XLOC_012306 (gene) - C. hemisphaerica

Overview


Name	XLOC_012306
Unique Name	XLOC_012306
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000400:135723..145446-

gene from alignment at sc0000400:135723..145446-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_012306 ID=XLOC_012306|Name=XLOC_012306|organism=Clytia hemisphaerica|type=gene|length=9724bp|location=Sequence derived from alignment at sc0000400:135723..145446- (Clytia hemisphaerica)
AGCANGTCTAGCAGAAATGTTCCAAAACTTGATTACAAGAGCTTTCATGT
AAGCTCCACTGCTAGTGAGCATGAAGCAATGGCTGCCTCCAGACGAAGGA
AGACTGGAGCAAATGTGTGGCAAGCAGAGGAAATACTTGCTGAGAAAAAG
GTGAGATTCTTTTTTTTAGTTTTCTTTCCACAGAAAAGGATTGTTTATAA
TAATTAAAAACTCGAATATGATCTTCAAATAAATGAACTTTTTTTTTTAG
GAAGTTTTAAAAACTTCTATTTTGCATATGTTTTTTTAACAAGTAGTTCT
AGACGAGACTTTATTATTTCATTGTGTAAATTCCTTCATATTTTTCTGAG
AAAAATTATCTTTTCTTAGAATTGAGAAAATTATCTTTTCTCAGAACTAG
ATAGTATTTTTTTCTCAGCTACTCTTTTTGTTTTGTTTCATTTCACTGTC
TTGTGCTTTTAAATTTGTCTGAATTTTTTCTGAGAATGCTTTTCTCTCTT
TTCGCAGTCAAAAATAGAAAGTCCTTCTCAGAAGAAAAATATTTTTCGAA
TGAAAGAGTGGTTCACCTCCTAGATTTTGTTCATTGAGAGACTTGTATCC
TAATATTTTCTATAGATTGGTCGACACACGAAGTATTTGATCAAATGGGC
TGGTTTTGGGACGGAAGATTGCACCTGGGAACCAAGAGAAAACCTTTTGG
ACGAAAGATTATTGTTGTAAGTATTAGAGTTATATTTTAAATTTTTATTT
TCTTCCTTGTGTCTTTCTAGACTTTATCTCAACCATTCCAACTATGCTAT
TTAAACGGTTTTACATTTATATTCCACCTCTCAGGTACTGGGAAGACCCT
CGAGCATTTCAAAGGAATGATATCAGGAGAGTATCCTTTTACAAAGAACG
GCTCCTCACCTGTTTTGAGTCTTGTCTCAAGGAGAGATTGAAAAGCACTC
GACACCTTGACTTCCCTGTTTTTATGTTTCGGTATTTTTTTCATGGGAAA
GGAGTTGCTTTAACGAGGGGGACCTGGTCTTTTCAAAAGAAAGACTTTAA
AAAAATCTTACCTCGTGGTTGGGACTGTTGTCTTATAAACAGTNGTCTTT
TCAAAAGAAAGACTTTGAAAAAATCTTACCTCGTGGTTGGGACTGTTGTC
TTATAAACAGTAGGGGAAGCCGTAGAGAAATATTATTTCCTGTAACAATA
CGTTGTTTTTTATCAAAGTCTCCTAAGGTTTTCTCTAAATCTGATGATGG
AACCATTTTGAGAAAGAAACAACGATTGTTACAAAGAATTACTATTTCTT
TCTTTAAAGAAACTATAAATAATTAATTTTATGATATAAATAAAATTTGT
AAATATTCATATGTACAGAATAAATAATGGAACGTTCGAAAATATTCGAA
AATATCCAAGTCATTCGAAAATTTAAATGTTCATTTTGGATTGATACAGA
CACATCACGATTCAAAGAAGACAGAAACATGGGGCACACATTTTTTTTGT
AAATAAGATTTGACAAGATCTAGAAGATTTGATTTGATTATGATTATGTC
TCACCAAGTTTCTAATCGTTATTTCAGAGCTGGTTGTGTGACGAAACAAC
GTTATCAGAACATTTTGTGATCGTATCTCAGAGGTAAATATTTACATAAA
ATAACTAATTATTCCTCATTTTTGTGGTATTTTCGCTTGGGTCTCTTATA
ACCATCTTCCTCCAACTCTGTCATGCGTTTGTCTACCCTGAGCATTGCCT
