XLOC_012245 (gene) - C. hemisphaerica

Overview
NameXLOC_012245
Unique NameXLOC_012245
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000395:8200..17779-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012245 ID=XLOC_012245|Name=XLOC_012245|organism=Clytia hemisphaerica|type=gene|length=9580bp|location=Sequence derived from alignment at sc0000395:8200..17779- (Clytia hemisphaerica)
TGGGTCTCATACATATTTCATATTCTATTGTTTAATCGACAATATTTGCT
GAAAAGGGCAAGAATTGCCATTTTTACCTAATAGACCCCACTGTTTCCGT
TCAGGTTCGCACTTCAAAGGAAAATTAAAAAAAAAACCGTGTATATTTAT
CATCCTGATCACATCACCAAAATCACATTTGTTCACAATGAGTGAGAATA
ATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAAGCTTTTTACTCGA
CAGGTAAGTCAATTGTTCTACAATGCCTTTTAGACAATGTATTTTGTATT
TATTTATTTTAGCCTAACTCGTCAGTCAGACTTATTTTAGTACTAAGAAC
TTCGTATAAGTAACCCTAAATAACGAATTTTCGGCAGCCGGTTTGGCCTA
GTGGATAGGGCATTGGTTTCGAAACCTATAGGTTCCCGGTTCGAGACCCC
CTTTGGTCACTATTCAACTTGAAAAAAATTCTAAGTCCAGCCGGATGCAT
CTGAAGCTTCAGCCGAATGTCTTTGATAGGTACTGTACCATTAGTTAGGC
GACAACAAAAGTTGGACCCCTCCAATGGACCCCCAAAATGGACCCCAAAA
TGGATTCCCAAATGGAACCCAAAATGGATTCCCAAAAATGGAACCGGCTG
GTTCGGGCTTAGAGGTAATTCCCTCTGTTGAGGATGGAATGATTTAAAAA
TTAGAAATACAAAAAAAAACGTAAATTTAAACCAGACGGTGTCAATCAAA
CACCTTCGAACAAAAATTGCAAATCGAACCACTCGAACGTAATTGATCGA
ATAAATGCGATTCGATTGTTGAACGTAATAGAATCTCAATCGAACGGCCG
ATTCCTGGGTAATATTTGATTGTGTTCGATTGCGTTTGACAGTATATAGT
CATCTGGGGTAAAAACGGGACGAAATCGACGAACCTTTCCATATCTCAGG
AACTTCAAAAGCTACAATCATGATTTTTGGCCAGCAACTCCCTCTAATGG
TCATCTATCAACCCTCTTAATGGTTTAAACTTATGACTTTTAGTTTTCGC
AAAATATTCACGGATATGCGTCCCGTAAATACCCCGGATTTTGGGGTAAA
AACGGGACACCCCAGGGTAAAAACGGGACACCCCAGGGTAAAAACGGGAC
ACCAACATAGAAAAATTTTCACTGGTTAAATACGGGACACCTTTTTTTCA
AAAACGGCACCCTGTACAAACTTGCGACTTTGGGCAGGTCAAAATAGGGT
TGTTTACTAGTCTCTATGACCCAAACATGTAGCGCCTGCATTTAGTACGG
CGTTTATTCTAAGTCGAGAAAAAAGCGTTCTAGAAATGAAAAATCAACGT
TTCAACCACCAAGAAACATCGTGGTGTATTCTGATGTAGAGGAATGAAGC
TGATCAAAGTATGGATTTTCATTCTTCATTCTTTTCATTTTTCATTTTTC
ATTCTCAATTTCAAGCCAAGATATCTTAGCAACGGGGTGCTCGCTCATAG
TTACAGGGGTTTGTGCAAAAAACTAAACATAGAAAAGTTTCCAAATCCCC
CATTTCAATTTTAAATGCAGTGAAAAACGGTTTGTGTAAAACGCAGGTCA
CAGGTCACAGGTCGTAGGTCACAGGTCACAGGTCAGTGATGACAGGTTAA
CTCTAATCAATGTCATTGCAGAGGAAAATGTTTGGAAAACACAAAGAATC
