XLOC_012253 (gene) - C. hemisphaerica

Overview
NameXLOC_012253
Unique NameXLOC_012253
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000395:187751..193253-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012253 ID=XLOC_012253|Name=XLOC_012253|organism=Clytia hemisphaerica|type=gene|length=5503bp|location=Sequence derived from alignment at sc0000395:187751..193253- (Clytia hemisphaerica)
AGATTTTTGAATTGATAAATATCAAAATAACATCAATATGCTTGGAGATG
AAGACGAGACATCAAGTTTACAAGAAGAGGAAATGCTTCGAGGTGGAGGG
GACTTAGATACACATTCTGATCTTGATAGAAACTCGACCAACCTTTTACT
GAGAGCGAAACAGTTTTCAACCGATTCTATGGCAAGTTATGGATCCATAA
ACAGCGCGCATTATGATAATATTAAACCTGGATTAAAACCTGGTGTCTCT
TTTGACAGTATCAGCGATAACAAAATCGCTAATATAAAGAAGATGTTTTT
CGGACGGCGAGTTGACTCTTTAACCGAACCAGGCGAGTTTGAGGACGACC
ATTTAATAACTCGCCAGGATAAAGCAAACTGCACGCTCATACTTTTCGCT
TTGAAACATTCAATGAAAATATTTCTTGTTACTTCGCCTACCATTTTGAT
TGCATGCTGTTTTGTGATTGGATTGAGTTATATACCATGGACGGACGTAC
CTTCATGCAATAACAACGCAACACAGCCATGTACGCACTACCGAAAAGAG
TATTTGGTCTACTTCAACACCTATCTCAGATTGGTAAGAAACATTTACTA
AGCCTCTAAGCAATAAAGTGAAAAGGCAAACCTCGTGTGCAGGGTTTGAT
TTCAAGATGACAATTTTTCGCTTTAAGCCATTTGACTTTATAATTCATTC
CCTATAAGCCCTGGTATTACAAGAAGAAACATCCACTCCCCGTCATTCGT
TCCTGTGAACATAATTCCCGAATTCATCATCATTCTTAAAATTGACCTTT
TTCTCTTACGAGTGAAAAACCTTTCTACTTATCGATACTTATCTTATGAT
ATGATAGTGGACGAAACTACATTCAACACTCTTTAGCTCGACGTTCTACT
ATACGACACGCCCCATTCATCATTCGATATTATTGAAAGTCACCGTCTAT
AAGAAACTCTCACTAGCGACGCTCTACTATTCGATATGGAATTCCAATTA
TCCTTAGAAATCGAATAAGAGAGCGGCAAGTGTATACAAAGAACCTGTCA
ATGGGCTCCTCCAGAAAAAAACTTGAATATGGGGGGGGTGGATGATATAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTCTAATTTCAGATTTTT
GAATTGATAAATATCAAAATAACATCAATATGCTTGGAGATGAAGACGAG
ACATCAAGTTTACAAGAAGAGGAAATGCTTCGAGGTGGAGGGGACTTAGA
TACACATTCTGATCTTGATAGAAACTCGACCAACCTTTTACTGAGAGCGA
AACAGTTTTCAACCGATTCTATGGCAAGTTATGGATCCATAAACAGCGCG
CATTATGATAATATTAAACCTGGATTAAAACCTGGTGTCTCTTTTGACAG
TATCAGCGATAACAAAATCGCTAATATAAAGAAGATGTTTTTCGGACGGC
GAGTTGACTCTTTAACCGAACCAGGCGAGTTTGAGGACGACCATTTAATA
ACTCGCCAGGATAAAGCAAACTGCACGCTCATACTTTTCGCTTTGAAACA