TGCATGCATCTTTCTTATTTATCTTTCTTTGGAAAATCTTTCTGATGTCA
TCATTTTTCTTCTCGACACCTAAAAATCAAAGGACTGAAAAAGTTAAATA
TGTCTTATGATAGAGTAAGGTTTGTTTGAAAAAATTAATATTTTGTATGT
GGAATCTGGAAGTGCTTACTGACCTTGACCAGAGAAGTACTTTAGTGTAC
CGTATTCGGTCAAGTATTCTGGTACATGTTTGATCAAAATGTGGATGTAC
GGTGTTATTTCTTGTCCCCAATCGTAACCACATACATTCATACGTCCTAG
GAACCGTCCCCATTGCTCTGCCTGAAGTGGAAAACGAAGAAGTTGATCAA
TTAGAAAGAACAAAGACAAATACTGAACGAAAAACAATTGTACGCCCAAG
GATTTACAGAAGGATAGTTGTTACAGGGTAAGAGAGCTCACTTTTTGTGA
AAATTCATCGATTTGTTCTGTCGTAAGGTTGATTTTGTTCATTTCTTTGT
ACAGCCATTCAAAGTCCTGAAAGTAGAACAGTGTAAGATTTTTGAGTAGT
GTAATTTGTTAAGAGCCATTTTTTTTAAAAATCTTCAGAATAAAGAAAGT
GTGATACATCACCCTCTTAGATTTTGATGAAATTTTGACCAAATGATCCA
TCACACAAGAAAATAAGACCATGAAAATTTCACCTTGATATCTCAAGTAG
TTTTGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATTTTCTTG
TGTGATGGATCATTTGGTCAAAATTTCATCAAAATCCAAGAGGATGAGGT
ATCACACCCTGAAGACTCTTAAAAAAAATGGCTCTTAAGAGGTTTAAGTA
GAAAATTTTGGTTCTCTATCAAATCTCCATGAAATATTTTGAATGTAATA
ACCACACCAAGAACAATTTTGAAAGATAATTTCATTAGCCTACCTGCCAT
AGCTTTCTTGTTGGCTCCACCTCACTTGGCTTTAGAAATTCATCAAACTT
TGATGGCAATTTAGCTAGCAGCCTTTTCTTGTCGTTGCCCATTAGTGATG
TCCATTCTAGTTTGTTCTTCTTATTTTCCCAAATTTTAAAGGAAACCCCA
CATTCTTGTATGCAACGAATCATTGCCTTTTGATGGACATCAGTTTTTTC
TTTCTGTAAAATTGATAAAGAAACCAGAGATATAAAATTTGAATTACCCT
TTTAAGAAAAGTATAATAAAAAACATACAAAAAAGTTGAGGTTGAGGGCT
TAAAAAGGCTAAAAAATACTTATAAGGTTGCTCGTATCCCTAGCAAAACT
TTGGAATGTCAAAATTCCCAGCCAAAAACATACAATGTAGGTTCAAGGTA
ATGCCAAGCAATTCCTTGAATTTTTGCCATATCTGAGCCTATATAAAAGA
ACATGTAGTTAATATTAACAGGACTATGATATACCTGGTCTCTGTCAATG
ACATTGTGAATCATCCCTTCTTCTAGCCGGTCTGTTATCCGCAAAAGGAG
ATGCAATTCGTCAATGACGTGGTCACAAACTGGCACTTCATGAAATAGCG
GAAAGTCTTGACATCCAGGATCCTTGTTCCACTTGGCATGGTGTTTTCGT
TTCTCAGCGTTGGTCTCAAACTTGTTTCTTGAAGTAAAAGGTAAAAATTA
TTTTTTTACTACAATAACTTAACTTAAATTTGCGTCCATGAAAGTACAAA
TCTCCAAAAAGAAAGGTTAAATTTTAAAATTCCCAGCTAACCTTTTTGAT
TTGTGAATTTTGCAATATATGCACGAATTATTTGATGTTGCTGCTTTCAT
ACCAAGACAGAGCAATAGAAACTGAAACAAAAAATTAAAAAATTTATGTA
TTTGTCATGAAAATATGTACATCACGATGAGTTTAATTAAAAGTTTTTAG
CTAAATTTAAAGCGTCCTTCTGTAACAAATTTTCAAAAAGTTATAGTCAA
GGCTTTATTTTTCTCCTTTACAGAAAGAATTGTTTACCTTCATATCACCA
CCAACGAGAACTTTGACTTTTTTCCTAGTGCCATTTAATTCAATTGACTT
TTCCTTTGCAATGGTGTTAACTGTTTTTGTGACATTCGACAAGGAGCTCT
TCACAGATTTGTAATTTTCATCTGTCTTTACGATTGACAACACCTTGTTT