ATCAAAACATAATTCTCAAGCAATTTCATCCATATATATAAAACCATTTC
AAACATCAAAATTTAACCATGTGCTTTTATCGATCTTTCGCAGTTTGCGC
CGTGTATAACGCAGACCAGAAAATATTTGACACTATATTATACGTGTAAC
AGGTATATTACATATTGTAATGTTATATGATGGTTACATATAATAAAACA
AATCTTCTGATTGGTGTAATTTTATATCCAGCCATATTGTTATAATCACA
TTCGGCATGCTGAATATTTTTGGTGCTTTTCTCTTGTAAGACATGATATT
TTGTAATTCTGTCAATATTTTTGTCAAAAATTGTCATTAAGTCATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAG
AGACCAATTTCGTTTTTGTTGCAGATTTCGATATAAACTTAACTCAGGGA
TTACTTGTCAATGTGCATGTGCACAATGTGTTGTGTCAACTTGTCAGCAT
TGTATTGTTGTAAAGGGAAAATAAAAGAGGTAAGACTAGCCTAGTCTCTA
ATCCTGACATAGGAGTTTAAGTTTAGACTGTTTGAGTAAGGTTAGATTGG
TTCGATTGATAGTTGACTATATTCGATTGGTTCGATTGATTGTCAATTAC
ATTCGATTAATCTTCAATTTCGTTCTATTATGATTATATGTTCGATGAGT
TTGATTGCGATTAAATTAAATTGGATCACTTCGTTTAGAGCTTTTTAGCG
TGAACGGCCGAGCGCTACATAATCAAATACAATCAAACATAATCAAAGCA
ATCGAACAGCAAATCCTGGGTAATATTTAATTGCGATAATCATGGTAGTG
AGATAGATTAGTTTAAAGTGCGGTCCAAATTGGGACAAAAAATGATCGTA
AAGCAAAGAACTAAGAATTGTCTTGTGGTTATAACTCTTGACTGCTTGCT
CTAGCGGGCTGAAAATTTACACAATCGTCCAGCAAGGCAGGGTGATGTGA
TATTCCTAAGAAACAGAATTAAAAGGGTCCTTAAAATGACAATACATTGT
CCTGTAACACAAAAAGTATGGACAACATAATGCCTATTATGGGACAAAGT
AAAATAAAAGAATTGGAAAATTTCTGACTTCACACTTGATTTTTCTGATT
TTTTGCTCAATGATGCAAAATGGTAACTAAATCCCAAATGTTGGGTAAAT
TTCTTGTTTTTAATTTGTTCAAAAACTAATATCAAAACTAATATCAAAAA
TGTGAAAAGTGAATTATTTTGAATTTTTTTTATTGAAATGTCAGACATAG
TGTGAACCCCCCTTTTTTAAGTGGGGAATCCAACTTTTCAAGAAAGGCTT
TATAGGGGGATAAGAGATTTTCCGAGTAAAATGAGGGGTTTGAGTTTTTA
GGGGGTATTGAATAAAAATAGGGGGATAACAACTTTTTGGTAAAAATATG
TATTATATCTTAAATTGGTCAAAGAATTGGGTATAGTCCAACAAGATAGC
AATGTAAATGAGATCATGTATTTTATAATTTTTTCGCTGCTAATTTTCAA
AGTCAAAATGGTATTGCATCCTTCATCATTTCATTATAGACCGTGGCCAA
GGGCTCACAATATTTCACTTTTCTCAAAATGTAATAAACTTGTGATATGT
TTCTTACTCAAATTGAAGGTTAAAAAGACTGGCAAGCAATAAAAGAAAAA
AGATTAGTGTGAATATCTGACGTAAATTAAAATTTATGATCCAGACAGTT
TGCTGGTCCTATAAGAGGCACTTTTCCAGGCATGAGCATTTTGAATAAAT
GTTGTAAAAATTCTTATTTTAGATTAATGGTTCATTCAAATTGAAGAAGA
AATTTCATAAACACCGTCTTTTTGAAAAATGCCCCAATCGTCTTCAGATT
CCACTGAAAAATATATTTGATGCCAAAACTTTCATGAAAGGGTAAGGTTT
TTGTATGTAATTGACCAAGGCCTAATTGAGAGCAGGCTTTCCTGGACATT
TCATTATATTATAATACAGTATTTCTAGATTCAAAGTTGAGCCAAAAGTA
GATGATATGTATCTGACTATTGTTAATCTCGTATTGTCATATGTGACTCC