TTCAATGAAAATATTTCTTGTTACTTCGCCTACCATTTTGATTGCATGCT
GTTTTGTGATTGGATTGAGTTATATACCATGGACGGACGTACCTTCATGC
AATAACAACGCAACACAGCCATGTACGCACTACCGAAAAGAGTATTTGGT
CTACTTCAACACCTATCTCAGATTGGTAAGAAACATTTACTAAGCCTCTA
AGCAATAAAGTGAAAAGGCAAACCTCGTGTGCAGGGTTTGATTTCAAGAT
GACAATTTTTCGCTTTAAGCCATTTGACTTTATAATTCATTCCCTATAAG
CCCTGGTATTACAAGAAGAAACATCCACTCCCCGTCATTCGTTCCTGTGA
ACATAATTCCCGAATTCATCATCATTCTTAAAATTGACCTTTTTCTCTTA
CGAGTGAAAAACCTTTCTACTTATCGATACTTATCTTATGATATGATAGT
GGACGAAACTACATTCAACACTCTTTAGCTCGACGTTCTACTATACGACA
CGCCCCATTCATCATTCGATATTATTGAAAGTCACCGTCTATAAGAAACT
CTCACTAGCGACGCTCTACTATTCGATATGGAATTCCAATTATCCTTAGA
AATCGAATAAGAGAGCGGCAAGTGTATACAAAGAACCTGTCAATGGGCTC
CTCCAGAAAAAAACTTGAATATGGGGGGGGTGGATGATATAACATTTTTA
GGAAATTTCCCCCCCCCCCCGGACATTGATAATTTTGACCCCCGGACGGA
TCTCGCCCCCGGACAAGCATCAGTTGACTCCCCACATTCAAAATCACCCC
TAATCACAGCAAAATTTACAGATTTTTCACTCCCCTCCCCTCGACAACAT
ATCCAATATATCCTCCACCCATAGATTTATAAAGCCTGAAGGGCTAGATG
GAGTGCTTTAAGCTCTTCCAAGCAAAAAAAAAGTGAATATCGAAAAAAAT
ATTGCTGCTATTGTTTTCGAAAACCCTAAATTCTATTGTAATGTCACGTA
ACTTAGGTAGGATTTCCTACCTAACCTACCTCCTTCCTACCTACCTAACC
TCGGCACAATTTTCAGCAAAAGCACGATATCTAGCCCTTCGGGCTTTATA
AATCTATGCCTCCACCCTCATGTACAAAAACTTTCTGGAAGAGCTCAATC
CTGAAAAATATTTCTCTTTTTCATTTCTTTTCAGATTCTCCTCTCAACCA
CTTCCGTCTTCATCACCAATATCGCTTTAGACGGCAGCCGACAAATTTTC
AAAAACATTCTCTACGTCAGCATCCCACTTACNCCCTAATCACAGCAAAA
TTTACAGATTTTTCACTCCCCTCCCCTCGACAACATATCCAATATATCCT
CCACCCATAGATTTATAAAGCCTGAAGGGCTAGATGGAGTGCTTTAAGCT
CTTCCAAGCAAAAAAAAAGTGAATATCGAAAAAAATATTGCTGCTATTGT
TTTCGAAAACCCTAAATTCTATTGTAATGTCACGTAACTTAGGTAGGATT
TCCTACCTAACCTACCTCCTTCCTACCTACCTAACCTCGGCACAATTTTC
AGCAAAAGCACGATATCTAGCCCTTCGGGCTTTATAAATCTATGCCTCCA
CCCTCATGTACAAAAACTTTCTGGAAGAGCTCAATCCTGAAAAATATTTC
TCTTTTTCATTTCTTTTCAGATTCTCCTCTCAACCACTTCCGTCTTTATC
ACCAATATCGCTTTAGACGGCAGCCGACAAATTTTCAAAAACATTCTCTA
CGTGAGCATCCCACTTGTCACCATAGCGACAGCTTTAATACCAGGCCTCT
TGAAATACAATGACGTCATACTATACTATTACGTAGACATTTTCTTATGT
GGATTGTTCTTTTTGGTTGGGATGGTGGCTTCGGTTTTTTGTTTATCGAA
AAATTTAGAAGTTCAAATCACAAGGAAACGAATTTTTCAAGTTTTGGTAA
TTCCGAGTATAATCGCTGTACTTGGTGTGAATGTTCTAGACGCAGTTGTC
