAC TGTTTTCTTTTGTTGCATCATCTATTTATCCTATATACTTTTTGATTTGA TATTTATTTCATTTAATGAATGCTGTTTTGCTGTTGCAACTGGTTACAAT CATAGTTTGATTTTCTTGATCTGACTTGATGAATTATGTTCTGTCTTTAT AGAATTGACCGCAATGGGGATCAGAGCATTGACTGCAACGAATTACAAAC AGCTCTCAAAAATGGTTTGTTTTTTACACCCCTCAAATTTCTTTTTCTTT GTACATTTTTAATTTTCAAAGGGTCCTGTATTTACTGAATGAAGAATCTA GTTATATTTTGTATCACTTTTTGAAGGCTGCAATTAGTTCTTTACAATTA GAATTAGTGGTGAGGTGGATGTAGAAAGATTGAAAGAGCAAAACATTGGT TAACAGAAGCTGCTTTTTGCTTATTTTGGACGTTTTGGCCTCAACAGAGT ACCATCATCATCACTATCATCAGTAAAGAACATTTTCATTTTCATTCGAA ACGTCTAAACAAAATTTCAAAATGAACCAAAAGCAGCTTCTGTTATTCAA CCTATTGCTTAAGATGTATGGAAGGATTCATTTATTTAAAACATTGGTTA CAAATACTGCACAAATTTAAATGATGATATTTTTTTATCTAGGCTCATGG GCGCCATTCAATTTGGAAACAACAAGACTTATGATAGGTAACATGATCAT TTTTCAACTGTGTAATCATTTTTTAGTTCCATTTACAATGGGAACCCAAT TGTACAAAAGAGTGGTATATATAAAAATATATATAAAAAGAAGTCACTGA GGTATTACCGACTTTAACTTTCATTTCTTAGGTATGTTTGACTTTAACAA CAATGGAACGATCGATTTCAATGAGTTTTGTTCTCTGTGGCAATACGTTA CAGATTGGACGCGAACTTTCAAAGGGTATGACCTGGATGGGAACGGAACA ATCGACCACAAAGAACTTTCACAAGGTTTCACTTATTAATACCGAAGCGC GATTTATTTCAGAAAGAAAAAGTAAATTTGATTAACTAAGGAGCAAATAA CTTCGTGATTATTTCTTGAATAATTCAAGAACTTCTTTGAAGTCTTTTTC AACTTTCTCTGTGTAATCGAAAAATACCATTTTTCATAAGAGAGGTTATA TGAGAATTTAACGTTAATGGTAGATTATTATACATCTCGTTTTTCTTTTT CAGCTATGCATGGATTTGGTAAGTGAATCTTTCATCACAATTTCAATGCA GCCATAAGTTCTTTAGATGTCCAGACTAAATTCCCTTTCGATGCGATCCT CAAAAAAATATGAAAATAATACAATGCTTTTGAAAATAATTTGGTAATTA TCTATAAGTTTGACTAGGAAAAACCTAGTCTGAATTTTGANATCCATAAA CTCTTCAGATGTCCAGACTACATTTCCTTTCGATCCTCCTTGAAAAATAT GAAAATAATACAATGCTTTTGAAAATAATTTGGTAATTATCTATAAGTTT GACTAGTTTGAATTTTGCACCTCTTTTGGACCTTTTGAAATATTTATCTA ATTGACTTGAAATTTTGTGCACCAAACATGAATTGGAAACATTGAAGAAA ATTTCAGCATCATTGACGTCGTGATTTTTTGAAAATACCGAAAATAGGAC CCCCTATCTAACTTTTTTTCACTTTAATTTGTTTGCTCAAAATTTTGTGA GGCAACTCCACGCGACATTCATTTTTGGGGCATAGGATCAATTTTTAGCC ACATGTTGGTATTGTGTATTTTACAGACACCGGCCTAAAATTGCCCTTTT TGCCTAAATCAACCCTAGGTTACAATGTAAAAATACAAACTTGCAGACAA