CCAAGCGATTTTAAGTGCCTATGAAAAGACTGGTCCAGACTGATCAGCCG
AAATACAGTAAAAAACCCTTCCTTCTTTCTTTGTCTTCATTTTGTACTCA
ATCTATTCTGTCTTTAAAAATCTTTTTTTTTTAACAAAAAGACTCCCTGT
CCCCTGCTTGTATTTCCCTCGCAAAAAAGACACCCCCTGACTTAGTTTAG
CCTCTTCTATAATTGTTTCTCCTTCCTGACTAAGCACATACCCCTGTCTC
ACTTTGATCTCCATGAGCTGATCCAACTTTGATTTCCTTGTAGCGAAAAG
ACACCCCTGTCTCTCTTTGACCTTATTCTGATATTCTAGATATTCTGTGT
CCTTGGAAACTATAAGTTACCCCAACCTCAATTTGACCCGTCTGTTTGAC
CCTCTTCTGTTTTACAAACTCTGTTCTTTATTTCATATACCGTTTGTTTA
CGGCCTTCTATTATTATAACCGAAACAATATACAATAAAAATTAATTATC
TTACCTTTCTTCTTTATCTTTGATGAAAGTTGTAAGTCTTTTTTTCTCAT
CATAGTAAATTAATCTCACTTTGCAGCTAACAAACTGGTTTTCTAAAAGT
CCCACTAGAGTCCCACTTTATAACTGTTAAGTGAAGGGAAAAAGAGTGAA
AAAATATGAGCACTAGATTTGGTTTCTTGAGACATTACAACATATAAGTA
GTGGAAAACCTGAATTTCGGCTCTGGGATTTAAAGGGGTTATTCCATTGG
AAGAAAGTGGAAGAGTTAAATTTCTTTGGACTTATCTTTTCAGGCATATT
GCTATTGGATTCACTGAGGATGGAAGATATTTGTTGACTTATGTTTCTAA
CATTAAGTTTCAATTATCAGACACTTCTGTTTGCTCTTATCAATATGTCC
TGCATTGGTGGAAATTTGATCTTTGGAATAAACTACAAAAGGTAAGGACT
TCATTGATATTTATTCGTAGAATCATTTTTGGACCTACCTCGAAGGTCCT
TTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAACTTT
CGCGAGGACGAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTA
ACGGAAAAACATTTTTCGCAAGCATAAACTTTCGCGAATCAGGACGTAAA
ATTGAGAATTTTCACATGAAAAATGGCTTACAGGGTCAAATACTTCTTGG
ATTGGCTTGAAACATTATTTGTCCTTTGACTTTTTAGTCTTTTAGCAGGC
TAAAAAGTGCCATAAAAGTAAGTTACATTTTATTCAAAGTTTTACAGATT
TTCTATTTTGTCAAGAATTTTTCGCGAGGATAAACTTTCGCGAATGGCCC
TTATTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAGAATGCG
CAAAAATCGCGAAAGTTTCTGCTAGCGAAAGTTTGTACTTCCTTTTCTAT
TTCCATTCTTTATTTATCATTAGGTAGGTCCAATATGCATTACCAGATTG
TGCTTGTTTTTTTTTGAAGTATTCTCTTTTTCTTTTTGGACCTACCCCGG
TGGGGTAGAGGTCCTATAAATTAATCAATGTCCGTTCGTTCGTCCGTTCG
TTCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTCT
GATTTTTCATTTTAAACCTTCACTTTCGAATCAACTTTTCTTTCTATTTG
ATAATATTCTAATTCAACTCTTGAATATATTTTCAACATGCACAAAACCA
CTGTCTAATTCAATCAAAAGTTACACCTTTTCCCCCCCCNAACATGCACC
AAACCACTGTCTAATTCAATCAAAAGTTACACCTTCCCCCCCCCCTACAG
ATTATTCGGAGAGAGATTTTAAGACAAATTTTTGCAGTTTTTAAAGTCTT
TTGCTCCTGCTTTTTGTTTCAGGTATATGAAGTTGAATTATTTGCAAAGG
AAACAATTTCAAACGTCAGGATTCTGCGACTGATTATATTGTGGTTCATG
CATCTCTTGTCAAGTAACGACTCCTTTTCTCCGACAGACTTTGCAATTAA