AATAAAGAATATCAAATATTTTCAAAGGGTTCCATTGGTCAATACGTGGT
TAGGCTTGTTATTTATCCGATCACAGTCGACATACTATTGGCTATCACTG
AAACGAACGTTCAAAAAATCCCCTCCAATCACATCAATAATCCTAGCCAC
GTGGTTTATTTCTATCAAGTCGCTTTCACCATTATTGGTCGTTACATGAC
AACTATATCAGGAGGCATTATGGATATTTTCATAATGGCAGCCTCAGTAG
CGGGAAAGGATTTCATTCTACATCGAATGGGTCGTATCCGATGTTGGTTG
GCATTTCATACACGAACACTCCTAGTAAAATTCTATCCACCTTATGCAAA
TACAGTTGATTATGAGACTTTCAAAGACTGGTTTTACTCTAAAGATTTCA
CATACTTCAAAGCGAATACGTTAAACAGTGACTTTGCAGTTGAACTAACA
GGTGAGTAATGATCCTTCAAAGATCTCATAACTTGTTCTGATAGAACTTA
GACTGAAATTTGTGTGACGTCAGACAAGAACCTTTGTAAAATTGTGGACT
GACAAAAAATGTGAGTAATTCTGCAGAAAACTCAAATGACAAGTTTTAGA
CACTCTATAATCCTTTTCAAAAATTAGTTCCATTACACTCGAATTTTCAT
GTCTTGCAAAAGAATGCATAGGAGTACATTCGCAAGACCTTAAGAAAATC
ACTTCAAAATGTATGAACCTTTCTTCCCAATACTAAGTTTTTTTGCTTTC
TCAAGCATTCCTCAGTTGGTTTTCAAAATGTATCTCGATATTTATTCCAG
GTGTTATCATCGTACCAGCCATCTTGGCAACCTCCAACAAACATTCCTCA
CTATATTCTTTCCAAGATAAAAGTTTCTTAAACTCTGATGGAACACACAA
CTACATTTACATCTTACAGCAAGAAGCAATTCAAATCAGCCTCGTTTTCA
TATCGATCATCATAGTGACCTACATTGAAGCCAAATTCAATCGAGTCAAC
CTCACAGCAGTGGTCAAACGAAAAAGTTACGCACAATACATTTCAGAGAC
ATTGATTTATTTATGGGGCATTTTGCTCTTTTTATCATCCGTTAAAACGA
CACCGAATTATTTACAGTGCGATGATATGACAGTGTGCAATTGTGATTGG
CAAATAGATGCTACAAAGTATGGGTGCTAAGAATATTTCTTCCTTTTCTT
CACGTACGAAATCAAGTTACAGACTATGCCAAAATACTCGGCACCAAATA
CATCTTCATTTTTTAATTCATGATATTCAACTCAAAAACATCTTTTCAAC
GAGCACAAAACTGCTATCTAATCCGTATTCTATCAGAATTTAAACCTATT
TTGTTGTCACTGCAGATTATATTGAGGCAGAATATACTATATCCCAATTC
CAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021835TCONS_00021835Clytia hemisphaericatranscript
TCONS_00021834TCONS_00021834Clytia hemisphaericatranscript
TCONS_00021833TCONS_00021833Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021835-proteinTCONS_00021835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000395supercontigsc0000395:187751..193253 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.72	0.75	0.52	0.44	4.89	3.4	7.62	7.94	4.32	3.19	4.29	3.94	4.15	4.06	4.68	4.78	1.23	1.3	3.23	1.26	0.3	0.26	0.6	0.58	0.67	0.15	0.38	0.56	0.1	0.09