CCTGACAAAATATACAAGAATTTTTTTTTTTTTACTACATTCTCTCGATG
AATGTCGTGATCAACCAATTAAGTCCAAGTAAGTACTAGTTTCCTACTAG
GTTCTATGTAAACATGACTTTCGTTTACTTACCAAAGCTGGATAGCTGTT
TTCCCATACCTACAAATACCGAGTAGGTGCAAACGACAATTGTTGTTGAA
CGTGAGATTTTAGTCCCATCAGCACTGATCTTGAGCTGAAAATGATTAAG
TGTTACATCAAAACCCGTTAATTTGTGGGACTTGTTTTAAACCTTTTTTG
TAAGTTGGTAGATTTGGGGGTTAAGTTTTATATGTACATACCGTAAACTC
ATTTTCTTTCAACCTTTGAATAAACGAATCTTTTGTCAGCGAATCCAACA
AATCTATCTCCGCACCAAGTTGACAAGGGGTATACATAATGTCAAATGAC
TCGTTCATTGTTCTATAATTGAGGTCAATAGTTAACAACAGAATAACAGA
ATCAAAATCAAACTTTCAGTGCACTTTCAAAGACAAAAACTAATTTTATC
AGATGATCAAATGTGAAATGTCTTCCAAAAAAGAGTTCCTGAAGATTTCC
GGTCTAGAGTAAATAATATAAAGGGTATTCTCTAGTTTTGAATTATACCT
TTGGAATTTTTCAACCAGGTAAGATCTTGGCAGGTCTGGAAACATTTGAC
TCAGCTCATGATATCCACTTAAAGAGATGCTGTGCTTATCCAGGATGTAC
TGTAAAGACTTCATCTTTGCTTCATAGTCTTCCTCTGAAATAAAATCATA
GATTTTATATAAGAAAAATCCTCATTCGTTAAATTATCTCCTTGATTGCT
TATTTATTTTATTTTCTAGGAATTTACAAACCTTCCACTGAGTAACCAAA
GCAGCCATCTGATGACGTACTTTCTTGGGATGAAGCATCGATCGAACTTT
GGGACGAATCTATGATATGAAATTTCTGGTTATGATTGGATGTTTGAAAT
TGATATAGCTTTGAAATGACAGCCTAGGGAAACGTGTCATTTGAGCAATT
TCACTGGTTTGAGAGATGCGGAATAGCGTTTGCCGCCCTAATTTTTTTGA
TCTCACGCTCTGAAAACAATTAAAATGCTAGATCCTATCCATCGCACGAA
ATTTAAAAAATTCAAATTTTTCCTTCACTTTTTATGCTGGAGAAAGCTTA
AAGTTGCCTATTTAGCCCTTCGGCCTTTACAGATATCTGTGGTTATGTTG
GATATCTGAAATTGAAAGCTCACCAAATTTGACAGTTATCTTTTCTCTTG
TTGCTCCGGCCTAGGAGCCTTAAATTCTCTCTCGTCCGACGACGACGGTC
AAGACATTTTTATTTTGTTTATCTAATCCGATGATCTATTCCGATTTAAT
AAAAACGGATTATCTGATTCCAATGATACCGTGATTTGATTGGCCGAAAG
TATTTAAGAAAAAGATGGCTACCGAAAGTGGACTAGCTGACTGGACTGTG
TAGCAAATACTGTCAAATCTCAGTGAAAAATTGATCATTTTCATCATTAT
TCATGATGTTTTAGACATGATTTATGAGAAGTTTGATGCATACTGGTTCT
CTAACAATGTGGAAAGACTGAAAGAGGAATTTTGGCCATGAATCGTCTGC
TGATCGAGTGCTTAAATCTTGCATATGGCTAACTTCTCTTCTAAACCTTG
GAACTTGACAATGAAACTTTCAAACACATAGCCATTGGAATTCAAAAGAG
AATACTAAAATTACAACATTACAGTGAAAATTTGAAAACAATCTGAGTAG
TTTTTGTGGTGTTATGTGTATGACTGAAAATGATCCTTTTTTGTATTCAT
CATTGACATTGATGACGTTGATGACACTGGCGACCGTTCCTTTTCTTTTG
ATTTTTCAAACCCGACACAGATTTTTACAAACATATCACTATGAGAATTC
ATTAAAGGATACTAAAACACAATCCCTGTGTAAATTTGAACAAGATTGGA
GAAATTTTCACAGTGTTATGGCTGAAAATGATCGTTTTTGGACTTTGTCG
TAATTTCAATTTCATCGCGGCTGGCAACCGTTCCTTTTGATTTTTCAAAC
CCGACACAGATTTTTTACAAACATATCACTATGAGAATTCAGTAAAGGAT
ACTAAAACACAATTCCTGTGTAAATTTGAACAAGTTTGGAGAAATTTTCA