AAACCATAGATCAACGATTATAGTTGTTATAAAGTTTCTGTATTACTCCA
GGCTATTTCTCTAACTAAACACTTAATTTTTTACATATCGTAAACGCCCC
GGGTGTTCATTAAATTTTTTGGATTTTTGGGGTGTTTAAAAGAAGGGGGC
GTTTATTTGATAAGTTATGAACAAGGTCACTTTAGTAACGTGTATTGGAA
CCTCATTTTTCCTTTCTATTATTATTTGAATATAAATATGTCAATTTAGG
GATGTAGAAATGGGTCAAAACCAGGTCGAATACAAAAAGAGTATAATTAT
TGTTGTATATCTAAGTTTTCTTCATATTATACTTCCTTACTGCTACCTGT
TTCAAATAAATGCCCCTCCTAGGGGGGGGGGCGTGGCGTTTATTTGAAGG
TGAGGGGGCGTTCATTGAAAATTTTTCCTTAAAGGAGGTGCGTTTATTCG
AGGGGGCGTTTATTCTAAGTGAAACGGTATATTATTATCCTTTTTCAGTA
CGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATCAATCGTCCCTAAA
TATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCATTTCAAATA
TGAACTGTTACCACCTCATCCACCATTTCTGACCACTATATCTTTGAAAA
GAAAGAATGTTATACTTTTAAATTCTGGAGATATGTTGTTTGCCATTCTG
ATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAGGAAAGGATATACA
GACAAGATTGTGTTACTGCCAGCAACGCCAACAAGACGTGCTTGCAAACC
AAAGCAACATAGATGTCAATTATGACGACTCGACTGATTATATTTCATTC
ATAAATCAAGGATTTAATACAATAAATGATAACGATTCGCAAACATCCCT
TCCTGACTCTCCTTTTGATTGTATGACAACTGTAATACCATGTGCAATTA
CTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTATGAACACAGATGC
TTTCGACATGCTGATAAAGGTTAGGCTCATTGAGTTTAGATTCTATAGAT
GTATTTATGCTTTTATATTTTTGTTGTTTTCTACCCTGCACCATATATGG
CTAGGTACTAAAATGACTCTTTAGAAGGTCCAGTGTGATAGTGGTCAAGT
GGTAGCATGCTTGAATACTTGCTGTCGATCAGTCAGTGATGGTAAACATC
TGTCACAGGTCAGTAAATGTTATGTTAAGGTAACTACAATACAATATCTC
TCCAATAAAACAATGAACAATATCTCTCCAATAAAACAATGAACAGTATT
TATTCAATAACACAAGTAACGTTAACTATAAAACAATAAAACAATGTACA
ATTTCACTTGTATAATTCCAAGCTCCTCCACAACCATTATTTTGTTAGTT
ATTGGTAGTCTAAAGGTAAAAGTATCACTATGGATTCTTGAGATTAATGA
TTTTTTTTTTTACCTTTTTCAAATCGTATACCCTTCTTGGGAATGTCCTG
AAAACTTCAGGGTCATTGCATAAGTATTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021820TCONS_00021820Clytia hemisphaericatranscript
TCONS_00021819TCONS_00021819Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021820-proteinTCONS_00021820-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000395supercontigsc0000395:8200..17779 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.32	23.38	12.26	9.3	6.35	3.55	2.71	2.98	1.52	1.41	1.92	1.07	0.56	0.75	1.47	1.11	2.88	2.29	0.44	0.93	2.8	3.64	10.28	9.32	1.94	3.05	1.99	1.47	4.25	4.61