AATTTCAGCAAAATCGGACGAGCAGTTATGCTGAAAGTGAGCATTTTCAC TTACGTTATTAATTTTGCGCACTGACTTAAATGGTCAATATCTATCACTG GTGAAAATTTCAAGTCAAAAGCTCCAGTAGTTCCTGAGTTCCGACAGGTT GTCAATGTGTATTTAAAAAAACGGTCTTCAAAGTACTAAATATTCATGGG AAGAAAATCTTTCTGTTACTAGCTTCTTTAATTTGACAAATCAGCCTTCA GGAAGAAATTTCAGTCAAATCGAACGAGTCGATCAGTAAATACATTCTGG TCTGTAAAATACCAACCAGACAGGTGGCCGAACCAAATTTTTGTCAATCA TCTTTGATTAACCATATTTACCACTGGTCAAACGTTTAAGGTCATAGCAC TTGTCAATCCTGAGATTTTAAGGGGGCCTCGAGTCCCTCCCCCAAAGATG CTTCCCCTAGTAAAGAAAATAGAAAGATGCTCGAAGTGTTGTGATAATTG AATATTTTTTCTTAGGTTTTCGCGTTTCTGAAAGAATTATCAGCATATTG ATTCGTAGATTTGATCGGACGGGTCAGGGACAAGTTCGTTTTGATGATTT CATTCAATTGTGCATTATCGTGAGGGTGAGTTATTTCTTTTTCTATTTCT TTGTTTATCGATTCAGTTCCAACAAAACTAGTGTCTTGTTGATACGAATT TTAATATACGTACGTACGTTCGTTAAAAATTCAATACATTTCAATCTACT AATCTAATTTGCTTTTGCTACATGTTTTTTATAAGCAAGTGTATGCCCCT TGGTCAGGCTCGTGTATGCTTAAGTTCTCAAAGCATCCAGGCGTAGCTTA TGCTTATTATATGCTTATGAATCATGCTTATGATTCACCTCGAGCCAAGT TTTTAGTGAAATTTCAGAAATTTTTGTAAAAATTTGTTCAGATTTTGGGA GCAGTGAAATGTAGGAAACCGTGGAAAGTCCTTTTTTTACTTGACTCTCC TACCAAACCTTTTTAAACAGATAAACAGTGTTCAAAGTTTTTCCGTCTCT GACGGATTTCCGTCTCAGCGAGGTACAAAAAGAGGTTTTCCCGTCTCCAG ATTCAACAAAATTTCCGTAAAACATGAAGAAACTGGCCAGATTTGTTGTT TGAAGTCTATTTCCGTCTGTGATGAAAACTTTGCTTTGACCACTGGATAA AAATGACAACTGGAAAAATATTGCAGACTGACGTATAAGCTTATGTTCTG TTTAGGAATTCTGCAAATCTGAGCCTTCATATGCTTAAAAGCGTTATGCT TATAAAATCCATTAAAACTGAGAGAGGATTAGTTAGCGTTTTCAAGTTAA AATAAATTTCTTTGCGAGGAGGTTACATCATGACAAATAGGCTCGTGGGT CAAACTTGATTGTCAGGATGTTTTTTCGTCTAGAGGTTAATATTTTTCGC CCGGGGAGTCAAAGTTCCTTGTCTGAGGAGTCTAAATTCTTTTCTTGAGA AGTCTTAACTACTGGAAAATGTCGCACCCCCTATGTAGTTTTTTTTCTAT TTTCAGATGCTGACGAATTCGTTCCAACGTTTCGACTATCAACGTAACGG AAATATTCAAGTTTCTTACGAACAGTTCTTAACAATGGTCTTCCAAACTA AAGCCGCTACTTCTAAGTAAACATTTCATGTCAAATTTTTTTAGGGATTT CAACTTGTAAAAGGGATAAGAAAGATAGTTTCTAATTCGAAGCTCTATTA TTCGAATCTTTCTGTAATTCGAATTAAAATACCTCTACGTCCTCTACTGA AAGGTGGTTTAAATACTCTCTGTAACTCGAATCCTTCTCTAATTCGAAGA AAAATTTTGGCCCCTTGAAGATCGAATTCGGGAGGGAAGTGATTTCATAG