CAGTGTTATGGCTGAAAATGATTGTTTTTGGACTTTGTTCATCGCGGCTG
GCAACCGTTCCTTTTGATTTTTCAAACCGGACACAGATTTTTTACAAACA
TATCACTATGAGAATTCAGTAAAGGATACTAAAACACAATTCCTGTGTAA
ATTTGAACAAGATCAGAGAAATTTTCAGTGTTATAACTGAAAATTATATT
TTCTGGACTTTGTTGTAATTTCATTGGCTGGGGCGACTGATCCTTTTGAA
GATTTTTCAAACCCGAAACAGGTTTTTTCCAAATATACCAATATTTATTA
CATACACACTATTGTACCATTTTATTTGGTTTATCCTACTCTCCTCCAAG
TATTATCCCAACAAAAAAAATAATGCTTAGCTAAAAGCCGTGGCCTCTAA
TTTAGGCTATTTTTCTCCATAAAATTTTATCCAGACAATCAAATCAACAG
CGCATCATGGCTTCGCTAATTGGCAAGTTTAGAAAAAAATAAATTTATAA
GAACTTGGAAATATTGACTTCTAAATGTTTATCTTCTTTAGCTCCGATTT
GAACTTTTTAGTCAAGGATGAGTGGGCGGGGGGTGGGGTTGGTTCTTTAG
GCAAGAAAGTGCTTGTTTAATCACTTAGAAAAGCTAAACTTCCAGCTGGT
TTATTTATTTGTTAAGATTATTTCTCATACTCGCTCTGCAATAGAATTAT
TACTTTGCTTTCTGATCTGTTCTGATTAGTATTTTGTGGGCAAGGTTCTA
ACACAACTAACTCAACAAATTCATCTTTCACATCTTTTAATCTCTTAAGC
CGGAGCTTCCAGCGCAGCTGGTTTATTTGAGTTTCCATTGTGAGGGTACA
AGGAATCAAGCCAAATTGCTCTGCTGCTTCTTTTGAACTGGTTCTAAATC
AGGAAGATATTTTCCTTTTAATATCAACTATCAAAATTGGATGGCATTTT
GGGGGAAGGATCTAAAACAGGGATCGACAAAAAAAATTGGGCACGCAAAG
ATATTATACTCTCACATCAATTTCTCTAATTTTCTTTTGGAGGGCATATT
ATGTAGTTTTCGATATACCTCTGGGAATTCATGTTTTTAGAATTTACTGG
TATTTATAATTATGTATGATAAAATCTAGTTGAAATTGTAGGTTTTATTT
TGATATCTTTATACTTTATACTTGTTGATTTGTTTTTTGAAATTCAATCA
CCTAAACCGTATAAAAACCCTGGTCTGGAAGACTTTCAATTCTTTCCATT
TTTCCAATACTTTTTTTTTGTAGCATATGGGAAAATCGGGTCGAGGCTCA
ATATGCTTAGCAAAATCTCATGTTGTTACACCTTACTTTATATTGGAGAG
TCTTCGATATTGTTGACGTTTTCCAAGCTCGTGGAACATTTTGCCAGTTC
TGACCTCCTTTTGGGTCTTTTCTGCTTCCGTAACTTCCTGAATTATAAAA
AATATGATTTATATTATGATTCTTTTATATATAATTAAATTATTTGTTCA
AATTTAAAGAAAATTAACAGAATTTTTGCTATCTTGATCGACATAAATTA
GAAGGGAAAAAAGGTGAATTTAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00021934	TCONS_00021934	Clytia hemisphaerica	transcript
TCONS_00021933	TCONS_00021933	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00021933-protein	TCONS_00021933-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000400	supercontig	sc0000400:135723..145446 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.07	12.95	8.26	4.68	1.09	1.3	2.18	1.75	3.2	2.14	1.37	2.2	3.16	4.29	15.13	16.73	25.33	25.72	4.42	3.12	18.06	17.33	20.67	17.88	10.97	12.88	25.24	19.58	13.93	11.53

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XLOC_012306 (gene) - C. hemisphaerica