ATGTAAGCGATGATATAAGGGGTGGTGATATTTTAGATTCTGAAAAAGAA TAGAAAATCGAATTTTCAATTTAGATTTTGTGAAATAAGCTCAGAGCGTA ATTGTAATAAGGGTGTCTATTGCGGAAAATACCTTAGGATTAAAAGTTAG ATTTTCATTATTTATCCCAAAGTTGTCAGACAGTACTTTAGGCGTACAAA CTTTCGCGAAATTTACGGTATTTACTTTCGCGAAATCTTTTTCGCGATTA TCAACACGAATCAAGACAGGAAATGAAAGAGCTGAACATTTCACATGAAA AAAATGCTTAGAGGGAAAAATACTTCTTGAATTGGATTGAAACTTTTTTA ACTACTTTTGAGGTTTTAACAGGCTAAAGTGTCATAAATCTTACATTTAA CCTTAAGTTAGAAGTTTTACAGATTTTCTATTTTGTCAAGAATTTTTCGC GAGCATAAACTTTCATGAATGGCCCCTTCAAGAATCTCTAAAGACATTTA CTTTCGCGAGAAGGGCTAAAATTCGTGAAAATCGCAAAGGTTTTTGCTCG CAAAAGTTTGTACGCCTAAAGTAGTCGAAAAAATATTTTAGAACTCGATA ACTCCCATAACTGGAATGCCTTCACACCTTGTAGAAGTTTTCTGGTCCAT TCGGGTATCAAAACCTTATAAACAAATCTCTATAACTCGAATGTTCCAAA TTCTTGTTCGAGTTATGGAGACTTCACCGTACTTTTAACGATAGTAACCG AGTTTCATTTATTTCATGGGAGTTTCAGATTTTTTTACATCTTATTTTTG TATACAATTTTTTGTAAATATCTTTAAATCTTTACTGCATTATACAATAT TAAAATAGAATACATTACATTACATTTAGCAGTCAAAATGCCTCGCCCAT TATATTTTAAACCATAAAACTACCAAGTTTTTATCGCAAAAAGTTTTCAG GAACTCCTTCTATACATCTATTGGTCACTCTCAGTGAAAGGTGATGTTGT GTGCAGGGTTGCCATGGCGATCGGCGCATTTTGACAAACAATAATCGTGA TCCTTTCTATCAAAATGGCCGTCAGCGAACCAATGAACGCCTTCATAATA AACTTTCGCAGCAGTGTGGCATTGTCCTTGTTGACTTGCAATCTCCCGCC ACCAGTCAGTCATTACCTGAAGAAGGGAGCGCTTGATACGCCCTCTTTGT AACACGTGGTCGCATGTCAAAACCATGTTTTTATAGAAGGCTTCATCACA TTGTTGACGTGTCCAGTTGTAATGATATCCCTATTAGATTAGATAAGTTT CAAATTTACAAAGTTGATTCTGTTATTATTGAGATGGCAAGATTCATTTA CTTCTTTGAGCATAGGGGAGCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021375TCONS_00021375Clytia hemisphaericatranscript
TCONS_00021374TCONS_00021374Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021374-proteinTCONS_00021374-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:226420..234592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.26 10.19 8.33 8.86 5.07 4.18 8.27 8.53 7.32 6.28 9.66 7.02 10.74 8.87 9.94 13.08 8.67 8.31 7.73 9.89 7.85 8.33 5.25 7.44 8.38 8.75 8.14 6.11 6.77 6.35